RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.49
GABRE-207ENST00000476016 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
GABRE-207ENST00000476016 DHX29Q7Z478 1369 aaKnown RBP12.02□□□□□ -0.49
GABRE-207ENST00000476016 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
GABRE-207ENST00000476016 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
GABRE-207ENST00000476016 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
GABRE-207ENST00000476016 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
GABRE-207ENST00000476016 ANKRD30BQ9BXX2 1392 aa11.99□□□□□ -0.49
GABRE-207ENST00000476016 ABCA6Q8N139 1617 aa11.98□□□□□ -0.49
GABRE-207ENST00000476016 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
GABRE-207ENST00000476016 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
GABRE-207ENST00000476016 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
GABRE-207ENST00000476016 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
GABRE-207ENST00000476016 RAPGEF3O95398 923 aa11.97□□□□□ -0.49
GABRE-207ENST00000476016 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
GABRE-207ENST00000476016 A2MP01023 1474 aa11.96□□□□□ -0.49
GABRE-207ENST00000476016 ATP10AO60312 1499 aa11.95□□□□□ -0.5
GABRE-207ENST00000476016 NUP155O75694 1391 aa11.95□□□□□ -0.5
GABRE-207ENST00000476016 PRDM15P57071 1507 aaPredicted RBP11.95□□□□□ -0.5
GABRE-207ENST00000476016 TRIM52Q96A61 297 aa11.94□□□□□ -0.5
GABRE-207ENST00000476016 AGLP35573 1532 aa11.93□□□□□ -0.5
GABRE-207ENST00000476016 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
GABRE-207ENST00000476016 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
GABRE-207ENST00000476016 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
GABRE-207ENST00000476016 TET3O43151 1660 aa11.91□□□□□ -0.5
GABRE-207ENST00000476016 RPRD2Q5VT52 1461 aaKnown RBP11.91□□□□□ -0.5
GABRE-207ENST00000476016 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
GABRE-207ENST00000476016 PLA2R1Q13018 1463 aa11.9□□□□□ -0.5
GABRE-207ENST00000476016 PKD2Q13563 968 aa11.9□□□□□ -0.5
GABRE-207ENST00000476016 PTPRTO14522 1441 aa11.89□□□□□ -0.51
GABRE-207ENST00000476016 E9PCH4 1651 aa11.89□□□□□ -0.51
GABRE-207ENST00000476016 KIF3BO15066 747 aa11.88□□□□□ -0.51
GABRE-207ENST00000476016 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
GABRE-207ENST00000476016 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
GABRE-207ENST00000476016 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
GABRE-207ENST00000476016 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
GABRE-207ENST00000476016 ZC3H13Q5T200 1668 aaKnown RBP11.84□□□□□ -0.51
GABRE-207ENST00000476016 NEURL4Q96JN8 1562 aa11.84□□□□□ -0.51
GABRE-207ENST00000476016 EFCAB6Q5THR3 1501 aa11.84□□□□□ -0.51
GABRE-207ENST00000476016 KANK1Q14678 1352 aa11.83□□□□□ -0.52
GABRE-207ENST00000476016 ABCC3O15438 1527 aa11.83□□□□□ -0.52
GABRE-207ENST00000476016 CEP152O94986 1710 aa11.83□□□□□ -0.52
GABRE-207ENST00000476016 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
GABRE-207ENST00000476016 TRPM2O94759 1503 aa11.81□□□□□ -0.52
GABRE-207ENST00000476016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.522e-7■■■□□ 17.2
GABRE-207ENST00000476016 CAMSAP1Q5T5Y3 1602 aa11.8□□□□□ -0.52
GABRE-207ENST00000476016 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
GABRE-207ENST00000476016 MYT1LQ9UL68 1186 aa11.8□□□□□ -0.52
GABRE-207ENST00000476016 NPATQ14207 1427 aa11.79□□□□□ -0.52
GABRE-207ENST00000476016 TRHP20396 242 aaPredicted RBP11.79□□□□□ -0.52
GABRE-207ENST00000476016 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
GABRE-207ENST00000476016 NOS1P29475 1434 aa11.78□□□□□ -0.52
GABRE-207ENST00000476016 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
GABRE-207ENST00000476016 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
GABRE-207ENST00000476016 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.52
GABRE-207ENST00000476016 PIK3C2BO00750 1634 aa11.77□□□□□ -0.53
GABRE-207ENST00000476016 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
GABRE-207ENST00000476016 GGT6Q6P531 493 aa11.76□□□□□ -0.53
GABRE-207ENST00000476016 WASHC2CQ9Y4E1 1318 aa11.76□□□□□ -0.53
GABRE-207ENST00000476016 CCDC144AA2RUR9 1427 aa11.76□□□□□ -0.53
GABRE-207ENST00000476016 CLTCL1P53675 1640 aa11.75□□□□□ -0.53
GABRE-207ENST00000476016 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
GABRE-207ENST00000476016 CNTLNQ9NXG0 1405 aa11.75□□□□□ -0.53
GABRE-207ENST00000476016 MROH2AA6NES4 1674 aa11.73□□□□□ -0.53
GABRE-207ENST00000476016 KIF1BO60333 1816 aa11.73□□□□□ -0.53
GABRE-207ENST00000476016 PREX1Q8TCU6 1659 aa11.72□□□□□ -0.53
GABRE-207ENST00000476016 SYNMO15061 1565 aa11.72□□□□□ -0.53
GABRE-207ENST00000476016 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.53
GABRE-207ENST00000476016 NBPF8Q3BBV2 869 aa11.71□□□□□ -0.53
GABRE-207ENST00000476016 IFT172Q9UG01 1749 aa11.71□□□□□ -0.54
GABRE-207ENST00000476016 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.54
GABRE-207ENST00000476016 SLC52A1Q9NWF4 448 aa11.69□□□□□ -0.54
GABRE-207ENST00000476016 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
GABRE-207ENST00000476016 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
GABRE-207ENST00000476016 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 NRXN1Q9ULB1 1477 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 KDM5AP29375 1690 aaKnown RBP11.67□□□□□ -0.54
GABRE-207ENST00000476016 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
GABRE-207ENST00000476016 TMEM131LA2VDJ0 1609 aa11.66□□□□□ -0.54
GABRE-207ENST00000476016 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
GABRE-207ENST00000476016 PPLO60437 1756 aa11.66□□□□□ -0.54
GABRE-207ENST00000476016 KIAA1210Q9ULL0 1709 aa11.66□□□□□ -0.54
GABRE-207ENST00000476016 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
GABRE-207ENST00000476016 MYOM2P54296 1465 aa11.65□□□□□ -0.54
GABRE-207ENST00000476016 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
GABRE-207ENST00000476016 ZFYVE9O95405 1425 aa11.65□□□□□ -0.54
GABRE-207ENST00000476016 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.55
GABRE-207ENST00000476016 ADAMTSL3P82987 1691 aa11.65□□□□□ -0.55
GABRE-207ENST00000476016 LAMC1P11047 1609 aa11.64□□□□□ -0.55
GABRE-207ENST00000476016 IDI1Q13907 227 aa11.64□□□□□ -0.55
GABRE-207ENST00000476016 DCAF11Q8TEB1 546 aa11.64□□□□□ -0.55
GABRE-207ENST00000476016 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
GABRE-207ENST00000476016 MYO5BQ9ULV0 1848 aa11.63□□□□□ -0.55
GABRE-207ENST00000476016 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
GABRE-207ENST00000476016 C3P01024 1663 aa11.62□□□□□ -0.55
GABRE-207ENST00000476016 FER1L4A9Z1Z3 1794 aa11.62□□□□□ -0.55
GABRE-207ENST00000476016 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms