RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
CLDN11-204ENST00000477531 CAMSAP1Q5T5Y3 1602 aa24.42■■□□□ 1.5
CLDN11-204ENST00000477531 PTPN23Q9H3S7 1636 aa24.42■■□□□ 1.5
CLDN11-204ENST00000477531 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
CLDN11-204ENST00000477531 FGD6Q6ZV73 1430 aa24.4■■□□□ 1.5
CLDN11-204ENST00000477531 TNRQ92752 1358 aa24.4■■□□□ 1.5
CLDN11-204ENST00000477531 CEP170BQ9Y4F5 1589 aaPredicted RBP24.39■■□□□ 1.5
CLDN11-204ENST00000477531 FBXO31Q5XUX0 539 aaPredicted RBP24.39■■□□□ 1.49
CLDN11-204ENST00000477531 PZPP20742 1482 aa24.38■■□□□ 1.49
CLDN11-204ENST00000477531 ABCC5O15440 1437 aa24.38■■□□□ 1.49
CLDN11-204ENST00000477531 PKD2Q13563 968 aa24.38■■□□□ 1.49
CLDN11-204ENST00000477531 DUOX2Q9NRD8 1548 aa24.38■■□□□ 1.49
CLDN11-204ENST00000477531 NCKAP5LQ9HCH0 1330 aa24.37■■□□□ 1.49
CLDN11-204ENST00000477531 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
CLDN11-204ENST00000477531 SHANK2Q9UPX8 1470 aa24.37■■□□□ 1.49
CLDN11-204ENST00000477531 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
CLDN11-204ENST00000477531 KIF15Q9NS87 1388 aa24.36■■□□□ 1.49
CLDN11-204ENST00000477531 EIF2AK4Q9P2K8 1649 aaKnown RBP24.35■■□□□ 1.49
CLDN11-204ENST00000477531 A2ML1A8K2U0 1454 aa24.35■■□□□ 1.49
CLDN11-204ENST00000477531 PLA2R1Q13018 1463 aa24.35■■□□□ 1.49
CLDN11-204ENST00000477531 DAPK1P53355 1430 aa24.35■■□□□ 1.49
CLDN11-204ENST00000477531 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
CLDN11-204ENST00000477531 RNF17Q9BXT8 1623 aaKnown RBP24.34■■□□□ 1.49
CLDN11-204ENST00000477531 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
CLDN11-204ENST00000477531 CHIC2Q9UKJ5 165 aa24.31■■□□□ 1.48
CLDN11-204ENST00000477531 ANKRD30AQ9BXX3 1397 aa24.3■■□□□ 1.48
CLDN11-204ENST00000477531 DNMT1P26358 1616 aaKnown RBP24.3■■□□□ 1.48
CLDN11-204ENST00000477531 CROCC2H7BZ55 1655 aa24.3■■□□□ 1.48
CLDN11-204ENST00000477531 ABCC3O15438 1527 aa24.3■■□□□ 1.48
CLDN11-204ENST00000477531 ERBINQ96RT1 1412 aa24.29■■□□□ 1.48
CLDN11-204ENST00000477531 THEMISQ8N1K5 641 aaPredicted RBP24.29■■□□□ 1.48
CLDN11-204ENST00000477531 ZC3H13Q5T200 1668 aaKnown RBP24.29■■□□□ 1.48
CLDN11-204ENST00000477531 NLRP1Q9C000 1473 aa24.27■■□□□ 1.48
CLDN11-204ENST00000477531 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLDN11-204ENST00000477531 KANK1Q14678 1352 aa24.25■■□□□ 1.47
CLDN11-204ENST00000477531 ANKLE2Q86XL3 938 aa24.23■■□□□ 1.47
CLDN11-204ENST00000477531 MROH1Q8NDA8 1641 aa24.22■■□□□ 1.47
CLDN11-204ENST00000477531 UGGT1Q9NYU2 1555 aa24.2■■□□□ 1.47
CLDN11-204ENST00000477531 ERVK-7P63135 1459 aa24.19■■□□□ 1.46
CLDN11-204ENST00000477531 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLDN11-204ENST00000477531 ZNF335Q9H4Z2 1342 aaPredicted RBP24.19■■□□□ 1.46
CLDN11-204ENST00000477531 LTBP4Q8N2S1 1624 aa24.19■■□□□ 1.46
CLDN11-204ENST00000477531 SPATA31D1Q6ZQQ2 1576 aa24.19■■□□□ 1.46
CLDN11-204ENST00000477531 CEP152O94986 1710 aa24.18■■□□□ 1.46
CLDN11-204ENST00000477531 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
CLDN11-204ENST00000477531 ARHGAP31Q2M1Z3 1444 aa24.16■■□□□ 1.46
CLDN11-204ENST00000477531 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
CLDN11-204ENST00000477531 IQSEC2Q5JU85 1478 aa24.15■■□□□ 1.46
CLDN11-204ENST00000477531 CFAP65Q6ZU64 1925 aaKnown RBP24.14■■□□□ 1.46
CLDN11-204ENST00000477531 POLR1AO95602 1720 aaPredicted RBP24.13■■□□□ 1.45
CLDN11-204ENST00000477531 DEPDC5O75140 1603 aa24.12■■□□□ 1.45
CLDN11-204ENST00000477531 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
CLDN11-204ENST00000477531 PPARGC1BQ86YN6 1023 aaKnown RBP24.08■■□□□ 1.45
CLDN11-204ENST00000477531 STAG3Q9UJ98 1225 aa24.08■■□□□ 1.45
CLDN11-204ENST00000477531 NPHP4O75161 1426 aaPredicted RBP24.08■■□□□ 1.44
CLDN11-204ENST00000477531 NEURL4Q96JN8 1562 aa24.08■■□□□ 1.44
CLDN11-204ENST00000477531 LMTK2Q8IWU2 1503 aa24.06■■□□□ 1.44
CLDN11-204ENST00000477531 MED14O60244 1454 aa24.06■■□□□ 1.44
CLDN11-204ENST00000477531 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
CLDN11-204ENST00000477531 EID1Q9Y6B2 187 aa24.03■■□□□ 1.44
CLDN11-204ENST00000477531 VWDEQ8N2E2 1590 aa24.03■■□□□ 1.44
CLDN11-204ENST00000477531 ITGAEP38570 1179 aa24.02■■□□□ 1.44
CLDN11-204ENST00000477531 TXNDC2Q86VQ3 553 aa24.02■■□□□ 1.44
CLDN11-204ENST00000477531 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
CLDN11-204ENST00000477531 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
CLDN11-204ENST00000477531 CPS1P31327 1500 aa24■■□□□ 1.43
CLDN11-204ENST00000477531 IQGAP1P46940 1657 aa23.99■■□□□ 1.43
CLDN11-204ENST00000477531 IDI1Q13907 227 aa23.98■■□□□ 1.43
CLDN11-204ENST00000477531 SLC52A1Q9NWF4 448 aa23.98■■□□□ 1.43
CLDN11-204ENST00000477531 SCAF11Q99590 1463 aaKnown RBP23.98■■□□□ 1.43
CLDN11-204ENST00000477531 EFCAB6Q5THR3 1501 aa23.98■■□□□ 1.43
CLDN11-204ENST00000477531 SLIT1O75093 1534 aa23.95■■□□□ 1.43
CLDN11-204ENST00000477531 LTKP29376 864 aa23.95■■□□□ 1.42
CLDN11-204ENST00000477531 PIK3C2BO00750 1634 aa23.95■■□□□ 1.42
CLDN11-204ENST00000477531 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
CLDN11-204ENST00000477531 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
CLDN11-204ENST00000477531 NOS1P29475 1434 aa23.94■■□□□ 1.42
CLDN11-204ENST00000477531 TMEM2Q9UHN6 1383 aa23.94■■□□□ 1.42
CLDN11-204ENST00000477531 TOM1O60784 492 aa23.93■■□□□ 1.42
CLDN11-204ENST00000477531 SYNMO15061 1565 aa23.9■■□□□ 1.42
CLDN11-204ENST00000477531 SCAF1Q9H7N4 1312 aaKnown RBP23.89■■□□□ 1.42
CLDN11-204ENST00000477531 TET3O43151 1660 aa23.89■■□□□ 1.41
CLDN11-204ENST00000477531 KDM5AP29375 1690 aaKnown RBP23.89■■□□□ 1.41
CLDN11-204ENST00000477531 UNC13BO14795 1591 aa23.88■■□□□ 1.41
CLDN11-204ENST00000477531 NUP155O75694 1391 aa23.87■■□□□ 1.41
CLDN11-204ENST00000477531 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
CLDN11-204ENST00000477531 PIP4K2BP78356 416 aa23.85■■□□□ 1.41
CLDN11-204ENST00000477531 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
CLDN11-204ENST00000477531 BCANQ96GW7 911 aa23.84■■□□□ 1.41
CLDN11-204ENST00000477531 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
CLDN11-204ENST00000477531 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.41
CLDN11-204ENST00000477531 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
CLDN11-204ENST00000477531 IQGAP3Q86VI3 1631 aa23.8■■□□□ 1.4
CLDN11-204ENST00000477531 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
CLDN11-204ENST00000477531 DISP3Q9P2K9 1392 aa23.79■■□□□ 1.4
CLDN11-204ENST00000477531 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
CLDN11-204ENST00000477531 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
CLDN11-204ENST00000477531 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
CLDN11-204ENST00000477531 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.76■■□□□ 1.39
CLDN11-204ENST00000477531 E9PCH4 1651 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms