RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 MLH3Q9UHC1 1453 aa29.26■■■□□ 2.27
ITGA4-207ENST00000476089 HECW2Q9P2P5 1572 aa29.23■■■□□ 2.27
ITGA4-207ENST00000476089 EIF2AK4Q9P2K8 1649 aaKnown RBP29.23■■■□□ 2.27
ITGA4-207ENST00000476089 TEX14Q8IWB6 1497 aa29.2■■■□□ 2.27
ITGA4-207ENST00000476089 KIF3BO15066 747 aa29.2■■■□□ 2.27
ITGA4-207ENST00000476089 DEPDC5O75140 1603 aa29.2■■■□□ 2.27
ITGA4-207ENST00000476089 KANK1Q14678 1352 aa29.2■■■□□ 2.26
ITGA4-207ENST00000476089 RAPGEF3O95398 923 aa29.19■■■□□ 2.26
ITGA4-207ENST00000476089 A2MP01023 1474 aa29.18■■■□□ 2.26
ITGA4-207ENST00000476089 TSPOAP1O95153 1857 aa29.15■■■□□ 2.26
ITGA4-207ENST00000476089 RICTORQ6R327 1708 aa29.14■■■□□ 2.26
ITGA4-207ENST00000476089 CCDC144AA2RUR9 1427 aa29.13■■■□□ 2.25
ITGA4-207ENST00000476089 PRDM15P57071 1507 aaPredicted RBP29.09■■■□□ 2.25
ITGA4-207ENST00000476089 ABCA6Q8N139 1617 aa29.09■■■□□ 2.25
ITGA4-207ENST00000476089 PPRC1Q5VV67 1664 aaKnown RBP29.08■■■□□ 2.25
ITGA4-207ENST00000476089 VWDEQ8N2E2 1590 aa29.08■■■□□ 2.25
ITGA4-207ENST00000476089 TET3O43151 1660 aa29.07■■■□□ 2.24
ITGA4-207ENST00000476089 ATP10AO60312 1499 aa29.07■■■□□ 2.24
ITGA4-207ENST00000476089 KIF13AQ9H1H9 1805 aa29.06■■■□□ 2.24
ITGA4-207ENST00000476089 PLA2R1Q13018 1463 aa29.05■■■□□ 2.24
ITGA4-207ENST00000476089 FRMPD1Q5SYB0 1578 aa29.04■■■□□ 2.24
ITGA4-207ENST00000476089 E9PCH4 1651 aa29.04■■■□□ 2.24
ITGA4-207ENST00000476089 MROH1Q8NDA8 1641 aa29.04■■■□□ 2.24
ITGA4-207ENST00000476089 RNF17Q9BXT8 1623 aaKnown RBP29.04■■■□□ 2.24
ITGA4-207ENST00000476089 DIP2CQ9Y2E4 1556 aa29.02■■■□□ 2.24
ITGA4-207ENST00000476089 NBPF8Q3BBV2 869 aa29.02■■■□□ 2.24
ITGA4-207ENST00000476089 BCORL1Q5H9F3 1711 aa29.01■■■□□ 2.23
ITGA4-207ENST00000476089 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
ITGA4-207ENST00000476089 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
ITGA4-207ENST00000476089 EIF4G2P78344 907 aaKnown RBP eCLIP28.97■■■□□ 2.23
ITGA4-207ENST00000476089 GGT6Q6P531 493 aa28.96■■■□□ 2.23
ITGA4-207ENST00000476089 ZNF326Q5BKZ1 582 aaKnown RBP28.95■■■□□ 2.23
ITGA4-207ENST00000476089 SPHKAPQ2M3C7 1700 aa28.95■■■□□ 2.22
ITGA4-207ENST00000476089 LMTK2Q8IWU2 1503 aa28.95■■■□□ 2.22
ITGA4-207ENST00000476089 YEATS2Q9ULM3 1422 aa28.95■■■□□ 2.22
ITGA4-207ENST00000476089 DCAF11Q8TEB1 546 aa28.94■■■□□ 2.22
ITGA4-207ENST00000476089 TRPM2O94759 1503 aa28.94■■■□□ 2.22
ITGA4-207ENST00000476089 PTPRTO14522 1441 aa28.94■■■□□ 2.22
ITGA4-207ENST00000476089 UHRF1BP1Q6BDS2 1440 aa28.94■■■□□ 2.22
ITGA4-207ENST00000476089 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
ITGA4-207ENST00000476089 KDM2AQ9Y2K7 1162 aa28.92■■■□□ 2.22
ITGA4-207ENST00000476089 RGL3Q3MIN7 710 aa28.91■■■□□ 2.22
ITGA4-207ENST00000476089 HSPA5P11021 654 aaKnown RBP28.9■■■□□ 2.22
ITGA4-207ENST00000476089 CEP152O94986 1710 aa28.9■■■□□ 2.22
ITGA4-207ENST00000476089 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
ITGA4-207ENST00000476089 MIER1Q8N108 512 aa28.83■■■□□ 2.21
ITGA4-207ENST00000476089 RALGAPBQ86X10 1494 aa28.82■■■□□ 2.2
ITGA4-207ENST00000476089 ABCC3O15438 1527 aa28.82■■■□□ 2.2
ITGA4-207ENST00000476089 CLTCL1P53675 1640 aa28.82■■■□□ 2.2
ITGA4-207ENST00000476089 SPATA31E1Q6ZUB1 1445 aa28.8■■■□□ 2.2
ITGA4-207ENST00000476089 DDX10Q13206 875 aaKnown RBP28.8■■■□□ 2.2
ITGA4-207ENST00000476089 REREQ9P2R6 1566 aa28.78■■■□□ 2.2
ITGA4-207ENST00000476089 ZC3H13Q5T200 1668 aaKnown RBP28.77■■■□□ 2.2
ITGA4-207ENST00000476089 PRAG1Q86YV5 1406 aa28.77■■■□□ 2.2
ITGA4-207ENST00000476089 COL17A1Q9UMD9 1497 aaPredicted RBP28.76■■■□□ 2.2
ITGA4-207ENST00000476089 NPATQ14207 1427 aa28.76■■■□□ 2.19
ITGA4-207ENST00000476089 CAMSAP1Q5T5Y3 1602 aa28.76■■■□□ 2.19
ITGA4-207ENST00000476089 STAC3Q96MF2 364 aa28.74■■■□□ 2.19
ITGA4-207ENST00000476089 CARD11Q9BXL7 1154 aa28.74■■■□□ 2.19
ITGA4-207ENST00000476089 NEURL4Q96JN8 1562 aa28.72■■■□□ 2.19
ITGA4-207ENST00000476089 USP47Q96K76 1375 aa28.72■■■□□ 2.19
ITGA4-207ENST00000476089 AGLP35573 1532 aa28.72■■■□□ 2.19
ITGA4-207ENST00000476089 ROCK2O75116 1388 aaKnown RBP28.71■■■□□ 2.19
ITGA4-207ENST00000476089 CNTLNQ9NXG0 1405 aa28.71■■■□□ 2.19
ITGA4-207ENST00000476089 KIF1BO60333 1816 aa28.71■■■□□ 2.19
ITGA4-207ENST00000476089 ARHGEF40Q8TER5 1519 aa28.7■■■□□ 2.18
ITGA4-207ENST00000476089 TRPM1Q7Z4N2 1603 aa28.7■■■□□ 2.18
ITGA4-207ENST00000476089 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
ITGA4-207ENST00000476089 CFAP65Q6ZU64 1925 aaKnown RBP28.68■■■□□ 2.18
ITGA4-207ENST00000476089 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
ITGA4-207ENST00000476089 PPP6R1Q9UPN7 881 aa28.67■■■□□ 2.18
ITGA4-207ENST00000476089 WASHC2AQ641Q2 1341 aa28.65■■■□□ 2.18
ITGA4-207ENST00000476089 TRHP20396 242 aaPredicted RBP28.65■■■□□ 2.18
ITGA4-207ENST00000476089 NOS1P29475 1434 aa28.62■■■□□ 2.17
ITGA4-207ENST00000476089 GPRASP1Q5JY77 1395 aa28.59■■■□□ 2.17
ITGA4-207ENST00000476089 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
ITGA4-207ENST00000476089 CHGAP10645 457 aaKnown RBP28.59■■■□□ 2.17
ITGA4-207ENST00000476089 POLR1AO95602 1720 aaPredicted RBP28.59■■■□□ 2.17
ITGA4-207ENST00000476089 SIGLEC1Q9BZZ2 1709 aa28.58■■■□□ 2.17
ITGA4-207ENST00000476089 LAMC1P11047 1609 aa28.58■■■□□ 2.17
ITGA4-207ENST00000476089 MADDQ8WXG6 1647 aa28.58■■■□□ 2.17
ITGA4-207ENST00000476089 NBPF1Q3BBV0 1214 aa28.57■■■□□ 2.16
ITGA4-207ENST00000476089 DNAJC5Q9H3Z4 198 aa28.57■■■□□ 2.16
ITGA4-207ENST00000476089 ADGRB3O60242 1522 aa28.56■■■□□ 2.16
ITGA4-207ENST00000476089 C11orf95C9JLR9 678 aaPredicted RBP28.56■■■□□ 2.16
ITGA4-207ENST00000476089 MROH2AA6NES4 1674 aa28.55■■■□□ 2.16
ITGA4-207ENST00000476089 MYOM2P54296 1465 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 SYNMO15061 1565 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 KIF7Q2M1P5 1343 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 ANP32CO43423 234 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 MLECQ14165 292 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 SLC52A1Q9NWF4 448 aa28.53■■■□□ 2.16
ITGA4-207ENST00000476089 PIK3C2BO00750 1634 aa28.52■■■□□ 2.16
ITGA4-207ENST00000476089 ARID4BQ4LE39 1312 aaPredicted RBP28.52■■■□□ 2.16
ITGA4-207ENST00000476089 PREX1Q8TCU6 1659 aa28.51■■■□□ 2.15
ITGA4-207ENST00000476089 IFT172Q9UG01 1749 aa28.5■■■□□ 2.15
ITGA4-207ENST00000476089 ESF1Q9H501 851 aaKnown RBP28.5■■■□□ 2.15
ITGA4-207ENST00000476089 CLTCQ00610 1675 aaKnown RBP28.49■■■□□ 2.15
ITGA4-207ENST00000476089 RPGRIP1LQ68CZ1 1315 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms