RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 DAXXQ9UER7 740 aaPredicted RBP17.27■□□□□ 0.35
CHRNA4-204ENST00000475033 ATP10BO94823 1461 aa17.26■□□□□ 0.35
CHRNA4-204ENST00000475033 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
CHRNA4-204ENST00000475033 CEP170Q5SW79 1584 aa17.25■□□□□ 0.35
CHRNA4-204ENST00000475033 PDE4AP27815 886 aa17.23■□□□□ 0.35
CHRNA4-204ENST00000475033 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
CHRNA4-204ENST00000475033 ARHGAP5Q13017 1502 aa17.22■□□□□ 0.35
CHRNA4-204ENST00000475033 KIF14Q15058 1648 aa17.21■□□□□ 0.35
CHRNA4-204ENST00000475033 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
CHRNA4-204ENST00000475033 NBPF1Q3BBV0 1214 aa17.21■□□□□ 0.35
CHRNA4-204ENST00000475033 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
CHRNA4-204ENST00000475033 DNMT1P26358 1616 aaKnown RBP17.2■□□□□ 0.34
CHRNA4-204ENST00000475033 GSE1Q14687 1217 aa17.2■□□□□ 0.34
CHRNA4-204ENST00000475033 AFAP1Q8N556 730 aa17.2■□□□□ 0.34
CHRNA4-204ENST00000475033 NUP160Q12769 1436 aa17.19■□□□□ 0.34
CHRNA4-204ENST00000475033 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
CHRNA4-204ENST00000475033 GCC2Q8IWJ2 1684 aa17.18■□□□□ 0.34
CHRNA4-204ENST00000475033 KIF3BO15066 747 aa17.18■□□□□ 0.34
CHRNA4-204ENST00000475033 DENND4BO75064 1496 aaPredicted RBP17.18■□□□□ 0.34
CHRNA4-204ENST00000475033 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
CHRNA4-204ENST00000475033 PZPP20742 1482 aa17.17■□□□□ 0.34
CHRNA4-204ENST00000475033 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
CHRNA4-204ENST00000475033 TMF1P82094 1093 aa17.16■□□□□ 0.34
CHRNA4-204ENST00000475033 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
CHRNA4-204ENST00000475033 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
CHRNA4-204ENST00000475033 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
CHRNA4-204ENST00000475033 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
CHRNA4-204ENST00000475033 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
CHRNA4-204ENST00000475033 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
CHRNA4-204ENST00000475033 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
CHRNA4-204ENST00000475033 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
CHRNA4-204ENST00000475033 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
CHRNA4-204ENST00000475033 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
CHRNA4-204ENST00000475033 WDR43Q15061 677 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHRNA4-204ENST00000475033 GGT6Q6P531 493 aa17.11■□□□□ 0.33
CHRNA4-204ENST00000475033 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
CHRNA4-204ENST00000475033 PANK3Q9H999 370 aa17.1■□□□□ 0.33
CHRNA4-204ENST00000475033 RALBP1Q15311 655 aa17.1■□□□□ 0.33
CHRNA4-204ENST00000475033 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
CHRNA4-204ENST00000475033 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.33
CHRNA4-204ENST00000475033 RRP1P56182 461 aaKnown RBP17.08■□□□□ 0.32
CHRNA4-204ENST00000475033 NLRP13Q86W25 1043 aa17.07■□□□□ 0.32
CHRNA4-204ENST00000475033 ARXQ96QS3 562 aa17.07■□□□□ 0.32
CHRNA4-204ENST00000475033 KANK1Q14678 1352 aa17.06■□□□□ 0.32
CHRNA4-204ENST00000475033 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
CHRNA4-204ENST00000475033 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
CHRNA4-204ENST00000475033 TNNT2P45379 298 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-204ENST00000475033 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
CHRNA4-204ENST00000475033 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 PLIN1O60240 522 aa17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
CHRNA4-204ENST00000475033 ADGRL2O95490 1459 aa17.02■□□□□ 0.32
CHRNA4-204ENST00000475033 CDCA8Q53HL2 280 aa17.02■□□□□ 0.31
CHRNA4-204ENST00000475033 PKNOX2Q96KN3 472 aa17.02■□□□□ 0.31
CHRNA4-204ENST00000475033 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
CHRNA4-204ENST00000475033 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
CHRNA4-204ENST00000475033 ABCA8O94911 1581 aa16.99■□□□□ 0.31
CHRNA4-204ENST00000475033 FRAT2O75474 233 aaPredicted RBP16.99■□□□□ 0.31
CHRNA4-204ENST00000475033 MS4A1P11836 297 aa16.99■□□□□ 0.31
CHRNA4-204ENST00000475033 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
CHRNA4-204ENST00000475033 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHRNA4-204ENST00000475033 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
CHRNA4-204ENST00000475033 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
CHRNA4-204ENST00000475033 SHANK2Q9UPX8 1470 aa16.95■□□□□ 0.3
CHRNA4-204ENST00000475033 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
CHRNA4-204ENST00000475033 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
CHRNA4-204ENST00000475033 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
CHRNA4-204ENST00000475033 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
CHRNA4-204ENST00000475033 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
CHRNA4-204ENST00000475033 GLIPR1L2Q4G1C9 344 aa16.94■□□□□ 0.3
CHRNA4-204ENST00000475033 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
CHRNA4-204ENST00000475033 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 ADGBQ8N7X0 1667 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
CHRNA4-204ENST00000475033 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
CHRNA4-204ENST00000475033 BRD4O60885 1362 aaPredicted RBP16.92■□□□□ 0.3
CHRNA4-204ENST00000475033 RGS3P49796 1198 aa16.92■□□□□ 0.3
CHRNA4-204ENST00000475033 FAM43AQ8N2R8 423 aa16.92■□□□□ 0.3
CHRNA4-204ENST00000475033 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
CHRNA4-204ENST00000475033 NAP1L5Q96NT1 182 aaPredicted RBP16.91■□□□□ 0.3
CHRNA4-204ENST00000475033 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
CHRNA4-204ENST00000475033 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.29
CHRNA4-204ENST00000475033 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
CHRNA4-204ENST00000475033 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
CHRNA4-204ENST00000475033 PLCH2O75038 1416 aa16.88■□□□□ 0.29
CHRNA4-204ENST00000475033 STK26Q9P289 416 aa16.88■□□□□ 0.29
CHRNA4-204ENST00000475033 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
CHRNA4-204ENST00000475033 ERBINQ96RT1 1412 aa16.88■□□□□ 0.29
CHRNA4-204ENST00000475033 SAMD9LQ8IVG5 1584 aa16.87■□□□□ 0.29
CHRNA4-204ENST00000475033 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
CHRNA4-204ENST00000475033 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
CHRNA4-204ENST00000475033 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
CHRNA4-204ENST00000475033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHRNA4-204ENST00000475033 MLECQ14165 292 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms