RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ABCC5O15440 1437 aa16.82■□□□□ 0.28
SEC13-214ENST00000476597 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
SEC13-214ENST00000476597 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
SEC13-214ENST00000476597 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
SEC13-214ENST00000476597 PKD2Q13563 968 aa16.79■□□□□ 0.28
SEC13-214ENST00000476597 RRP7BPQ9NSQ0 103 aa16.79■□□□□ 0.28
SEC13-214ENST00000476597 KDM5DQ9BY66 1539 aa16.79■□□□□ 0.28
SEC13-214ENST00000476597 TNRQ92752 1358 aa16.78■□□□□ 0.28
SEC13-214ENST00000476597 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
SEC13-214ENST00000476597 PZPP20742 1482 aa16.78■□□□□ 0.28
SEC13-214ENST00000476597 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
SEC13-214ENST00000476597 DAPK1P53355 1430 aa16.77■□□□□ 0.27
SEC13-214ENST00000476597 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
SEC13-214ENST00000476597 KIF15Q9NS87 1388 aa16.77■□□□□ 0.27
SEC13-214ENST00000476597 A2ML1A8K2U0 1454 aa16.76■□□□□ 0.27
SEC13-214ENST00000476597 SHANK2Q9UPX8 1470 aa16.76■□□□□ 0.27
SEC13-214ENST00000476597 DUOX2Q9NRD8 1548 aa16.75■□□□□ 0.27
SEC13-214ENST00000476597 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
SEC13-214ENST00000476597 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
SEC13-214ENST00000476597 CEP170BQ9Y4F5 1589 aaPredicted RBP16.75■□□□□ 0.27
SEC13-214ENST00000476597 MYO3AQ8NEV4 1616 aa16.74■□□□□ 0.27
SEC13-214ENST00000476597 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SEC13-214ENST00000476597 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
SEC13-214ENST00000476597 FAM50AQ14320 339 aaKnown RBP16.72■□□□□ 0.27
SEC13-214ENST00000476597 THEMISQ8N1K5 641 aaPredicted RBP16.72■□□□□ 0.27
SEC13-214ENST00000476597 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
SEC13-214ENST00000476597 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
SEC13-214ENST00000476597 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
SEC13-214ENST00000476597 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SEC13-214ENST00000476597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
SEC13-214ENST00000476597 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
SEC13-214ENST00000476597 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
SEC13-214ENST00000476597 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEC13-214ENST00000476597 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
SEC13-214ENST00000476597 MROH1Q8NDA8 1641 aa16.68■□□□□ 0.26
SEC13-214ENST00000476597 ANKLE2Q86XL3 938 aa16.68■□□□□ 0.26
SEC13-214ENST00000476597 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
SEC13-214ENST00000476597 ARHGAP31Q2M1Z3 1444 aa16.66■□□□□ 0.26
SEC13-214ENST00000476597 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
SEC13-214ENST00000476597 ERVK-7P63135 1459 aa16.65■□□□□ 0.26
SEC13-214ENST00000476597 KANK1Q14678 1352 aa16.64■□□□□ 0.26
SEC13-214ENST00000476597 ADGRL2O95490 1459 aa16.64■□□□□ 0.25
SEC13-214ENST00000476597 CROCC2H7BZ55 1655 aa16.64■□□□□ 0.25
SEC13-214ENST00000476597 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
SEC13-214ENST00000476597 ZC3H13Q5T200 1668 aaKnown RBP16.63■□□□□ 0.25
SEC13-214ENST00000476597 PRDM15P57071 1507 aaPredicted RBP16.62■□□□□ 0.25
SEC13-214ENST00000476597 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
SEC13-214ENST00000476597 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
SEC13-214ENST00000476597 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
SEC13-214ENST00000476597 MED14O60244 1454 aa16.59■□□□□ 0.25
SEC13-214ENST00000476597 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
SEC13-214ENST00000476597 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.24
SEC13-214ENST00000476597 DEPDC5O75140 1603 aa16.57■□□□□ 0.24
SEC13-214ENST00000476597 VWDEQ8N2E2 1590 aa16.57■□□□□ 0.24
SEC13-214ENST00000476597 NEURL4Q96JN8 1562 aa16.57■□□□□ 0.24
SEC13-214ENST00000476597 IDI1Q13907 227 aa16.57■□□□□ 0.24
SEC13-214ENST00000476597 CEP152O94986 1710 aa16.56■□□□□ 0.24
SEC13-214ENST00000476597 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
SEC13-214ENST00000476597 LTKP29376 864 aa16.55■□□□□ 0.24
SEC13-214ENST00000476597 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
SEC13-214ENST00000476597 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
SEC13-214ENST00000476597 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
SEC13-214ENST00000476597 NOS1P29475 1434 aa16.53■□□□□ 0.24
SEC13-214ENST00000476597 ITGAEP38570 1179 aa16.52■□□□□ 0.24
SEC13-214ENST00000476597 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
SEC13-214ENST00000476597 ARHGAP23Q9P227 1491 aa16.51■□□□□ 0.23
SEC13-214ENST00000476597 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
SEC13-214ENST00000476597 TMEM2Q9UHN6 1383 aa16.5■□□□□ 0.23
SEC13-214ENST00000476597 SLIT1O75093 1534 aa16.5■□□□□ 0.23
SEC13-214ENST00000476597 SCAF11Q99590 1463 aaKnown RBP16.49■□□□□ 0.23
SEC13-214ENST00000476597 POLR1AO95602 1720 aaPredicted RBP16.49■□□□□ 0.23
SEC13-214ENST00000476597 CPS1P31327 1500 aa16.49■□□□□ 0.23
SEC13-214ENST00000476597 CFAP65Q6ZU64 1925 aaKnown RBP16.49■□□□□ 0.23
SEC13-214ENST00000476597 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
SEC13-214ENST00000476597 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
SEC13-214ENST00000476597 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
SEC13-214ENST00000476597 TOM1O60784 492 aa16.46■□□□□ 0.23
SEC13-214ENST00000476597 SYNMO15061 1565 aa16.44■□□□□ 0.22
SEC13-214ENST00000476597 NUP155O75694 1391 aa16.44■□□□□ 0.22
SEC13-214ENST00000476597 PIK3C2BO00750 1634 aa16.44■□□□□ 0.22
SEC13-214ENST00000476597 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
SEC13-214ENST00000476597 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
SEC13-214ENST00000476597 UNC13BO14795 1591 aa16.4■□□□□ 0.22
SEC13-214ENST00000476597 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
SEC13-214ENST00000476597 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
SEC13-214ENST00000476597 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
SEC13-214ENST00000476597 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
SEC13-214ENST00000476597 TET3O43151 1660 aa16.39■□□□□ 0.21
SEC13-214ENST00000476597 KDM5AP29375 1690 aaKnown RBP16.38■□□□□ 0.21
SEC13-214ENST00000476597 KCNA6P17658 529 aa16.38■□□□□ 0.21
SEC13-214ENST00000476597 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
SEC13-214ENST00000476597 ADGRB3O60242 1522 aa16.37■□□□□ 0.21
SEC13-214ENST00000476597 CHGAP10645 457 aaKnown RBP16.37■□□□□ 0.21
SEC13-214ENST00000476597 HSPA1LP34931 641 aa16.36■□□□□ 0.21
SEC13-214ENST00000476597 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
SEC13-214ENST00000476597 BCANQ96GW7 911 aa16.35■□□□□ 0.21
SEC13-214ENST00000476597 ZFYVE9O95405 1425 aa16.35■□□□□ 0.21
SEC13-214ENST00000476597 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
SEC13-214ENST00000476597 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
SEC13-214ENST00000476597 NAIPQ13075 1403 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms