RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 PPARGC1BQ86YN6 1023 aaKnown RBP11.13□□□□□ -0.63
LSAMP-203ENST00000474851 CHIC2Q9UKJ5 165 aa11.13□□□□□ -0.63
LSAMP-203ENST00000474851 UHRF1BP1Q6BDS2 1440 aa11.12□□□□□ -0.63
LSAMP-203ENST00000474851 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
LSAMP-203ENST00000474851 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
LSAMP-203ENST00000474851 DAPK1P53355 1430 aa11.1□□□□□ -0.63
LSAMP-203ENST00000474851 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
LSAMP-203ENST00000474851 ILDR1Q86SU0 546 aaPredicted RBP11.1□□□□□ -0.63
LSAMP-203ENST00000474851 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
LSAMP-203ENST00000474851 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
LSAMP-203ENST00000474851 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
LSAMP-203ENST00000474851 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
LSAMP-203ENST00000474851 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
LSAMP-203ENST00000474851 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
LSAMP-203ENST00000474851 PTPN23Q9H3S7 1636 aa11.06□□□□□ -0.64
LSAMP-203ENST00000474851 NCKAP5LQ9HCH0 1330 aa11.06□□□□□ -0.64
LSAMP-203ENST00000474851 TNRQ92752 1358 aa11.05□□□□□ -0.64
LSAMP-203ENST00000474851 DUOX2Q9NRD8 1548 aa11.05□□□□□ -0.64
LSAMP-203ENST00000474851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
LSAMP-203ENST00000474851 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
LSAMP-203ENST00000474851 ERBINQ96RT1 1412 aa11.04□□□□□ -0.64
LSAMP-203ENST00000474851 PZPP20742 1482 aa11.04□□□□□ -0.64
LSAMP-203ENST00000474851 C3P01024 1663 aa11.04□□□□□ -0.64
LSAMP-203ENST00000474851 PKD2Q13563 968 aa11.03□□□□□ -0.64
LSAMP-203ENST00000474851 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
LSAMP-203ENST00000474851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
LSAMP-203ENST00000474851 PTPRTO14522 1441 aa11.02□□□□□ -0.64
LSAMP-203ENST00000474851 ADGRL2O95490 1459 aa11.02□□□□□ -0.65
LSAMP-203ENST00000474851 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
LSAMP-203ENST00000474851 ABCC3O15438 1527 aa11.02□□□□□ -0.65
LSAMP-203ENST00000474851 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.65
LSAMP-203ENST00000474851 THEMISQ8N1K5 641 aaPredicted RBP11.01□□□□□ -0.65
LSAMP-203ENST00000474851 FBXO41Q8TF61 875 aa11.01□□□□□ -0.65
LSAMP-203ENST00000474851 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
LSAMP-203ENST00000474851 A2ML1A8K2U0 1454 aa11□□□□□ -0.65
LSAMP-203ENST00000474851 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
LSAMP-203ENST00000474851 MROH2AA6NES4 1674 aa11□□□□□ -0.65
LSAMP-203ENST00000474851 ROCK1Q13464 1354 aa11□□□□□ -0.65
LSAMP-203ENST00000474851 ARHGAP31Q2M1Z3 1444 aa11□□□□□ -0.65
LSAMP-203ENST00000474851 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
LSAMP-203ENST00000474851 SETD1BQ9UPS6 1966 aaKnown RBP10.99□□□□□ -0.65
LSAMP-203ENST00000474851 CLTCQ00610 1675 aaKnown RBP10.99□□□□□ -0.65
LSAMP-203ENST00000474851 ITGAEP38570 1179 aa10.99□□□□□ -0.65
LSAMP-203ENST00000474851 MROH1Q8NDA8 1641 aa10.98□□□□□ -0.65
LSAMP-203ENST00000474851 PREX1Q8TCU6 1659 aa10.98□□□□□ -0.65
LSAMP-203ENST00000474851 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
LSAMP-203ENST00000474851 PLA2R1Q13018 1463 aa10.98□□□□□ -0.65
LSAMP-203ENST00000474851 RNF17Q9BXT8 1623 aaKnown RBP10.98□□□□□ -0.65
LSAMP-203ENST00000474851 IDI1Q13907 227 aa10.97□□□□□ -0.65
LSAMP-203ENST00000474851 KANK1Q14678 1352 aa10.97□□□□□ -0.65
LSAMP-203ENST00000474851 RRBP1Q9P2E9 1410 aaKnown RBP10.97□□□□□ -0.65
LSAMP-203ENST00000474851 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
LSAMP-203ENST00000474851 NLRP1Q9C000 1473 aa10.97□□□□□ -0.65
LSAMP-203ENST00000474851 CAMSAP1Q5T5Y3 1602 aa10.97□□□□□ -0.65
LSAMP-203ENST00000474851 EIF2AK4Q9P2K8 1649 aaKnown RBP10.95□□□□□ -0.66
LSAMP-203ENST00000474851 CEP170BQ9Y4F5 1589 aaPredicted RBP10.95□□□□□ -0.66
LSAMP-203ENST00000474851 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
LSAMP-203ENST00000474851 LTKP29376 864 aa10.95□□□□□ -0.66
LSAMP-203ENST00000474851 PRDM15P57071 1507 aaPredicted RBP10.94□□□□□ -0.66
LSAMP-203ENST00000474851 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
LSAMP-203ENST00000474851 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
LSAMP-203ENST00000474851 STRCQ7RTU9 1775 aa10.94□□□□□ -0.66
LSAMP-203ENST00000474851 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
LSAMP-203ENST00000474851 VWDEQ8N2E2 1590 aa10.94□□□□□ -0.66
LSAMP-203ENST00000474851 SLC52A1Q9NWF4 448 aa10.93□□□□□ -0.66
LSAMP-203ENST00000474851 NOS1P29475 1434 aa10.92□□□□□ -0.66
LSAMP-203ENST00000474851 NUP155O75694 1391 aa10.91□□□□□ -0.66
LSAMP-203ENST00000474851 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
LSAMP-203ENST00000474851 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
LSAMP-203ENST00000474851 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
LSAMP-203ENST00000474851 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.66
LSAMP-203ENST00000474851 CROCC2H7BZ55 1655 aa10.9□□□□□ -0.66
LSAMP-203ENST00000474851 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
LSAMP-203ENST00000474851 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.67
LSAMP-203ENST00000474851 MED14O60244 1454 aa10.89□□□□□ -0.67
LSAMP-203ENST00000474851 DEPDC5O75140 1603 aa10.89□□□□□ -0.67
LSAMP-203ENST00000474851 NPHP4O75161 1426 aaPredicted RBP10.88□□□□□ -0.67
LSAMP-203ENST00000474851 NAIPQ13075 1403 aa10.88□□□□□ -0.67
LSAMP-203ENST00000474851 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
LSAMP-203ENST00000474851 ZNF142P52746 1687 aaPredicted RBP10.88□□□□□ -0.67
LSAMP-203ENST00000474851 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
LSAMP-203ENST00000474851 EID1Q9Y6B2 187 aa10.87□□□□□ -0.67
LSAMP-203ENST00000474851 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
LSAMP-203ENST00000474851 ZC3H13Q5T200 1668 aaKnown RBP10.86□□□□□ -0.67
LSAMP-203ENST00000474851 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
LSAMP-203ENST00000474851 NEURL4Q96JN8 1562 aa10.85□□□□□ -0.67
LSAMP-203ENST00000474851 SLIT1O75093 1534 aa10.84□□□□□ -0.67
LSAMP-203ENST00000474851 HFM1A2PYH4 1435 aa10.84□□□□□ -0.67
LSAMP-203ENST00000474851 SCAF11Q99590 1463 aaKnown RBP10.83□□□□□ -0.68
LSAMP-203ENST00000474851 SYNMO15061 1565 aa10.82□□□□□ -0.68
LSAMP-203ENST00000474851 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
LSAMP-203ENST00000474851 SLC26A8Q96RN1 970 aa10.82□□□□□ -0.68
LSAMP-203ENST00000474851 IQSEC2Q5JU85 1478 aa10.81□□□□□ -0.68
LSAMP-203ENST00000474851 CEP152O94986 1710 aa10.81□□□□□ -0.68
LSAMP-203ENST00000474851 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
LSAMP-203ENST00000474851 CHGAP10645 457 aaKnown RBP10.8□□□□□ -0.68
LSAMP-203ENST00000474851 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
LSAMP-203ENST00000474851 ZFYVE9O95405 1425 aa10.8□□□□□ -0.68
LSAMP-203ENST00000474851 UNC13BO14795 1591 aa10.8□□□□□ -0.68
LSAMP-203ENST00000474851 KCNA6P17658 529 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms