RNA–Protein interactions for RNA: ENST00000475593.5

TFRC-211, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-211ENST00000475593 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
TFRC-211ENST00000475593 AGLP35573 1532 aa10.05□□□□□ -0.8
TFRC-211ENST00000475593 KIDINS220Q9ULH0 1771 aa10.05□□□□□ -0.8
TFRC-211ENST00000475593 CNTLNQ9NXG0 1405 aa10.05□□□□□ -0.8
TFRC-211ENST00000475593 NPATQ14207 1427 aa10.04□□□□□ -0.8
TFRC-211ENST00000475593 REREQ9P2R6 1566 aa10.04□□□□□ -0.8
TFRC-211ENST00000475593 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
TFRC-211ENST00000475593 SHANK2Q9UPX8 1470 aa10.04□□□□□ -0.8
TFRC-211ENST00000475593 ALKQ9UM73 1620 aa10.04□□□□□ -0.8
TFRC-211ENST00000475593 PLA2R1Q13018 1463 aa10.03□□□□□ -0.8
TFRC-211ENST00000475593 CPS1P31327 1500 aa10.02□□□□□ -0.8
TFRC-211ENST00000475593 PTPRKQ15262 1439 aa10.02□□□□□ -0.81
TFRC-211ENST00000475593 GGT6Q6P531 493 aa10.02□□□□□ -0.81
TFRC-211ENST00000475593 ZBTB12Q9Y330 459 aaPredicted RBP10.02□□□□□ -0.81
TFRC-211ENST00000475593 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
TFRC-211ENST00000475593 STRCP1A6NGW2 1772 aa10.01□□□□□ -0.81
TFRC-211ENST00000475593 DNMT1P26358 1616 aaKnown RBP10.01□□□□□ -0.81
TFRC-211ENST00000475593 MLH3Q9UHC1 1453 aa10.01□□□□□ -0.81
TFRC-211ENST00000475593 ZNF777Q9ULD5 760 aaPredicted RBP10□□□□□ -0.81
TFRC-211ENST00000475593 NEURL4Q96JN8 1562 aa9.98□□□□□ -0.81
TFRC-211ENST00000475593 LRRIQ1Q96JM4 1722 aa9.98□□□□□ -0.81
TFRC-211ENST00000475593 VWDEQ8N2E2 1590 aa9.97□□□□□ -0.81
TFRC-211ENST00000475593 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
TFRC-211ENST00000475593 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
TFRC-211ENST00000475593 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
TFRC-211ENST00000475593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.96□□□□□ -0.82
TFRC-211ENST00000475593 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.82
TFRC-211ENST00000475593 HNRNPMP52272 730 aaKnown RBP eCLIP9.95□□□□□ -0.82
TFRC-211ENST00000475593 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
TFRC-211ENST00000475593 ABCC1P33527 1531 aa9.95□□□□□ -0.82
TFRC-211ENST00000475593 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
TFRC-211ENST00000475593 CDC42BPAQ5VT25 1732 aa9.94□□□□□ -0.82
TFRC-211ENST00000475593 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
TFRC-211ENST00000475593 SAMD9LQ8IVG5 1584 aa9.93□□□□□ -0.82
TFRC-211ENST00000475593 SPAG9O60271 1321 aaKnown RBP9.93□□□□□ -0.82
TFRC-211ENST00000475593 HAX1O00165 279 aa9.93□□□□□ -0.82
TFRC-211ENST00000475593 UPF1Q92900 1129 aaKnown RBP eCLIP9.93□□□□□ -0.82
TFRC-211ENST00000475593 XIRP1Q702N8 1843 aaKnown RBP9.93□□□□□ -0.82
TFRC-211ENST00000475593 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
TFRC-211ENST00000475593 CLIP1P30622 1438 aa9.92□□□□□ -0.82
TFRC-211ENST00000475593 TROQ12816 1431 aaPredicted RBP9.92□□□□□ -0.82
TFRC-211ENST00000475593 FXR2P51116 673 aaKnown RBP eCLIP9.92□□□□□ -0.82
TFRC-211ENST00000475593 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
TFRC-211ENST00000475593 IQGAP1P46940 1657 aa9.92□□□□□ -0.82
TFRC-211ENST00000475593 RNF17Q9BXT8 1623 aaKnown RBP9.92□□□□□ -0.82
TFRC-211ENST00000475593 NPHP4O75161 1426 aaPredicted RBP9.91□□□□□ -0.82
TFRC-211ENST00000475593 THEMISQ8N1K5 641 aaPredicted RBP9.9□□□□□ -0.82
TFRC-211ENST00000475593 TNRQ92752 1358 aa9.89□□□□□ -0.83
TFRC-211ENST00000475593 SYCP2Q9BX26 1530 aa9.89□□□□□ -0.83
TFRC-211ENST00000475593 A2MP01023 1474 aa9.89□□□□□ -0.83
TFRC-211ENST00000475593 ATP7AQ04656 1500 aa9.88□□□□□ -0.83
TFRC-211ENST00000475593 EVX2Q03828 476 aa9.88□□□□□ -0.83
TFRC-211ENST00000475593 DEPDC5O75140 1603 aa9.86□□□□□ -0.83
TFRC-211ENST00000475593 SYNMO15061 1565 aa9.86□□□□□ -0.83
TFRC-211ENST00000475593 RBM33Q96EV2 1170 aaKnown RBP9.86□□□□□ -0.83
TFRC-211ENST00000475593 UGGT1Q9NYU2 1555 aa9.86□□□□□ -0.83
TFRC-211ENST00000475593 ADGBQ8N7X0 1667 aa9.86□□□□□ -0.83
TFRC-211ENST00000475593 ROBO1Q9Y6N7 1651 aa9.86□□□□□ -0.83
TFRC-211ENST00000475593 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
TFRC-211ENST00000475593 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
TFRC-211ENST00000475593 MED14O60244 1454 aa9.85□□□□□ -0.83
TFRC-211ENST00000475593 FMN1Q68DA7 1419 aa9.84□□□□□ -0.83
TFRC-211ENST00000475593 FAM135AQ9P2D6 1515 aa9.84□□□□□ -0.83
TFRC-211ENST00000475593 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
TFRC-211ENST00000475593 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
TFRC-211ENST00000475593 KIF3BO15066 747 aa9.83□□□□□ -0.84
TFRC-211ENST00000475593 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
TFRC-211ENST00000475593 ZC3H13Q5T200 1668 aaKnown RBP9.83□□□□□ -0.84
TFRC-211ENST00000475593 WASHC2CQ9Y4E1 1318 aa9.82□□□□□ -0.84
TFRC-211ENST00000475593 ARHGAP35Q9NRY4 1499 aa9.81□□□□□ -0.84
TFRC-211ENST00000475593 FAM135BQ49AJ0 1406 aa9.81□□□□□ -0.84
TFRC-211ENST00000475593 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
TFRC-211ENST00000475593 CFDP1Q9UEE9 299 aaPredicted RBP9.8□□□□□ -0.84
TFRC-211ENST00000475593 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
TFRC-211ENST00000475593 PZPP20742 1482 aa9.79□□□□□ -0.84
TFRC-211ENST00000475593 GPATCH8Q9UKJ3 1502 aaKnown RBP9.78□□□□□ -0.84
TFRC-211ENST00000475593 RXRBP28702 533 aa9.78□□□□□ -0.84
TFRC-211ENST00000475593 PROSER2Q86WR7 435 aaPredicted RBP9.78□□□□□ -0.84
TFRC-211ENST00000475593 NLRP1Q9C000 1473 aa9.78□□□□□ -0.84
TFRC-211ENST00000475593 LTKP29376 864 aa9.77□□□□□ -0.85
TFRC-211ENST00000475593 ZNF772Q68DY9 489 aaPredicted RBP9.77□□□□□ -0.85
TFRC-211ENST00000475593 TXNDC2Q86VQ3 553 aa9.77□□□□□ -0.85
TFRC-211ENST00000475593 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.85
TFRC-211ENST00000475593 TMEM94Q12767 1356 aa9.76□□□□□ -0.85
TFRC-211ENST00000475593 UBR1Q8IWV7 1749 aa9.76□□□□□ -0.85
TFRC-211ENST00000475593 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
TFRC-211ENST00000475593 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
TFRC-211ENST00000475593 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
TFRC-211ENST00000475593 DHX29Q7Z478 1369 aaKnown RBP9.75□□□□□ -0.85
TFRC-211ENST00000475593 JCADQ9P266 1359 aa9.75□□□□□ -0.85
TFRC-211ENST00000475593 LRP6O75581 1613 aa9.75□□□□□ -0.85
TFRC-211ENST00000475593 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
TFRC-211ENST00000475593 SPDYE2BA6NHP3 402 aa9.74□□□□□ -0.85
TFRC-211ENST00000475593 SPDYE6P0CI01 402 aa9.74□□□□□ -0.85
TFRC-211ENST00000475593 SPDYE2Q495Y8 402 aa9.74□□□□□ -0.85
TFRC-211ENST00000475593 CCNB3Q8WWL7 1395 aa9.74□□□□□ -0.85
TFRC-211ENST00000475593 KIAA1107Q9UPP5 1409 aa9.73□□□□□ -0.85
TFRC-211ENST00000475593 SRCAPQ6ZRS2 3230 aa9.73□□□□□ -0.85
TFRC-211ENST00000475593 SLAIN2Q9P270 581 aa9.73□□□□□ -0.85
TFRC-211ENST00000475593 CCDC18Q5T9S5 1454 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms