RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 KDM5DQ9BY66 1539 aa39.68■■■■□ 3.94
TMEM54-205ENST00000475208 FAM135AQ9P2D6 1515 aa39.67■■■■□ 3.94
TMEM54-205ENST00000475208 DNMT1P26358 1616 aaKnown RBP39.65■■■■□ 3.94
TMEM54-205ENST00000475208 LRRC9Q6ZRR7 1453 aa39.64■■■■□ 3.94
TMEM54-205ENST00000475208 PZPP20742 1482 aa39.62■■■■□ 3.93
TMEM54-205ENST00000475208 TNRQ92752 1358 aa39.62■■■■□ 3.93
TMEM54-205ENST00000475208 FBXO31Q5XUX0 539 aaPredicted RBP39.6■■■■□ 3.93
TMEM54-205ENST00000475208 DISP3Q9P2K9 1392 aa39.59■■■■□ 3.93
TMEM54-205ENST00000475208 TSPY4P0CV99 314 aa39.59■■■■□ 3.93
TMEM54-205ENST00000475208 TSPY10P0CW01 314 aa39.59■■■■□ 3.93
TMEM54-205ENST00000475208 WASHC2CQ9Y4E1 1318 aa39.59■■■■□ 3.93
TMEM54-205ENST00000475208 LOC105371045A0A1W2PR82 267 aa39.58■■■■□ 3.93
TMEM54-205ENST00000475208 MAST1Q9Y2H9 1570 aa39.5■■■■□ 3.91
TMEM54-205ENST00000475208 POLR1AO95602 1720 aaPredicted RBP39.49■■■■□ 3.91
TMEM54-205ENST00000475208 MAP3K1Q13233 1512 aa39.48■■■■□ 3.91
TMEM54-205ENST00000475208 KANK4Q5T7N3 995 aaPredicted RBP39.47■■■■□ 3.91
TMEM54-205ENST00000475208 NEURL4Q96JN8 1562 aa39.46■■■■□ 3.91
TMEM54-205ENST00000475208 UBAP1LF5GYI3 381 aa39.46■■■■□ 3.91
TMEM54-205ENST00000475208 RNF17Q9BXT8 1623 aaKnown RBP39.46■■■■□ 3.91
TMEM54-205ENST00000475208 SPATA31D1Q6ZQQ2 1576 aa39.46■■■■□ 3.91
TMEM54-205ENST00000475208 MIA2Q96PC5 1412 aa39.45■■■■□ 3.91
TMEM54-205ENST00000475208 NLRP1Q9C000 1473 aa39.43■■■■□ 3.9
TMEM54-205ENST00000475208 MYOM3Q5VTT5 1437 aa39.42■■■■□ 3.9
TMEM54-205ENST00000475208 ILDR2Q71H61 639 aa39.4■■■■□ 3.9
TMEM54-205ENST00000475208 ABCC3O15438 1527 aa39.4■■■■□ 3.9
TMEM54-205ENST00000475208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.39■■■■□ 3.9
TMEM54-205ENST00000475208 EIF2AK4Q9P2K8 1649 aaKnown RBP39.39■■■■□ 3.9
TMEM54-205ENST00000475208 ZC3H13Q5T200 1668 aaKnown RBP39.38■■■■□ 3.9
TMEM54-205ENST00000475208 UGGT1Q9NYU2 1555 aa39.38■■■■□ 3.9
TMEM54-205ENST00000475208 ANKLE2Q86XL3 938 aa39.35■■■■□ 3.89
TMEM54-205ENST00000475208 THEMISQ8N1K5 641 aaPredicted RBP39.35■■■■□ 3.89
TMEM54-205ENST00000475208 MROH1Q8NDA8 1641 aa39.32■■■■□ 3.88
TMEM54-205ENST00000475208 CPS1P31327 1500 aa39.31■■■■□ 3.88
TMEM54-205ENST00000475208 SHANK2Q9UPX8 1470 aa39.3■■■■□ 3.88
TMEM54-205ENST00000475208 DEPDC5O75140 1603 aa39.28■■■■□ 3.88
TMEM54-205ENST00000475208 ERVK-7P63135 1459 aa39.27■■■■□ 3.88
TMEM54-205ENST00000475208 DUOX2Q9NRD8 1548 aa39.27■■■■□ 3.88
TMEM54-205ENST00000475208 NPHP4O75161 1426 aaPredicted RBP39.26■■■■□ 3.88
TMEM54-205ENST00000475208 MED14O60244 1454 aa39.25■■■■□ 3.87
TMEM54-205ENST00000475208 CEP152O94986 1710 aa39.24■■■■□ 3.87
TMEM54-205ENST00000475208 VWDEQ8N2E2 1590 aa39.24■■■■□ 3.87
TMEM54-205ENST00000475208 CROCC2H7BZ55 1655 aa39.19■■■■□ 3.86
TMEM54-205ENST00000475208 KIF15Q9NS87 1388 aa39.19■■■■□ 3.86
TMEM54-205ENST00000475208 IQGAP1P46940 1657 aa39.19■■■■□ 3.86
TMEM54-205ENST00000475208 PTPN23Q9H3S7 1636 aa39.18■■■■□ 3.86
TMEM54-205ENST00000475208 ABCC5O15440 1437 aa39.17■■■■□ 3.86
TMEM54-205ENST00000475208 SOCS7O14512 581 aa39.17■■■■□ 3.86
TMEM54-205ENST00000475208 SCAF1Q9H7N4 1312 aaKnown RBP39.14■■■■□ 3.86
TMEM54-205ENST00000475208 APLP2Q06481 763 aa39.14■■■■□ 3.86
TMEM54-205ENST00000475208 PRDM15P57071 1507 aaPredicted RBP39.14■■■■□ 3.86
TMEM54-205ENST00000475208 TOM1O60784 492 aa39.13■■■■□ 3.85
TMEM54-205ENST00000475208 ERBINQ96RT1 1412 aa39.13■■■■□ 3.85
TMEM54-205ENST00000475208 PIP4K2BP78356 416 aa39.12■■■■□ 3.85
TMEM54-205ENST00000475208 CFAP65Q6ZU64 1925 aaKnown RBP39.1■■■■□ 3.85
TMEM54-205ENST00000475208 RRP7BPQ9NSQ0 103 aa39.1■■■■□ 3.85
TMEM54-205ENST00000475208 UBR1Q8IWV7 1749 aa39.09■■■■□ 3.85
TMEM54-205ENST00000475208 DAPK1P53355 1430 aa39.08■■■■□ 3.85
TMEM54-205ENST00000475208 ARHGAP31Q2M1Z3 1444 aa39.06■■■■□ 3.84
TMEM54-205ENST00000475208 HSPA1LP34931 641 aa39.05■■■■□ 3.84
TMEM54-205ENST00000475208 FGD6Q6ZV73 1430 aa39.05■■■■□ 3.84
TMEM54-205ENST00000475208 STRCP1A6NGW2 1772 aa39.01■■■■□ 3.84
TMEM54-205ENST00000475208 SCAF11Q99590 1463 aaKnown RBP39.01■■■■□ 3.84
TMEM54-205ENST00000475208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39■■■■□ 3.83
TMEM54-205ENST00000475208 ALKQ9UM73 1620 aa38.98■■■■□ 3.83
TMEM54-205ENST00000475208 SYNMO15061 1565 aa38.97■■■■□ 3.83
TMEM54-205ENST00000475208 ARHGAP23Q9P227 1491 aa38.97■■■■□ 3.83
TMEM54-205ENST00000475208 SLIT1O75093 1534 aa38.96■■■■□ 3.83
TMEM54-205ENST00000475208 LRRC7Q96NW7 1537 aa38.96■■■■□ 3.83
TMEM54-205ENST00000475208 KANK1Q14678 1352 aa38.95■■■■□ 3.83
TMEM54-205ENST00000475208 ANKRD30AQ9BXX3 1397 aa38.94■■■■□ 3.82
TMEM54-205ENST00000475208 LTKP29376 864 aa38.92■■■■□ 3.82
TMEM54-205ENST00000475208 CHIC2Q9UKJ5 165 aa38.92■■■■□ 3.82
TMEM54-205ENST00000475208 PIK3C2BO00750 1634 aa38.9■■■■□ 3.82
TMEM54-205ENST00000475208 TXNDC2Q86VQ3 553 aa38.9■■■■□ 3.82
TMEM54-205ENST00000475208 MED1Q15648 1581 aaPredicted RBP38.9■■■■□ 3.82
TMEM54-205ENST00000475208 LMTK2Q8IWU2 1503 aa38.87■■■■□ 3.81
TMEM54-205ENST00000475208 EID1Q9Y6B2 187 aa38.84■■■■□ 3.81
TMEM54-205ENST00000475208 TMEM2Q9UHN6 1383 aa38.82■■■■□ 3.8
TMEM54-205ENST00000475208 STAG3Q9UJ98 1225 aa38.81■■■■□ 3.8
TMEM54-205ENST00000475208 ADGRL2O95490 1459 aa38.79■■■■□ 3.8
TMEM54-205ENST00000475208 EFCAB6Q5THR3 1501 aa38.79■■■■□ 3.8
TMEM54-205ENST00000475208 KDM5AP29375 1690 aaKnown RBP38.78■■■■□ 3.8
TMEM54-205ENST00000475208 IDI1Q13907 227 aa38.75■■■■□ 3.79
TMEM54-205ENST00000475208 FAM50AQ14320 339 aaKnown RBP38.72■■■■□ 3.79
TMEM54-205ENST00000475208 SENP3Q9H4L4 574 aaPredicted RBP38.72■■■■□ 3.79
TMEM54-205ENST00000475208 NOS1P29475 1434 aa38.72■■■■□ 3.79
TMEM54-205ENST00000475208 XIRP1Q702N8 1843 aaKnown RBP38.68■■■■□ 3.78
TMEM54-205ENST00000475208 ADGRB3O60242 1522 aa38.68■■■■□ 3.78
TMEM54-205ENST00000475208 ANKRD50Q9ULJ7 1429 aa38.65■■■■□ 3.78
TMEM54-205ENST00000475208 TET3O43151 1660 aa38.6■■■■□ 3.77
TMEM54-205ENST00000475208 PHF23Q9BUL5 403 aaPredicted RBP38.6■■■■□ 3.77
TMEM54-205ENST00000475208 RPRD2Q5VT52 1461 aaKnown RBP38.6■■■■□ 3.77
TMEM54-205ENST00000475208 SLC52A1Q9NWF4 448 aa38.59■■■■□ 3.77
TMEM54-205ENST00000475208 SLC26A8Q96RN1 970 aa38.57■■■■□ 3.76
TMEM54-205ENST00000475208 KCNA6P17658 529 aa38.56■■■■□ 3.76
TMEM54-205ENST00000475208 TMEM94Q12767 1356 aa38.56■■■■□ 3.76
TMEM54-205ENST00000475208 UNC13BO14795 1591 aa38.48■■■■□ 3.75
TMEM54-205ENST00000475208 NWD1Q149M9 1564 aa38.48■■■■□ 3.75
TMEM54-205ENST00000475208 PROSER2Q86WR7 435 aaPredicted RBP38.47■■■■□ 3.75
TMEM54-205ENST00000475208 FAM135BQ49AJ0 1406 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms