RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 FAM135AQ9P2D6 1515 aa17.77■□□□□ 0.43
GPM6B-208ENST00000475307 SHANK2Q9UPX8 1470 aa17.76■□□□□ 0.43
GPM6B-208ENST00000475307 RRP7BPQ9NSQ0 103 aa17.76■□□□□ 0.43
GPM6B-208ENST00000475307 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
GPM6B-208ENST00000475307 DUOX2Q9NRD8 1548 aa17.75■□□□□ 0.43
GPM6B-208ENST00000475307 KIF15Q9NS87 1388 aa17.75■□□□□ 0.43
GPM6B-208ENST00000475307 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
GPM6B-208ENST00000475307 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
GPM6B-208ENST00000475307 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
GPM6B-208ENST00000475307 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
GPM6B-208ENST00000475307 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
GPM6B-208ENST00000475307 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
GPM6B-208ENST00000475307 CROCC2H7BZ55 1655 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 PZPP20742 1482 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 TNRQ92752 1358 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
GPM6B-208ENST00000475307 CEP170BQ9Y4F5 1589 aaPredicted RBP17.71■□□□□ 0.43
GPM6B-208ENST00000475307 RNF17Q9BXT8 1623 aaKnown RBP17.71■□□□□ 0.43
GPM6B-208ENST00000475307 PTPRTO14522 1441 aa17.71■□□□□ 0.43
GPM6B-208ENST00000475307 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
GPM6B-208ENST00000475307 ABCC3O15438 1527 aa17.69■□□□□ 0.42
GPM6B-208ENST00000475307 CERKQ8TCT0 537 aa17.69■□□□□ 0.42
GPM6B-208ENST00000475307 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
GPM6B-208ENST00000475307 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
GPM6B-208ENST00000475307 ZNF142P52746 1687 aaPredicted RBP17.68■□□□□ 0.42
GPM6B-208ENST00000475307 A2ML1A8K2U0 1454 aa17.68■□□□□ 0.42
GPM6B-208ENST00000475307 PPARGC1BQ86YN6 1023 aaKnown RBP17.67■□□□□ 0.42
GPM6B-208ENST00000475307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
GPM6B-208ENST00000475307 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
GPM6B-208ENST00000475307 PKD2Q13563 968 aa17.66■□□□□ 0.42
GPM6B-208ENST00000475307 ZC3H13Q5T200 1668 aaKnown RBP17.66■□□□□ 0.42
GPM6B-208ENST00000475307 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
GPM6B-208ENST00000475307 KANK1Q14678 1352 aa17.64■□□□□ 0.41
GPM6B-208ENST00000475307 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
GPM6B-208ENST00000475307 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
GPM6B-208ENST00000475307 PRDM15P57071 1507 aaPredicted RBP17.62■□□□□ 0.41
GPM6B-208ENST00000475307 THEMISQ8N1K5 641 aaPredicted RBP17.61■□□□□ 0.41
GPM6B-208ENST00000475307 CEP152O94986 1710 aa17.61■□□□□ 0.41
GPM6B-208ENST00000475307 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
GPM6B-208ENST00000475307 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
GPM6B-208ENST00000475307 UGGT1Q9NYU2 1555 aa17.57■□□□□ 0.4
GPM6B-208ENST00000475307 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
GPM6B-208ENST00000475307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.57■□□□□ 0.4
GPM6B-208ENST00000475307 ITGAEP38570 1179 aa17.57■□□□□ 0.4
GPM6B-208ENST00000475307 ANKLE2Q86XL3 938 aa17.57■□□□□ 0.4
GPM6B-208ENST00000475307 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
GPM6B-208ENST00000475307 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
GPM6B-208ENST00000475307 ZNF335Q9H4Z2 1342 aaPredicted RBP17.54■□□□□ 0.4
GPM6B-208ENST00000475307 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
GPM6B-208ENST00000475307 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.4
GPM6B-208ENST00000475307 VWDEQ8N2E2 1590 aa17.51■□□□□ 0.39
GPM6B-208ENST00000475307 ROCK1Q13464 1354 aa17.51■□□□□ 0.39
GPM6B-208ENST00000475307 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
GPM6B-208ENST00000475307 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
GPM6B-208ENST00000475307 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
GPM6B-208ENST00000475307 NPHP4O75161 1426 aaPredicted RBP17.48■□□□□ 0.39
GPM6B-208ENST00000475307 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
GPM6B-208ENST00000475307 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
GPM6B-208ENST00000475307 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.39
GPM6B-208ENST00000475307 MED14O60244 1454 aa17.45■□□□□ 0.38
GPM6B-208ENST00000475307 UBR1Q8IWV7 1749 aa17.45■□□□□ 0.38
GPM6B-208ENST00000475307 IDI1Q13907 227 aa17.45■□□□□ 0.38
GPM6B-208ENST00000475307 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
GPM6B-208ENST00000475307 EID1Q9Y6B2 187 aa17.43■□□□□ 0.38
GPM6B-208ENST00000475307 NOS1P29475 1434 aa17.43■□□□□ 0.38
GPM6B-208ENST00000475307 RRBP1Q9P2E9 1410 aaKnown RBP17.43■□□□□ 0.38
GPM6B-208ENST00000475307 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
GPM6B-208ENST00000475307 UNC13BO14795 1591 aa17.42■□□□□ 0.38
GPM6B-208ENST00000475307 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
GPM6B-208ENST00000475307 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
GPM6B-208ENST00000475307 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
GPM6B-208ENST00000475307 LTKP29376 864 aa17.41■□□□□ 0.38
GPM6B-208ENST00000475307 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
GPM6B-208ENST00000475307 SLIT1O75093 1534 aa17.41■□□□□ 0.38
GPM6B-208ENST00000475307 NUP155O75694 1391 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 SYNMO15061 1565 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 TET3O43151 1660 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 IQGAP1P46940 1657 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 UBAP1LF5GYI3 381 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
GPM6B-208ENST00000475307 CPS1P31327 1500 aa17.39■□□□□ 0.37
GPM6B-208ENST00000475307 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
GPM6B-208ENST00000475307 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
GPM6B-208ENST00000475307 KDM5AP29375 1690 aaKnown RBP17.35■□□□□ 0.37
GPM6B-208ENST00000475307 GCC2Q8IWJ2 1684 aa17.35■□□□□ 0.37
GPM6B-208ENST00000475307 CHGAP10645 457 aaKnown RBP17.34■□□□□ 0.37
GPM6B-208ENST00000475307 BCANQ96GW7 911 aa17.32■□□□□ 0.36
GPM6B-208ENST00000475307 E9PCH4 1651 aa17.32■□□□□ 0.36
GPM6B-208ENST00000475307 TOM1O60784 492 aa17.31■□□□□ 0.36
GPM6B-208ENST00000475307 NAIPQ13075 1403 aa17.3■□□□□ 0.36
GPM6B-208ENST00000475307 HDGFP51858 240 aaKnown RBP17.3■□□□□ 0.36
GPM6B-208ENST00000475307 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
GPM6B-208ENST00000475307 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
GPM6B-208ENST00000475307 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
GPM6B-208ENST00000475307 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
GPM6B-208ENST00000475307 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.36
GPM6B-208ENST00000475307 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
GPM6B-208ENST00000475307 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms