RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
NPAS2-208ENST00000474550 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
NPAS2-208ENST00000474550 GSE1Q14687 1217 aa13.13□□□□□ -0.31
NPAS2-208ENST00000474550 MCCP23508 829 aa13.13□□□□□ -0.31
NPAS2-208ENST00000474550 NAIPQ13075 1403 aa13.12□□□□□ -0.31
NPAS2-208ENST00000474550 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
NPAS2-208ENST00000474550 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
NPAS2-208ENST00000474550 CHMP4AQ9BY43 222 aa13.12□□□□□ -0.31
NPAS2-208ENST00000474550 FOXD1Q16676 465 aa13.12□□□□□ -0.31
NPAS2-208ENST00000474550 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
NPAS2-208ENST00000474550 IQGAP2Q13576 1575 aa13.11□□□□□ -0.31
NPAS2-208ENST00000474550 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
NPAS2-208ENST00000474550 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
NPAS2-208ENST00000474550 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
NPAS2-208ENST00000474550 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
NPAS2-208ENST00000474550 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
NPAS2-208ENST00000474550 GOLGA6L3A6NEY3 463 aa13.1□□□□□ -0.31
NPAS2-208ENST00000474550 PTMAP06454 111 aaKnown RBP13.09□□□□□ -0.31
NPAS2-208ENST00000474550 DAPK1P53355 1430 aa13.08□□□□□ -0.31
NPAS2-208ENST00000474550 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.31
NPAS2-208ENST00000474550 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
NPAS2-208ENST00000474550 ST20-MTHFSA0A0A6YYL1 179 aa13.08□□□□□ -0.32
NPAS2-208ENST00000474550 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
NPAS2-208ENST00000474550 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
NPAS2-208ENST00000474550 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
NPAS2-208ENST00000474550 EPRSP07814 1512 aaKnown RBP13.06□□□□□ -0.32
NPAS2-208ENST00000474550 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
NPAS2-208ENST00000474550 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
NPAS2-208ENST00000474550 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
NPAS2-208ENST00000474550 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
NPAS2-208ENST00000474550 NESP48681 1621 aa13.05□□□□□ -0.32
NPAS2-208ENST00000474550 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
NPAS2-208ENST00000474550 ARXQ96QS3 562 aa13.04□□□□□ -0.32
NPAS2-208ENST00000474550 POGKQ9P215 609 aa13.03□□□□□ -0.32
NPAS2-208ENST00000474550 NRDCO43847 1150 aa13.03□□□□□ -0.32
NPAS2-208ENST00000474550 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
NPAS2-208ENST00000474550 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
NPAS2-208ENST00000474550 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
NPAS2-208ENST00000474550 PHF14O94880 888 aa13.02□□□□□ -0.33
NPAS2-208ENST00000474550 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
NPAS2-208ENST00000474550 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
NPAS2-208ENST00000474550 PANK3Q9H999 370 aa13.01□□□□□ -0.33
NPAS2-208ENST00000474550 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 DNTTIP2Q5QJE6 756 aaKnown RBP13□□□□□ -0.33
NPAS2-208ENST00000474550 JPH4Q96JJ6 628 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 KIF14Q15058 1648 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
NPAS2-208ENST00000474550 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 C9orf84Q5VXU9 1444 aa13□□□□□ -0.33
NPAS2-208ENST00000474550 ZRSR1Q15695 479 aaKnown RBP13□□□□□ -0.33
NPAS2-208ENST00000474550 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
NPAS2-208ENST00000474550 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
NPAS2-208ENST00000474550 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
NPAS2-208ENST00000474550 CRBNQ96SW2 442 aa12.98□□□□□ -0.33
NPAS2-208ENST00000474550 PTPRGP23470 1445 aa12.98□□□□□ -0.33
NPAS2-208ENST00000474550 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
NPAS2-208ENST00000474550 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
NPAS2-208ENST00000474550 HMMRO75330 724 aa12.97□□□□□ -0.33
NPAS2-208ENST00000474550 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
NPAS2-208ENST00000474550 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
NPAS2-208ENST00000474550 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
NPAS2-208ENST00000474550 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
NPAS2-208ENST00000474550 ZKSCAN2Q63HK3 967 aa12.96□□□□□ -0.33
NPAS2-208ENST00000474550 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.33
NPAS2-208ENST00000474550 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.33
NPAS2-208ENST00000474550 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
NPAS2-208ENST00000474550 HNRNPMP52272 730 aaKnown RBP eCLIP12.96□□□□□ -0.34
NPAS2-208ENST00000474550 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.34
NPAS2-208ENST00000474550 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
NPAS2-208ENST00000474550 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
NPAS2-208ENST00000474550 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
NPAS2-208ENST00000474550 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
NPAS2-208ENST00000474550 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
NPAS2-208ENST00000474550 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPAS2-208ENST00000474550 ST18O60284 1047 aa12.95□□□□□ -0.34
NPAS2-208ENST00000474550 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
NPAS2-208ENST00000474550 CAMSAP2Q08AD1 1489 aa12.94□□□□□ -0.34
NPAS2-208ENST00000474550 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
NPAS2-208ENST00000474550 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
NPAS2-208ENST00000474550 KIF16BQ96L93 1317 aa12.94□□□□□ -0.34
NPAS2-208ENST00000474550 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
NPAS2-208ENST00000474550 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
NPAS2-208ENST00000474550 RUNDC1Q96C34 613 aa12.92□□□□□ -0.34
NPAS2-208ENST00000474550 ARHGEF12Q9NZN5 1544 aa12.91□□□□□ -0.34
NPAS2-208ENST00000474550 SLKQ9H2G2 1235 aaPredicted RBP12.91□□□□□ -0.34
NPAS2-208ENST00000474550 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
NPAS2-208ENST00000474550 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
NPAS2-208ENST00000474550 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
NPAS2-208ENST00000474550 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
NPAS2-208ENST00000474550 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
NPAS2-208ENST00000474550 INSRP06213 1382 aa12.89□□□□□ -0.35
NPAS2-208ENST00000474550 ADGBQ8N7X0 1667 aa12.89□□□□□ -0.35
NPAS2-208ENST00000474550 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
NPAS2-208ENST00000474550 FAM43AQ8N2R8 423 aa12.89□□□□□ -0.35
NPAS2-208ENST00000474550 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
NPAS2-208ENST00000474550 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
NPAS2-208ENST00000474550 GOLGA6L4A6NEF3 574 aa12.88□□□□□ -0.35
NPAS2-208ENST00000474550 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms