RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
XRN1-211ENST00000477237 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
XRN1-211ENST00000477237 LCE2BO14633 110 aa9.9□□□□□ -0.82
XRN1-211ENST00000477237 KCNC4Q03721 635 aa9.9□□□□□ -0.82
XRN1-211ENST00000477237 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
XRN1-211ENST00000477237 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
XRN1-211ENST00000477237 NYAP1Q6ZVC0 841 aa9.89□□□□□ -0.83
XRN1-211ENST00000477237 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
XRN1-211ENST00000477237 MFSD10Q14728 455 aa9.86□□□□□ -0.83
XRN1-211ENST00000477237 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
XRN1-211ENST00000477237 SEPT9Q9UHD8 586 aaPredicted RBP9.86□□□□□ -0.83
XRN1-211ENST00000477237 FBXW7Q969H0 707 aa9.85□□□□□ -0.83
XRN1-211ENST00000477237 PHF14O94880 888 aa9.84□□□□□ -0.83
XRN1-211ENST00000477237 ONECUT3O60422 494 aaPredicted RBP9.83□□□□□ -0.84
XRN1-211ENST00000477237 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
XRN1-211ENST00000477237 TRAF7Q6Q0C0 670 aa9.82□□□□□ -0.84
XRN1-211ENST00000477237 GTPBP6O43824 516 aaPredicted RBP9.81□□□□□ -0.84
XRN1-211ENST00000477237 GFRA3O60609 400 aa9.81□□□□□ -0.84
XRN1-211ENST00000477237 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
XRN1-211ENST00000477237 C6orf132Q5T0Z8 1188 aa9.8□□□□□ -0.84
XRN1-211ENST00000477237 TSR3Q9UJK0 312 aaKnown RBP9.8□□□□□ -0.84
XRN1-211ENST00000477237 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
XRN1-211ENST00000477237 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
XRN1-211ENST00000477237 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
XRN1-211ENST00000477237 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
XRN1-211ENST00000477237 EPAS1Q99814 870 aa9.75□□□□□ -0.85
XRN1-211ENST00000477237 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
XRN1-211ENST00000477237 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
XRN1-211ENST00000477237 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
XRN1-211ENST00000477237 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
XRN1-211ENST00000477237 NRG2O14511 850 aaPredicted RBP9.71□□□□□ -0.86
XRN1-211ENST00000477237 TSKSQ9UJT2 592 aa9.7□□□□□ -0.86
XRN1-211ENST00000477237 DPYSL4O14531 572 aa9.69□□□□□ -0.86
XRN1-211ENST00000477237 PPP4CP60510 307 aa9.69□□□□□ -0.86
XRN1-211ENST00000477237 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
XRN1-211ENST00000477237 DDX12PQ92771 950 aa9.68□□□□□ -0.86
XRN1-211ENST00000477237 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
XRN1-211ENST00000477237 PACS2Q86VP3 889 aa9.66□□□□□ -0.86
XRN1-211ENST00000477237 TSR1Q2NL82 804 aaKnown RBP9.65□□□□□ -0.86
XRN1-211ENST00000477237 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.86
XRN1-211ENST00000477237 MTRQ99707 1265 aa9.65□□□□□ -0.86
XRN1-211ENST00000477237 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
XRN1-211ENST00000477237 SMAPO00193 183 aa9.64□□□□□ -0.87
XRN1-211ENST00000477237 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
XRN1-211ENST00000477237 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
XRN1-211ENST00000477237 EN1Q05925 392 aaPredicted RBP9.62□□□□□ -0.87
XRN1-211ENST00000477237 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
XRN1-211ENST00000477237 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
XRN1-211ENST00000477237 FAM198AQ9UFP1 575 aa9.61□□□□□ -0.87
XRN1-211ENST00000477237 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
XRN1-211ENST00000477237 MAP3K7O43318 606 aa9.6□□□□□ -0.87
XRN1-211ENST00000477237 NBR1Q14596 966 aa9.6□□□□□ -0.87
XRN1-211ENST00000477237 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
XRN1-211ENST00000477237 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
XRN1-211ENST00000477237 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
XRN1-211ENST00000477237 PRSS12P56730 875 aa9.56□□□□□ -0.88
XRN1-211ENST00000477237 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
XRN1-211ENST00000477237 APLP1P51693 650 aa9.55□□□□□ -0.88
XRN1-211ENST00000477237 TATDN2Q93075 761 aa9.54□□□□□ -0.88
XRN1-211ENST00000477237 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
XRN1-211ENST00000477237 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
XRN1-211ENST00000477237 PDIA6Q15084 440 aa9.52□□□□□ -0.89
XRN1-211ENST00000477237 NBPF26B4DH59 902 aa9.51□□□□□ -0.89
XRN1-211ENST00000477237 RNF40O75150 1001 aa9.51□□□□□ -0.89
XRN1-211ENST00000477237 COPS2P61201 443 aa9.48□□□□□ -0.89
XRN1-211ENST00000477237 TRIM67Q6ZTA4 783 aa9.48□□□□□ -0.89
XRN1-211ENST00000477237 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
XRN1-211ENST00000477237 CERKQ8TCT0 537 aa9.48□□□□□ -0.89
XRN1-211ENST00000477237 SPDYE16A6NNV3 312 aaPredicted RBP9.46□□□□□ -0.9
XRN1-211ENST00000477237 GGCXP38435 758 aa9.46□□□□□ -0.9
XRN1-211ENST00000477237 HDGFP51858 240 aaKnown RBP9.45□□□□□ -0.9
XRN1-211ENST00000477237 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
XRN1-211ENST00000477237 DCAF8L2P0C7V8 631 aa9.44□□□□□ -0.9
XRN1-211ENST00000477237 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
XRN1-211ENST00000477237 CDHR5Q9HBB8 845 aa9.44□□□□□ -0.9
XRN1-211ENST00000477237 POTECB2RU33 542 aa9.43□□□□□ -0.9
XRN1-211ENST00000477237 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
XRN1-211ENST00000477237 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
XRN1-211ENST00000477237 ZPR1O75312 459 aa9.42□□□□□ -0.9
XRN1-211ENST00000477237 MYT1Q01538 1121 aa9.42□□□□□ -0.9
XRN1-211ENST00000477237 SLC19A1P41440 591 aa9.4□□□□□ -0.9
XRN1-211ENST00000477237 RBM27Q9P2N5 1060 aaKnown RBP9.4□□□□□ -0.9
XRN1-211ENST00000477237 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
XRN1-211ENST00000477237 OSBPP22059 807 aa9.39□□□□□ -0.91
XRN1-211ENST00000477237 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
XRN1-211ENST00000477237 SLF2Q8IX21 1173 aa9.39□□□□□ -0.91
XRN1-211ENST00000477237 DGAT1O75907 488 aa9.38□□□□□ -0.91
XRN1-211ENST00000477237 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
XRN1-211ENST00000477237 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
XRN1-211ENST00000477237 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
XRN1-211ENST00000477237 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
XRN1-211ENST00000477237 ZNF598Q86UK7 904 aaKnown RBP9.35□□□□□ -0.91
XRN1-211ENST00000477237 PRR20EP86478 221 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 PRR20CP86479 221 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 PRR20DP86480 221 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 PRR20BP86481 221 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 PRR20AP86496 221 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
XRN1-211ENST00000477237 NPDC1Q9NQX5 325 aaPredicted RBP9.34□□□□□ -0.91
XRN1-211ENST00000477237 PCDHB3Q9Y5E6 796 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms