RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 IQSEC2Q5JU85 1478 aa5.7□□□□□ -1.5
USP16-205ENST00000474835 HNRNPUL2Q1KMD3 747 aaKnown RBP5.7□□□□□ -1.5
USP16-205ENST00000474835 URB2Q14146 1524 aaKnown RBP5.69□□□□□ -1.5
USP16-205ENST00000474835 DAPK1P53355 1430 aa5.69□□□□□ -1.5
USP16-205ENST00000474835 KIAA1107Q9UPP5 1409 aa5.69□□□□□ -1.5
USP16-205ENST00000474835 UHRF1BP1LA0JNW5 1464 aa5.69□□□□□ -1.5
USP16-205ENST00000474835 BACH2Q9BYV9 841 aa5.69□□□□□ -1.5
USP16-205ENST00000474835 ABCC5O15440 1437 aa5.68□□□□□ -1.5
USP16-205ENST00000474835 REREQ9P2R6 1566 aa5.68□□□□□ -1.5
USP16-205ENST00000474835 CDK13Q14004 1512 aaKnown RBP5.68□□□□□ -1.5
USP16-205ENST00000474835 FSD2A1L4K1 749 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 ADRA2BP18089 450 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 CARMIL1Q5VZK9 1371 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 FAM43AQ8N2R8 423 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 FAM135AQ9P2D6 1515 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 DDIT3P35638 169 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 SIN3AQ96ST3 1273 aa5.67□□□□□ -1.5
USP16-205ENST00000474835 CCDC136Q96JN2 1154 aa5.66□□□□□ -1.5
USP16-205ENST00000474835 ADGRB1O14514 1584 aa5.66□□□□□ -1.5
USP16-205ENST00000474835 TRMT2AQ8IZ69 625 aaKnown RBP5.66□□□□□ -1.5
USP16-205ENST00000474835 ANTXR1Q9H6X2 564 aa5.66□□□□□ -1.5
USP16-205ENST00000474835 BRD4O60885 1362 aaPredicted RBP5.66□□□□□ -1.5
USP16-205ENST00000474835 NUP153P49790 1475 aaKnown RBP5.66□□□□□ -1.5
USP16-205ENST00000474835 CRYBG1Q9Y4K1 1723 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 PRDM4Q9UKN5 801 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 CCDC141Q6ZP82 1450 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 WDR7Q9Y4E6 1490 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 KIF7Q2M1P5 1343 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 DCAF11Q8TEB1 546 aa5.65□□□□□ -1.5
USP16-205ENST00000474835 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.5
USP16-205ENST00000474835 KDM5AP29375 1690 aaKnown RBP5.65□□□□□ -1.51
USP16-205ENST00000474835 SETD1AO15047 1707 aaKnown RBP5.65□□□□□ -1.51
USP16-205ENST00000474835 ITGAEP38570 1179 aa5.64□□□□□ -1.51
USP16-205ENST00000474835 CLTCQ00610 1675 aaKnown RBP5.64□□□□□ -1.51
USP16-205ENST00000474835 DDX10Q13206 875 aaKnown RBP5.64□□□□□ -1.51
USP16-205ENST00000474835 NUDCQ9Y266 331 aa5.64□□□□□ -1.51
USP16-205ENST00000474835 CDC42BPGQ6DT37 1551 aa5.64□□□□□ -1.51
USP16-205ENST00000474835 NRXN1Q9ULB1 1477 aa5.64□□□□□ -1.51
USP16-205ENST00000474835 IBTKQ9P2D0 1353 aaPredicted RBP5.63□□□□□ -1.51
USP16-205ENST00000474835 CADPSQ9ULU8 1353 aa5.63□□□□□ -1.51
USP16-205ENST00000474835 SAMD9LQ8IVG5 1584 aa5.63□□□□□ -1.51
USP16-205ENST00000474835 MROH1Q8NDA8 1641 aa5.63□□□□□ -1.51
USP16-205ENST00000474835 NUP160Q12769 1436 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 TTC37Q6PGP7 1564 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 NBPF8Q3BBV2 869 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 PREX1Q8TCU6 1659 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 C8orf34Q49A92 452 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 CFAP74Q9C0B2 1584 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 PIK3C2BO00750 1634 aa5.62□□□□□ -1.51
USP16-205ENST00000474835 CDK11AQ9UQ88 783 aaPredicted RBP5.61□□□□□ -1.51
USP16-205ENST00000474835 HSPA5P11021 654 aaKnown RBP5.61□□□□□ -1.51
USP16-205ENST00000474835 NPC1L1Q9UHC9 1359 aa5.61□□□□□ -1.51
USP16-205ENST00000474835 TCERG1O14776 1098 aaKnown RBP5.61□□□□□ -1.51
USP16-205ENST00000474835 PRAG1Q86YV5 1406 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 PER1O15534 1290 aaPredicted RBP5.6□□□□□ -1.51
USP16-205ENST00000474835 UBTFP17480 764 aaKnown RBP5.6□□□□□ -1.51
USP16-205ENST00000474835 KNDC1Q76NI1 1749 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 FANCD2Q9BXW9 1451 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 EIF3AQ14152 1382 aaKnown RBP5.6□□□□□ -1.51
USP16-205ENST00000474835 SETBP1Q9Y6X0 1596 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 RSPH6AQ9H0K4 717 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 PPLO60437 1756 aa5.6□□□□□ -1.51
USP16-205ENST00000474835 MROH2AA6NES4 1674 aa5.59□□□□□ -1.51
USP16-205ENST00000474835 ANP32CO43423 234 aa5.59□□□□□ -1.51
USP16-205ENST00000474835 ZNF692Q9BU19 519 aaPredicted RBP5.59□□□□□ -1.51
USP16-205ENST00000474835 KANK1Q14678 1352 aa5.59□□□□□ -1.51
USP16-205ENST00000474835 GPATCH8Q9UKJ3 1502 aaKnown RBP5.59□□□□□ -1.51
USP16-205ENST00000474835 ZCCHC11Q5TAX3 1644 aaKnown RBP5.59□□□□□ -1.51
USP16-205ENST00000474835 PLB1Q6P1J6 1458 aa5.59□□□□□ -1.52
USP16-205ENST00000474835 TRIM52Q96A61 297 aa5.59□□□□□ -1.52
USP16-205ENST00000474835 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.52
USP16-205ENST00000474835 PIK3C2GO75747 1445 aa5.58□□□□□ -1.52
USP16-205ENST00000474835 MTUS2Q5JR59 1369 aa5.58□□□□□ -1.52
USP16-205ENST00000474835 MAGI1Q96QZ7 1491 aaPredicted RBP5.58□□□□□ -1.52
USP16-205ENST00000474835 RAD54L2Q9Y4B4 1467 aa5.58□□□□□ -1.52
USP16-205ENST00000474835 MAP3K4Q9Y6R4 1608 aa5.58□□□□□ -1.52
USP16-205ENST00000474835 A2MP01023 1474 aa5.58□□□□□ -1.52
USP16-205ENST00000474835 TRPM2O94759 1503 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 ABCA9Q8IUA7 1624 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 GSE1Q14687 1217 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 BCANQ96GW7 911 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 TET3O43151 1660 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 ZNF518AQ6AHZ1 1483 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 ITSN1Q15811 1721 aa5.57□□□□□ -1.52
USP16-205ENST00000474835 CAMSAP1Q5T5Y3 1602 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 ADGRL1O94910 1474 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 DDX60Q8IY21 1712 aaKnown RBP5.56□□□□□ -1.52
USP16-205ENST00000474835 RRP1P56182 461 aaKnown RBP5.56□□□□□ -1.52
USP16-205ENST00000474835 CLEC17AQ6ZS10 378 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 QRICH2Q9H0J4 1663 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 SYCP2Q9BX26 1530 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 CLCN1P35523 988 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 ANKRD50Q9ULJ7 1429 aa5.56□□□□□ -1.52
USP16-205ENST00000474835 SCAF11Q99590 1463 aaKnown RBP5.56□□□□□ -1.52
USP16-205ENST00000474835 PDE4AP27815 886 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 B4GALNT3Q6L9W6 998 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 MYH15Q9Y2K3 1946 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 ARHGEF28Q8N1W1 1705 aaKnown RBP5.55□□□□□ -1.52
USP16-205ENST00000474835 TERF1P54274 439 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 BRPF3Q9ULD4 1205 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms