RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
CALD1-217ENST00000475772 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
CALD1-217ENST00000475772 ESF1Q9H501 851 aaKnown RBP16.96■□□□□ 0.31
CALD1-217ENST00000475772 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.3
CALD1-217ENST00000475772 PTPRTO14522 1441 aa16.96■□□□□ 0.3
CALD1-217ENST00000475772 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
CALD1-217ENST00000475772 ZMYM3Q14202 1370 aa16.95■□□□□ 0.3
CALD1-217ENST00000475772 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
CALD1-217ENST00000475772 KIAA1107Q9UPP5 1409 aa16.95■□□□□ 0.3
CALD1-217ENST00000475772 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
CALD1-217ENST00000475772 MROH2AA6NES4 1674 aa16.92■□□□□ 0.3
CALD1-217ENST00000475772 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
CALD1-217ENST00000475772 LTBP4Q8N2S1 1624 aa16.92■□□□□ 0.3
CALD1-217ENST00000475772 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
CALD1-217ENST00000475772 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
CALD1-217ENST00000475772 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
CALD1-217ENST00000475772 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
CALD1-217ENST00000475772 PLXNC1O60486 1568 aa16.89■□□□□ 0.3
CALD1-217ENST00000475772 NPATQ14207 1427 aa16.89■□□□□ 0.29
CALD1-217ENST00000475772 A2MP01023 1474 aa16.89■□□□□ 0.29
CALD1-217ENST00000475772 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
CALD1-217ENST00000475772 PLEKHH2Q8IVE3 1493 aa16.88■□□□□ 0.29
CALD1-217ENST00000475772 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
CALD1-217ENST00000475772 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
CALD1-217ENST00000475772 MBD5Q9P267 1494 aa16.87■□□□□ 0.29
CALD1-217ENST00000475772 GGT6Q6P531 493 aa16.87■□□□□ 0.29
CALD1-217ENST00000475772 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
CALD1-217ENST00000475772 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
CALD1-217ENST00000475772 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
CALD1-217ENST00000475772 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
CALD1-217ENST00000475772 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
CALD1-217ENST00000475772 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
CALD1-217ENST00000475772 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
CALD1-217ENST00000475772 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
CALD1-217ENST00000475772 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
CALD1-217ENST00000475772 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
CALD1-217ENST00000475772 ZNF335Q9H4Z2 1342 aaPredicted RBP16.8■□□□□ 0.28
CALD1-217ENST00000475772 ZNF142P52746 1687 aaPredicted RBP16.8■□□□□ 0.28
CALD1-217ENST00000475772 MYO3AQ8NEV4 1616 aa16.8■□□□□ 0.28
CALD1-217ENST00000475772 EHBP1L1Q8N3D4 1523 aa16.8■□□□□ 0.28
CALD1-217ENST00000475772 IQSEC2Q5JU85 1478 aa16.79■□□□□ 0.28
CALD1-217ENST00000475772 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
CALD1-217ENST00000475772 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
CALD1-217ENST00000475772 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
CALD1-217ENST00000475772 PKD2Q13563 968 aa16.77■□□□□ 0.28
CALD1-217ENST00000475772 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.28
CALD1-217ENST00000475772 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.27
CALD1-217ENST00000475772 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
CALD1-217ENST00000475772 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
CALD1-217ENST00000475772 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
CALD1-217ENST00000475772 KIF3BO15066 747 aa16.74■□□□□ 0.27
CALD1-217ENST00000475772 STAG3Q9UJ98 1225 aa16.73■□□□□ 0.27
CALD1-217ENST00000475772 A2ML1A8K2U0 1454 aa16.73■□□□□ 0.27
CALD1-217ENST00000475772 RSPH4AQ5TD94 716 aa16.72■□□□□ 0.27
CALD1-217ENST00000475772 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
CALD1-217ENST00000475772 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
CALD1-217ENST00000475772 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
CALD1-217ENST00000475772 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
CALD1-217ENST00000475772 UBAP1LF5GYI3 381 aa16.68■□□□□ 0.26
CALD1-217ENST00000475772 PZPP20742 1482 aa16.67■□□□□ 0.26
CALD1-217ENST00000475772 TNRQ92752 1358 aa16.67■□□□□ 0.26
CALD1-217ENST00000475772 WASHC2CQ9Y4E1 1318 aa16.67■□□□□ 0.26
CALD1-217ENST00000475772 SOCS7O14512 581 aa16.66■□□□□ 0.26
CALD1-217ENST00000475772 ARHGEF5Q12774 1597 aa16.66■□□□□ 0.26
CALD1-217ENST00000475772 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
CALD1-217ENST00000475772 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
CALD1-217ENST00000475772 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
CALD1-217ENST00000475772 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
CALD1-217ENST00000475772 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
CALD1-217ENST00000475772 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
CALD1-217ENST00000475772 MIA2Q96PC5 1412 aa16.64■□□□□ 0.25
CALD1-217ENST00000475772 POLR1AO95602 1720 aaPredicted RBP16.64■□□□□ 0.25
CALD1-217ENST00000475772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.64■□□□□ 0.25
CALD1-217ENST00000475772 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
CALD1-217ENST00000475772 FAM135AQ9P2D6 1515 aa16.63■□□□□ 0.25
CALD1-217ENST00000475772 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
CALD1-217ENST00000475772 VPS8Q8N3P4 1428 aa16.61■□□□□ 0.25
CALD1-217ENST00000475772 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
CALD1-217ENST00000475772 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
CALD1-217ENST00000475772 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
CALD1-217ENST00000475772 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
CALD1-217ENST00000475772 SHANK2Q9UPX8 1470 aa16.6■□□□□ 0.25
CALD1-217ENST00000475772 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
CALD1-217ENST00000475772 MED14O60244 1454 aa16.58■□□□□ 0.24
CALD1-217ENST00000475772 NLRP1Q9C000 1473 aa16.58■□□□□ 0.24
CALD1-217ENST00000475772 VWDEQ8N2E2 1590 aa16.58■□□□□ 0.24
CALD1-217ENST00000475772 UGGT1Q9NYU2 1555 aa16.58■□□□□ 0.24
CALD1-217ENST00000475772 RNF17Q9BXT8 1623 aaKnown RBP16.58■□□□□ 0.24
CALD1-217ENST00000475772 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
CALD1-217ENST00000475772 ABCC3O15438 1527 aa16.56■□□□□ 0.24
CALD1-217ENST00000475772 CPS1P31327 1500 aa16.56■□□□□ 0.24
CALD1-217ENST00000475772 HSPA1LP34931 641 aa16.56■□□□□ 0.24
CALD1-217ENST00000475772 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
CALD1-217ENST00000475772 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
CALD1-217ENST00000475772 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
CALD1-217ENST00000475772 DEPDC5O75140 1603 aa16.55■□□□□ 0.24
CALD1-217ENST00000475772 NPHP4O75161 1426 aaPredicted RBP16.54■□□□□ 0.24
CALD1-217ENST00000475772 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
CALD1-217ENST00000475772 TOM1O60784 492 aa16.53■□□□□ 0.24
CALD1-217ENST00000475772 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms