RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 PPP4R2Q9NY27 417 aa20.54■□□□□ 0.88
TMCO3-207ENST00000474393 ARAP3Q8WWN8 1544 aa20.54■□□□□ 0.88
TMCO3-207ENST00000474393 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
TMCO3-207ENST00000474393 FAM135AQ9P2D6 1515 aa20.52■□□□□ 0.88
TMCO3-207ENST00000474393 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
TMCO3-207ENST00000474393 DUOX2Q9NRD8 1548 aa20.5■□□□□ 0.87
TMCO3-207ENST00000474393 RTN4Q9NQC3 1192 aaKnown RBP20.5■□□□□ 0.87
TMCO3-207ENST00000474393 NOP58Q9Y2X3 529 aaKnown RBP20.5■□□□□ 0.87
TMCO3-207ENST00000474393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.873e-6■□□□□ 10.2
TMCO3-207ENST00000474393 UNC13BO14795 1591 aa20.5■□□□□ 0.87
TMCO3-207ENST00000474393 ABCA9Q8IUA7 1624 aa20.49■□□□□ 0.87
TMCO3-207ENST00000474393 NPM1P06748 294 aaKnown RBP eCLIP20.49■□□□□ 0.87
TMCO3-207ENST00000474393 FANCAO15360 1455 aa20.47■□□□□ 0.87
TMCO3-207ENST00000474393 SPAG9O60271 1321 aaKnown RBP20.47■□□□□ 0.87
TMCO3-207ENST00000474393 AFAP1Q8N556 730 aa20.46■□□□□ 0.87
TMCO3-207ENST00000474393 ERBINQ96RT1 1412 aa20.46■□□□□ 0.87
TMCO3-207ENST00000474393 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
TMCO3-207ENST00000474393 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
TMCO3-207ENST00000474393 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
TMCO3-207ENST00000474393 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
TMCO3-207ENST00000474393 IQGAP3Q86VI3 1631 aa20.42■□□□□ 0.86
TMCO3-207ENST00000474393 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
TMCO3-207ENST00000474393 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
TMCO3-207ENST00000474393 ZFYVE16Q7Z3T8 1539 aa20.41■□□□□ 0.86
TMCO3-207ENST00000474393 IL27Q8NEV9 243 aa20.4■□□□□ 0.86
TMCO3-207ENST00000474393 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
TMCO3-207ENST00000474393 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
TMCO3-207ENST00000474393 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
TMCO3-207ENST00000474393 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
TMCO3-207ENST00000474393 SPATA31E1Q6ZUB1 1445 aa20.37■□□□□ 0.85
TMCO3-207ENST00000474393 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
TMCO3-207ENST00000474393 UHRF1BP1Q6BDS2 1440 aa20.36■□□□□ 0.85
TMCO3-207ENST00000474393 MYT1LQ9UL68 1186 aa20.36■□□□□ 0.85
TMCO3-207ENST00000474393 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
TMCO3-207ENST00000474393 ATP7AQ04656 1500 aa20.35■□□□□ 0.85
TMCO3-207ENST00000474393 DCAF11Q8TEB1 546 aa20.35■□□□□ 0.85
TMCO3-207ENST00000474393 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
TMCO3-207ENST00000474393 PLA2R1Q13018 1463 aa20.35■□□□□ 0.85
TMCO3-207ENST00000474393 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
TMCO3-207ENST00000474393 INO80Q9ULG1 1556 aaPredicted RBP20.34■□□□□ 0.85
TMCO3-207ENST00000474393 USP47Q96K76 1375 aa20.32■□□□□ 0.84
TMCO3-207ENST00000474393 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
TMCO3-207ENST00000474393 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
TMCO3-207ENST00000474393 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
TMCO3-207ENST00000474393 POLR3GLQ9BT43 218 aa20.31■□□□□ 0.84
TMCO3-207ENST00000474393 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
TMCO3-207ENST00000474393 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
TMCO3-207ENST00000474393 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
TMCO3-207ENST00000474393 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
TMCO3-207ENST00000474393 KIF7Q2M1P5 1343 aa20.28■□□□□ 0.84
TMCO3-207ENST00000474393 ATP10AO60312 1499 aa20.28■□□□□ 0.84
TMCO3-207ENST00000474393 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
TMCO3-207ENST00000474393 POLR1AO95602 1720 aaPredicted RBP20.27■□□□□ 0.84
TMCO3-207ENST00000474393 KDM5CP41229 1560 aa20.27■□□□□ 0.84
TMCO3-207ENST00000474393 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.84
TMCO3-207ENST00000474393 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
TMCO3-207ENST00000474393 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
TMCO3-207ENST00000474393 DEPDC5O75140 1603 aa20.25■□□□□ 0.83
TMCO3-207ENST00000474393 KIF3BO15066 747 aa20.25■□□□□ 0.83
TMCO3-207ENST00000474393 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
TMCO3-207ENST00000474393 ERICH6BQ5W0A0 696 aa20.25■□□□□ 0.83
TMCO3-207ENST00000474393 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
TMCO3-207ENST00000474393 DHX29Q7Z478 1369 aaKnown RBP20.24■□□□□ 0.83
TMCO3-207ENST00000474393 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
TMCO3-207ENST00000474393 E9PCH4 1651 aa20.24■□□□□ 0.83
TMCO3-207ENST00000474393 KANK1Q14678 1352 aa20.23■□□□□ 0.83
TMCO3-207ENST00000474393 A2MP01023 1474 aa20.23■□□□□ 0.83
TMCO3-207ENST00000474393 KIDINS220Q9ULH0 1771 aa20.23■□□□□ 0.83
TMCO3-207ENST00000474393 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
TMCO3-207ENST00000474393 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
TMCO3-207ENST00000474393 BCORL1Q5H9F3 1711 aa20.21■□□□□ 0.83
TMCO3-207ENST00000474393 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
TMCO3-207ENST00000474393 EIF2AK4Q9P2K8 1649 aaKnown RBP20.21■□□□□ 0.83
TMCO3-207ENST00000474393 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
TMCO3-207ENST00000474393 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
TMCO3-207ENST00000474393 TET3O43151 1660 aa20.19■□□□□ 0.82
TMCO3-207ENST00000474393 TRPM1Q7Z4N2 1603 aa20.18■□□□□ 0.82
TMCO3-207ENST00000474393 VWDEQ8N2E2 1590 aa20.18■□□□□ 0.82
TMCO3-207ENST00000474393 TRPM2O94759 1503 aa20.16■□□□□ 0.82
TMCO3-207ENST00000474393 PRDM15P57071 1507 aaPredicted RBP20.16■□□□□ 0.82
TMCO3-207ENST00000474393 SPHKAPQ2M3C7 1700 aa20.16■□□□□ 0.82
TMCO3-207ENST00000474393 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
TMCO3-207ENST00000474393 MROH1Q8NDA8 1641 aa20.15■□□□□ 0.82
TMCO3-207ENST00000474393 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.82
TMCO3-207ENST00000474393 PTPRTO14522 1441 aa20.14■□□□□ 0.82
TMCO3-207ENST00000474393 NEO1Q92859 1461 aa20.13■□□□□ 0.81
TMCO3-207ENST00000474393 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
TMCO3-207ENST00000474393 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
TMCO3-207ENST00000474393 HECW2Q9P2P5 1572 aa20.12■□□□□ 0.81
TMCO3-207ENST00000474393 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
TMCO3-207ENST00000474393 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
TMCO3-207ENST00000474393 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
TMCO3-207ENST00000474393 NEFMP07197 916 aa20.12■□□□□ 0.81
TMCO3-207ENST00000474393 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
TMCO3-207ENST00000474393 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
TMCO3-207ENST00000474393 GPRASP1Q5JY77 1395 aa20.1■□□□□ 0.81
TMCO3-207ENST00000474393 CEP152O94986 1710 aa20.1■□□□□ 0.81
TMCO3-207ENST00000474393 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
TMCO3-207ENST00000474393 RNF17Q9BXT8 1623 aaKnown RBP20.07■□□□□ 0.8
TMCO3-207ENST00000474393 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms