RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-211ENST00000476855 ATP7AQ04656 1500 aa24■■□□□ 1.43
PSMD4-211ENST00000476855 ABCA6Q8N139 1617 aa23.99■■□□□ 1.43
PSMD4-211ENST00000476855 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
PSMD4-211ENST00000476855 ROCK1Q13464 1354 aa23.98■■□□□ 1.43
PSMD4-211ENST00000476855 AGLP35573 1532 aa23.98■■□□□ 1.43
PSMD4-211ENST00000476855 RTEL1-TNFRSF6BF6WH68 1400 aa23.97■■□□□ 1.43
PSMD4-211ENST00000476855 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
PSMD4-211ENST00000476855 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
PSMD4-211ENST00000476855 NCOA1Q15788 1441 aa23.94■■□□□ 1.42
PSMD4-211ENST00000476855 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
PSMD4-211ENST00000476855 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
PSMD4-211ENST00000476855 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
PSMD4-211ENST00000476855 CHIC2Q9UKJ5 165 aa23.93■■□□□ 1.42
PSMD4-211ENST00000476855 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
PSMD4-211ENST00000476855 NAIPQ13075 1403 aa23.92■■□□□ 1.42
PSMD4-211ENST00000476855 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
PSMD4-211ENST00000476855 SPAG9O60271 1321 aaKnown RBP23.9■■□□□ 1.42
PSMD4-211ENST00000476855 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
PSMD4-211ENST00000476855 NPATQ14207 1427 aa23.85■■□□□ 1.41
PSMD4-211ENST00000476855 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
PSMD4-211ENST00000476855 KIF15Q9NS87 1388 aa23.85■■□□□ 1.41
PSMD4-211ENST00000476855 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
PSMD4-211ENST00000476855 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
PSMD4-211ENST00000476855 ZMYM3Q14202 1370 aa23.82■■□□□ 1.4
PSMD4-211ENST00000476855 EIF2AK4Q9P2K8 1649 aaKnown RBP23.82■■□□□ 1.4
PSMD4-211ENST00000476855 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
PSMD4-211ENST00000476855 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
PSMD4-211ENST00000476855 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
PSMD4-211ENST00000476855 ZNF335Q9H4Z2 1342 aaPredicted RBP23.79■■□□□ 1.4
PSMD4-211ENST00000476855 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
PSMD4-211ENST00000476855 UBAP1LF5GYI3 381 aa23.78■■□□□ 1.4
PSMD4-211ENST00000476855 ERBINQ96RT1 1412 aa23.77■■□□□ 1.4
PSMD4-211ENST00000476855 A2MP01023 1474 aa23.76■■□□□ 1.39
PSMD4-211ENST00000476855 UNC13BO14795 1591 aa23.76■■□□□ 1.39
PSMD4-211ENST00000476855 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
PSMD4-211ENST00000476855 PKD2Q13563 968 aa23.74■■□□□ 1.39
PSMD4-211ENST00000476855 DHX29Q7Z478 1369 aaKnown RBP23.73■■□□□ 1.39
PSMD4-211ENST00000476855 RNF17Q9BXT8 1623 aaKnown RBP23.73■■□□□ 1.39
PSMD4-211ENST00000476855 PLA2R1Q13018 1463 aa23.72■■□□□ 1.39
PSMD4-211ENST00000476855 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
PSMD4-211ENST00000476855 HRCP23327 699 aa23.7■■□□□ 1.38
PSMD4-211ENST00000476855 ZNF142P52746 1687 aaPredicted RBP23.69■■□□□ 1.38
PSMD4-211ENST00000476855 CLTCQ00610 1675 aaKnown RBP23.69■■□□□ 1.38
PSMD4-211ENST00000476855 MYO3AQ8NEV4 1616 aa23.69■■□□□ 1.38
PSMD4-211ENST00000476855 CEP170BQ9Y4F5 1589 aaPredicted RBP23.68■■□□□ 1.38
PSMD4-211ENST00000476855 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
PSMD4-211ENST00000476855 GGT6Q6P531 493 aa23.66■■□□□ 1.38
PSMD4-211ENST00000476855 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
PSMD4-211ENST00000476855 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
PSMD4-211ENST00000476855 PPP6R1Q9UPN7 881 aa23.65■■□□□ 1.38
PSMD4-211ENST00000476855 VWDEQ8N2E2 1590 aa23.63■■□□□ 1.37
PSMD4-211ENST00000476855 CEP152O94986 1710 aa23.62■■□□□ 1.37
PSMD4-211ENST00000476855 PZPP20742 1482 aa23.59■■□□□ 1.37
PSMD4-211ENST00000476855 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
PSMD4-211ENST00000476855 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
PSMD4-211ENST00000476855 ZC3H13Q5T200 1668 aaKnown RBP23.57■■□□□ 1.36
PSMD4-211ENST00000476855 SCAF1Q9H7N4 1312 aaKnown RBP23.57■■□□□ 1.36
PSMD4-211ENST00000476855 FAM135AQ9P2D6 1515 aa23.56■■□□□ 1.36
PSMD4-211ENST00000476855 KIF3BO15066 747 aa23.56■■□□□ 1.36
PSMD4-211ENST00000476855 TET3O43151 1660 aa23.55■■□□□ 1.36
PSMD4-211ENST00000476855 HSPA1LP34931 641 aa23.55■■□□□ 1.36
PSMD4-211ENST00000476855 DHX57Q6P158 1386 aaKnown RBP23.54■■□□□ 1.36
PSMD4-211ENST00000476855 PIP4K2BP78356 416 aa23.54■■□□□ 1.36
PSMD4-211ENST00000476855 TOM1O60784 492 aa23.53■■□□□ 1.36
PSMD4-211ENST00000476855 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
PSMD4-211ENST00000476855 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
PSMD4-211ENST00000476855 NUP155O75694 1391 aa23.51■■□□□ 1.35
PSMD4-211ENST00000476855 E9PCH4 1651 aa23.51■■□□□ 1.35
PSMD4-211ENST00000476855 CPS1P31327 1500 aa23.5■■□□□ 1.35
PSMD4-211ENST00000476855 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
PSMD4-211ENST00000476855 ABCC3O15438 1527 aa23.49■■□□□ 1.35
PSMD4-211ENST00000476855 FBXO31Q5XUX0 539 aaPredicted RBP23.47■■□□□ 1.35
PSMD4-211ENST00000476855 TNRQ92752 1358 aa23.47■■□□□ 1.35
PSMD4-211ENST00000476855 EFCAB6Q5THR3 1501 aa23.46■■□□□ 1.35
PSMD4-211ENST00000476855 NEURL4Q96JN8 1562 aa23.46■■□□□ 1.35
PSMD4-211ENST00000476855 POLR1AO95602 1720 aaPredicted RBP23.45■■□□□ 1.34
PSMD4-211ENST00000476855 KANK1Q14678 1352 aa23.45■■□□□ 1.34
PSMD4-211ENST00000476855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.345e-10■■□□□ 13.8
PSMD4-211ENST00000476855 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
PSMD4-211ENST00000476855 ANKLE2Q86XL3 938 aa23.43■■□□□ 1.34
PSMD4-211ENST00000476855 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
PSMD4-211ENST00000476855 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
PSMD4-211ENST00000476855 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
PSMD4-211ENST00000476855 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
PSMD4-211ENST00000476855 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
PSMD4-211ENST00000476855 PHF23Q9BUL5 403 aaPredicted RBP23.38■■□□□ 1.33
PSMD4-211ENST00000476855 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
PSMD4-211ENST00000476855 MED14O60244 1454 aa23.35■■□□□ 1.33
PSMD4-211ENST00000476855 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
PSMD4-211ENST00000476855 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
PSMD4-211ENST00000476855 UGGT1Q9NYU2 1555 aa23.34■■□□□ 1.33
PSMD4-211ENST00000476855 ARHGAP31Q2M1Z3 1444 aa23.33■■□□□ 1.33
PSMD4-211ENST00000476855 CCER1Q8TC90 406 aaPredicted RBP23.33■■□□□ 1.33
PSMD4-211ENST00000476855 ALKQ9UM73 1620 aa23.32■■□□□ 1.32
PSMD4-211ENST00000476855 CLSPNQ9HAW4 1339 aa23.32■■□□□ 1.32
PSMD4-211ENST00000476855 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
PSMD4-211ENST00000476855 FOXD1Q16676 465 aa23.3■■□□□ 1.32
PSMD4-211ENST00000476855 TRPM2O94759 1503 aa23.29■■□□□ 1.32
PSMD4-211ENST00000476855 SYNMO15061 1565 aa23.27■■□□□ 1.32
PSMD4-211ENST00000476855 IQGAP1P46940 1657 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms