RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 PDE4AP27815 886 aa18.04■□□□□ 0.48
ARHGEF39-203ENST00000475323 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
ARHGEF39-203ENST00000475323 FBLN2P98095 1184 aa18.03■□□□□ 0.48
ARHGEF39-203ENST00000475323 ANO8Q9HCE9 1232 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 HNRNPMP52272 730 aaKnown RBP eCLIP18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 CHMP7Q8WUX9 453 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF39-203ENST00000475323 C9orf84Q5VXU9 1444 aa18■□□□□ 0.47
ARHGEF39-203ENST00000475323 TCERG1O14776 1098 aaKnown RBP18■□□□□ 0.47
ARHGEF39-203ENST00000475323 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
ARHGEF39-203ENST00000475323 NLRP13Q86W25 1043 aa18■□□□□ 0.47
ARHGEF39-203ENST00000475323 BACH2Q9BYV9 841 aa17.98■□□□□ 0.47
ARHGEF39-203ENST00000475323 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
ARHGEF39-203ENST00000475323 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
ARHGEF39-203ENST00000475323 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
ARHGEF39-203ENST00000475323 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
ARHGEF39-203ENST00000475323 E9PCH4 1651 aa17.97■□□□□ 0.47
ARHGEF39-203ENST00000475323 PER1O15534 1290 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF39-203ENST00000475323 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
ARHGEF39-203ENST00000475323 CDC42BPAQ5VT25 1732 aa17.96■□□□□ 0.47
ARHGEF39-203ENST00000475323 PLEKHD1A6NEE1 506 aa17.95■□□□□ 0.46
ARHGEF39-203ENST00000475323 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
ARHGEF39-203ENST00000475323 ADCY10Q96PN6 1610 aa17.94■□□□□ 0.46
ARHGEF39-203ENST00000475323 NEFMP07197 916 aa17.94■□□□□ 0.46
ARHGEF39-203ENST00000475323 CRBNQ96SW2 442 aa17.94■□□□□ 0.46
ARHGEF39-203ENST00000475323 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
ARHGEF39-203ENST00000475323 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
ARHGEF39-203ENST00000475323 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF39-203ENST00000475323 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
ARHGEF39-203ENST00000475323 C20orf194Q5TEA3 1177 aa17.92■□□□□ 0.46
ARHGEF39-203ENST00000475323 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
ARHGEF39-203ENST00000475323 SYNJ2O15056 1496 aa17.91■□□□□ 0.46
ARHGEF39-203ENST00000475323 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
ARHGEF39-203ENST00000475323 PANK3Q9H999 370 aa17.9■□□□□ 0.46
ARHGEF39-203ENST00000475323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.466e-6■□□□□ 11
ARHGEF39-203ENST00000475323 RTN4Q9NQC3 1192 aaKnown RBP17.89■□□□□ 0.46
ARHGEF39-203ENST00000475323 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.46
ARHGEF39-203ENST00000475323 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
ARHGEF39-203ENST00000475323 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
ARHGEF39-203ENST00000475323 MS4A1P11836 297 aa17.89■□□□□ 0.45
ARHGEF39-203ENST00000475323 PTPRGP23470 1445 aa17.88■□□□□ 0.45
ARHGEF39-203ENST00000475323 SHANK2Q9UPX8 1470 aa17.87■□□□□ 0.45
ARHGEF39-203ENST00000475323 ATP10BO94823 1461 aa17.87■□□□□ 0.45
ARHGEF39-203ENST00000475323 TESK2Q96S53 571 aa17.87■□□□□ 0.45
ARHGEF39-203ENST00000475323 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
ARHGEF39-203ENST00000475323 TRPM1Q7Z4N2 1603 aa17.86■□□□□ 0.45
ARHGEF39-203ENST00000475323 CCDC144AA2RUR9 1427 aa17.85■□□□□ 0.45
ARHGEF39-203ENST00000475323 FAM135AQ9P2D6 1515 aa17.85■□□□□ 0.45
ARHGEF39-203ENST00000475323 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
ARHGEF39-203ENST00000475323 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
ARHGEF39-203ENST00000475323 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
ARHGEF39-203ENST00000475323 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF39-203ENST00000475323 A2MP01023 1474 aa17.81■□□□□ 0.44
ARHGEF39-203ENST00000475323 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF39-203ENST00000475323 ABCA8O94911 1581 aa17.81■□□□□ 0.44
ARHGEF39-203ENST00000475323 NUP160Q12769 1436 aa17.79■□□□□ 0.44
ARHGEF39-203ENST00000475323 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
ARHGEF39-203ENST00000475323 GPRASP1Q5JY77 1395 aa17.78■□□□□ 0.44
ARHGEF39-203ENST00000475323 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF39-203ENST00000475323 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
ARHGEF39-203ENST00000475323 PLEKHH1Q9ULM0 1364 aa17.77■□□□□ 0.44
ARHGEF39-203ENST00000475323 TMF1P82094 1093 aa17.76■□□□□ 0.43
ARHGEF39-203ENST00000475323 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
ARHGEF39-203ENST00000475323 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
ARHGEF39-203ENST00000475323 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
ARHGEF39-203ENST00000475323 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
ARHGEF39-203ENST00000475323 ZMYM4Q5VZL5 1548 aa17.75■□□□□ 0.43
ARHGEF39-203ENST00000475323 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
ARHGEF39-203ENST00000475323 ARHGEF5Q12774 1597 aa17.74■□□□□ 0.43
ARHGEF39-203ENST00000475323 PRDM15P57071 1507 aaPredicted RBP17.74■□□□□ 0.43
ARHGEF39-203ENST00000475323 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
ARHGEF39-203ENST00000475323 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
ARHGEF39-203ENST00000475323 UBE2Q2Q8WVN8 375 aa17.73■□□□□ 0.43
ARHGEF39-203ENST00000475323 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
ARHGEF39-203ENST00000475323 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
ARHGEF39-203ENST00000475323 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
ARHGEF39-203ENST00000475323 RGS3P49796 1198 aa17.71■□□□□ 0.43
ARHGEF39-203ENST00000475323 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
ARHGEF39-203ENST00000475323 MYO5CQ9NQX4 1742 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 WDR43Q15061 677 aaKnown RBP eCLIP17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 CCDC146Q8IYE0 955 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 BRPF3Q9ULD4 1205 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 PLEKHH2Q8IVE3 1493 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 C8orf34Q49A92 452 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 SYCP2Q9BX26 1530 aa17.7■□□□□ 0.42
ARHGEF39-203ENST00000475323 KNSTRNQ9Y448 316 aa17.69■□□□□ 0.42
ARHGEF39-203ENST00000475323 CENPQQ7L2Z9 268 aaPredicted RBP17.69■□□□□ 0.42
ARHGEF39-203ENST00000475323 INSRP06213 1382 aa17.68■□□□□ 0.42
ARHGEF39-203ENST00000475323 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
ARHGEF39-203ENST00000475323 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
ARHGEF39-203ENST00000475323 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
ARHGEF39-203ENST00000475323 WDR7Q9Y4E6 1490 aa17.66■□□□□ 0.42
ARHGEF39-203ENST00000475323 GSE1Q14687 1217 aa17.66■□□□□ 0.42
ARHGEF39-203ENST00000475323 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
ARHGEF39-203ENST00000475323 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF39-203ENST00000475323 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
ARHGEF39-203ENST00000475323 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF39-203ENST00000475323 LAMC1P11047 1609 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms