RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
SRRM1-210ENST00000474843 KRTAP3-3Q9BYR6 98 aa11.25□□□□□ -0.61
SRRM1-210ENST00000474843 KRTAP3-2Q9BYR7 98 aa11.25□□□□□ -0.61
SRRM1-210ENST00000474843 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
SRRM1-210ENST00000474843 NUTM2FA1L443 756 aa11.24□□□□□ -0.61
SRRM1-210ENST00000474843 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
SRRM1-210ENST00000474843 GPIHBP1Q8IV16 184 aa11.24□□□□□ -0.61
SRRM1-210ENST00000474843 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
SRRM1-210ENST00000474843 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
SRRM1-210ENST00000474843 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
SRRM1-210ENST00000474843 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-210ENST00000474843 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
SRRM1-210ENST00000474843 C6orf132Q5T0Z8 1188 aa11.17□□□□□ -0.62
SRRM1-210ENST00000474843 ZNF687Q8N1G0 1237 aa11.17□□□□□ -0.62
SRRM1-210ENST00000474843 GPR37O15354 613 aa11.16□□□□□ -0.62
SRRM1-210ENST00000474843 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
SRRM1-210ENST00000474843 KCNK17Q96T54 332 aa11.15□□□□□ -0.62
SRRM1-210ENST00000474843 PTPREP23469 700 aa11.13□□□□□ -0.63
SRRM1-210ENST00000474843 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
SRRM1-210ENST00000474843 FCHSD2O94868 740 aa11.12□□□□□ -0.63
SRRM1-210ENST00000474843 COL9A1P20849 921 aa11.12□□□□□ -0.63
SRRM1-210ENST00000474843 PSEN2P49810 448 aa11.12□□□□□ -0.63
SRRM1-210ENST00000474843 PTGDRQ13258 359 aa11.12□□□□□ -0.63
SRRM1-210ENST00000474843 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
SRRM1-210ENST00000474843 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-210ENST00000474843 GNPATO15228 680 aa11.08□□□□□ -0.64
SRRM1-210ENST00000474843 FECHP22830 423 aa11.08□□□□□ -0.64
SRRM1-210ENST00000474843 KCNH8Q96L42 1107 aa11.08□□□□□ -0.64
SRRM1-210ENST00000474843 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
SRRM1-210ENST00000474843 ZMYND10O75800 440 aa11.07□□□□□ -0.64
SRRM1-210ENST00000474843 HIC1Q14526 733 aa11.07□□□□□ -0.64
SRRM1-210ENST00000474843 ARHGAP33O14559 1287 aa11.06□□□□□ -0.64
SRRM1-210ENST00000474843 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
SRRM1-210ENST00000474843 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
SRRM1-210ENST00000474843 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
SRRM1-210ENST00000474843 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
SRRM1-210ENST00000474843 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
SRRM1-210ENST00000474843 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
SRRM1-210ENST00000474843 PBX2P40425 430 aa11.03□□□□□ -0.64
SRRM1-210ENST00000474843 KRI1Q8N9T8 703 aaKnown RBP11.03□□□□□ -0.64
SRRM1-210ENST00000474843 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
SRRM1-210ENST00000474843 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
SRRM1-210ENST00000474843 MYT1LQ9UL68 1186 aa11.03□□□□□ -0.64
SRRM1-210ENST00000474843 PRSS12P56730 875 aa11.02□□□□□ -0.65
SRRM1-210ENST00000474843 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
SRRM1-210ENST00000474843 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
SRRM1-210ENST00000474843 FAM198AQ9UFP1 575 aa11.01□□□□□ -0.65
SRRM1-210ENST00000474843 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
SRRM1-210ENST00000474843 TSKSQ9UJT2 592 aa11□□□□□ -0.65
SRRM1-210ENST00000474843 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
SRRM1-210ENST00000474843 TRIM6-TRIM34B2RNG4 842 aa10.98□□□□□ -0.65
SRRM1-210ENST00000474843 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
SRRM1-210ENST00000474843 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
SRRM1-210ENST00000474843 LSM11P83369 360 aaKnown RBP eCLIP10.96□□□□□ -0.65
SRRM1-210ENST00000474843 C3orf80F5H4A9 247 aa10.95□□□□□ -0.66
SRRM1-210ENST00000474843 TTC13Q8NBP0 860 aa10.95□□□□□ -0.66
SRRM1-210ENST00000474843 MINK1Q8N4C8 1332 aaPredicted RBP10.94□□□□□ -0.66
SRRM1-210ENST00000474843 SMAPO00193 183 aa10.94□□□□□ -0.66
SRRM1-210ENST00000474843 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
SRRM1-210ENST00000474843 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
SRRM1-210ENST00000474843 IRF6O14896 467 aa10.93□□□□□ -0.66
SRRM1-210ENST00000474843 PNMA3Q9UL41 463 aa10.93□□□□□ -0.66
SRRM1-210ENST00000474843 ADGRG1Q9Y653 693 aa10.93□□□□□ -0.66
SRRM1-210ENST00000474843 NUDT18Q6ZVK8 323 aa10.92□□□□□ -0.66
SRRM1-210ENST00000474843 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
SRRM1-210ENST00000474843 ADGRD1Q6QNK2 874 aa10.91□□□□□ -0.66
SRRM1-210ENST00000474843 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
SRRM1-210ENST00000474843 AK7Q96M32 723 aa10.91□□□□□ -0.66
SRRM1-210ENST00000474843 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-210ENST00000474843 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
SRRM1-210ENST00000474843 TATDN2Q93075 761 aa10.9□□□□□ -0.66
SRRM1-210ENST00000474843 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
SRRM1-210ENST00000474843 RABGEF1Q9UJ41 708 aa10.89□□□□□ -0.67
SRRM1-210ENST00000474843 TRIM66O15016 1216 aa10.88□□□□□ -0.67
SRRM1-210ENST00000474843 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
SRRM1-210ENST00000474843 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
SRRM1-210ENST00000474843 TK2O00142 265 aa10.87□□□□□ -0.67
SRRM1-210ENST00000474843 ONECUT3O60422 494 aaPredicted RBP10.87□□□□□ -0.67
SRRM1-210ENST00000474843 RBM46Q8TBY0 533 aaKnown RBP10.87□□□□□ -0.67
SRRM1-210ENST00000474843 OATP04181 439 aa10.86□□□□□ -0.67
SRRM1-210ENST00000474843 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
SRRM1-210ENST00000474843 EYA1Q99502 592 aa10.84□□□□□ -0.67
SRRM1-210ENST00000474843 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
SRRM1-210ENST00000474843 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
SRRM1-210ENST00000474843 HRO43593 1189 aa10.83□□□□□ -0.68
SRRM1-210ENST00000474843 BHMG1C9JSJ3 638 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-210ENST00000474843 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-210ENST00000474843 PDE4DQ08499 809 aa10.82□□□□□ -0.68
SRRM1-210ENST00000474843 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
SRRM1-210ENST00000474843 MRPL50Q8N5N7 158 aaKnown RBP10.82□□□□□ -0.68
SRRM1-210ENST00000474843 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
SRRM1-210ENST00000474843 AMHR2Q16671 573 aa10.8□□□□□ -0.68
SRRM1-210ENST00000474843 STAC3Q96MF2 364 aa10.8□□□□□ -0.68
SRRM1-210ENST00000474843 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
SRRM1-210ENST00000474843 DNAJB2P25686 324 aa10.79□□□□□ -0.68
SRRM1-210ENST00000474843 FAM98CQ17RN3 349 aaKnown RBP10.79□□□□□ -0.68
SRRM1-210ENST00000474843 PARP9Q8IXQ6 854 aa10.79□□□□□ -0.68
SRRM1-210ENST00000474843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
SRRM1-210ENST00000474843 BRPF1P55201 1214 aaPredicted RBP10.78□□□□□ -0.68
SRRM1-210ENST00000474843 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms