RNA–Protein interactions for RNA: ENST00000475325.1

FRMD4A-205, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 875 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-205ENST00000475325 A2MP01023 1474 aa13.93□□□□□ -0.18
FRMD4A-205ENST00000475325 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
FRMD4A-205ENST00000475325 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
FRMD4A-205ENST00000475325 FAM135AQ9P2D6 1515 aa13.93□□□□□ -0.18
FRMD4A-205ENST00000475325 RNF17Q9BXT8 1623 aaKnown RBP13.91□□□□□ -0.18
FRMD4A-205ENST00000475325 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
FRMD4A-205ENST00000475325 COL17A1Q9UMD9 1497 aaPredicted RBP13.89□□□□□ -0.19
FRMD4A-205ENST00000475325 MROH1Q8NDA8 1641 aa13.89□□□□□ -0.19
FRMD4A-205ENST00000475325 YEATS2Q9ULM3 1422 aa13.89□□□□□ -0.19
FRMD4A-205ENST00000475325 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
FRMD4A-205ENST00000475325 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
FRMD4A-205ENST00000475325 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
FRMD4A-205ENST00000475325 PKD2Q13563 968 aa13.87□□□□□ -0.19
FRMD4A-205ENST00000475325 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
FRMD4A-205ENST00000475325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.19
FRMD4A-205ENST00000475325 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
FRMD4A-205ENST00000475325 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
FRMD4A-205ENST00000475325 TET3O43151 1660 aa13.86□□□□□ -0.19
FRMD4A-205ENST00000475325 KIF3BO15066 747 aa13.86□□□□□ -0.19
FRMD4A-205ENST00000475325 FOXD1Q16676 465 aa13.86□□□□□ -0.19
FRMD4A-205ENST00000475325 KANK1Q14678 1352 aa13.85□□□□□ -0.19
FRMD4A-205ENST00000475325 NEUROD1Q13562 356 aa13.85□□□□□ -0.19
FRMD4A-205ENST00000475325 ATP10AO60312 1499 aa13.85□□□□□ -0.19
FRMD4A-205ENST00000475325 CEP152O94986 1710 aa13.84□□□□□ -0.19
FRMD4A-205ENST00000475325 E9PCH4 1651 aa13.83□□□□□ -0.2
FRMD4A-205ENST00000475325 TIMELESSQ9UNS1 1208 aa13.83□□□□□ -0.2
FRMD4A-205ENST00000475325 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
FRMD4A-205ENST00000475325 AGLP35573 1532 aa13.81□□□□□ -0.2
FRMD4A-205ENST00000475325 LMTK2Q8IWU2 1503 aa13.81□□□□□ -0.2
FRMD4A-205ENST00000475325 TONSLQ96HA7 1378 aa13.81□□□□□ -0.2
FRMD4A-205ENST00000475325 ZC3H13Q5T200 1668 aaKnown RBP13.8□□□□□ -0.2
FRMD4A-205ENST00000475325 EFCAB6Q5THR3 1501 aa13.8□□□□□ -0.2
FRMD4A-205ENST00000475325 SPHKAPQ2M3C7 1700 aa13.79□□□□□ -0.2
FRMD4A-205ENST00000475325 SIGLEC1Q9BZZ2 1709 aa13.78□□□□□ -0.2
FRMD4A-205ENST00000475325 ABCC3O15438 1527 aa13.78□□□□□ -0.2
FRMD4A-205ENST00000475325 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.21
FRMD4A-205ENST00000475325 GGT6Q6P531 493 aa13.76□□□□□ -0.21
FRMD4A-205ENST00000475325 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
FRMD4A-205ENST00000475325 TRPM2O94759 1503 aa13.74□□□□□ -0.21
FRMD4A-205ENST00000475325 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
FRMD4A-205ENST00000475325 PTPRTO14522 1441 aa13.73□□□□□ -0.21
FRMD4A-205ENST00000475325 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
FRMD4A-205ENST00000475325 WASHC2CQ9Y4E1 1318 aa13.72□□□□□ -0.21
FRMD4A-205ENST00000475325 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
FRMD4A-205ENST00000475325 CLTCL1P53675 1640 aa13.71□□□□□ -0.22
FRMD4A-205ENST00000475325 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
FRMD4A-205ENST00000475325 NPATQ14207 1427 aa13.7□□□□□ -0.22
FRMD4A-205ENST00000475325 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
FRMD4A-205ENST00000475325 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
FRMD4A-205ENST00000475325 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
FRMD4A-205ENST00000475325 KIF1BO60333 1816 aa13.69□□□□□ -0.22
FRMD4A-205ENST00000475325 PREX1Q8TCU6 1659 aa13.66□□□□□ -0.22
FRMD4A-205ENST00000475325 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
FRMD4A-205ENST00000475325 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
FRMD4A-205ENST00000475325 NOS1P29475 1434 aa13.64□□□□□ -0.23
FRMD4A-205ENST00000475325 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
FRMD4A-205ENST00000475325 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
FRMD4A-205ENST00000475325 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
FRMD4A-205ENST00000475325 ARID4BQ4LE39 1312 aaPredicted RBP13.64□□□□□ -0.23
FRMD4A-205ENST00000475325 SYNMO15061 1565 aa13.63□□□□□ -0.23
FRMD4A-205ENST00000475325 MLECQ14165 292 aa13.63□□□□□ -0.23
FRMD4A-205ENST00000475325 MROH2AA6NES4 1674 aa13.63□□□□□ -0.23
FRMD4A-205ENST00000475325 UHRF1BP1Q6BDS2 1440 aa13.61□□□□□ -0.23
FRMD4A-205ENST00000475325 ERVK-7P63135 1459 aa13.61□□□□□ -0.23
FRMD4A-205ENST00000475325 FER1L4A9Z1Z3 1794 aa13.6□□□□□ -0.23
FRMD4A-205ENST00000475325 ESF1Q9H501 851 aaKnown RBP13.6□□□□□ -0.23
FRMD4A-205ENST00000475325 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
FRMD4A-205ENST00000475325 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
FRMD4A-205ENST00000475325 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
FRMD4A-205ENST00000475325 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
FRMD4A-205ENST00000475325 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.23
FRMD4A-205ENST00000475325 NBPF8Q3BBV2 869 aa13.58□□□□□ -0.24
FRMD4A-205ENST00000475325 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
FRMD4A-205ENST00000475325 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
FRMD4A-205ENST00000475325 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
FRMD4A-205ENST00000475325 MYO5BQ9ULV0 1848 aa13.56□□□□□ -0.24
FRMD4A-205ENST00000475325 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
FRMD4A-205ENST00000475325 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
FRMD4A-205ENST00000475325 PRAG1Q86YV5 1406 aa13.56□□□□□ -0.24
FRMD4A-205ENST00000475325 PPLO60437 1756 aa13.55□□□□□ -0.24
FRMD4A-205ENST00000475325 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
FRMD4A-205ENST00000475325 ZNF326Q5BKZ1 582 aaKnown RBP13.55□□□□□ -0.24
FRMD4A-205ENST00000475325 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
FRMD4A-205ENST00000475325 C3P01024 1663 aa13.54□□□□□ -0.24
FRMD4A-205ENST00000475325 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
FRMD4A-205ENST00000475325 MYOM2P54296 1465 aa13.54□□□□□ -0.24
FRMD4A-205ENST00000475325 TMEM131LA2VDJ0 1609 aa13.53□□□□□ -0.24
FRMD4A-205ENST00000475325 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
FRMD4A-205ENST00000475325 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.25
FRMD4A-205ENST00000475325 KIAA1210Q9ULL0 1709 aa13.51□□□□□ -0.25
FRMD4A-205ENST00000475325 ADAMTSL3P82987 1691 aa13.51□□□□□ -0.25
FRMD4A-205ENST00000475325 LAMC1P11047 1609 aa13.51□□□□□ -0.25
FRMD4A-205ENST00000475325 IDI1Q13907 227 aa13.51□□□□□ -0.25
FRMD4A-205ENST00000475325 RIMS1Q86UR5 1692 aaKnown RBP13.5□□□□□ -0.25
FRMD4A-205ENST00000475325 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
FRMD4A-205ENST00000475325 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
FRMD4A-205ENST00000475325 KDM5AP29375 1690 aaKnown RBP13.49□□□□□ -0.25
FRMD4A-205ENST00000475325 TNRQ92752 1358 aa13.48□□□□□ -0.25
FRMD4A-205ENST00000475325 EIF4G2P78344 907 aaKnown RBP eCLIP13.48□□□□□ -0.25
FRMD4A-205ENST00000475325 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms