RNA–Protein interactions for RNA: ENST00000474311.1

NEPRO-215, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 1,671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-215ENST00000474311 PBXIP1Q96AQ6 731 aa11□□□□□ -0.65
NEPRO-215ENST00000474311 SNRKQ9NRH2 765 aa11□□□□□ -0.65
NEPRO-215ENST00000474311 DPYSL4O14531 572 aa10.99□□□□□ -0.65
NEPRO-215ENST00000474311 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
NEPRO-215ENST00000474311 GNPATO15228 680 aa10.98□□□□□ -0.65
NEPRO-215ENST00000474311 KIAA1522Q9P206 1035 aaPredicted RBP10.98□□□□□ -0.65
NEPRO-215ENST00000474311 NUTM2FA1L443 756 aa10.98□□□□□ -0.65
NEPRO-215ENST00000474311 PDIA6Q15084 440 aa10.98□□□□□ -0.65
NEPRO-215ENST00000474311 GLMNQ92990 594 aa10.98□□□□□ -0.65
NEPRO-215ENST00000474311 TBC1D12O60347 775 aa10.96□□□□□ -0.65
NEPRO-215ENST00000474311 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.65
NEPRO-215ENST00000474311 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.95□□□□□ -0.66
NEPRO-215ENST00000474311 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
NEPRO-215ENST00000474311 POM121CA8CG34 1229 aa10.95□□□□□ -0.66
NEPRO-215ENST00000474311 SOX12O15370 315 aa10.95□□□□□ -0.66
NEPRO-215ENST00000474311 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
NEPRO-215ENST00000474311 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
NEPRO-215ENST00000474311 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
NEPRO-215ENST00000474311 FAM9AQ8IZU1 332 aaPredicted RBP10.93□□□□□ -0.66
NEPRO-215ENST00000474311 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
NEPRO-215ENST00000474311 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
NEPRO-215ENST00000474311 EVX2Q03828 476 aa10.92□□□□□ -0.66
NEPRO-215ENST00000474311 UBE2Q2Q8WVN8 375 aa10.92□□□□□ -0.66
NEPRO-215ENST00000474311 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
NEPRO-215ENST00000474311 RFX1P22670 979 aa10.92□□□□□ -0.66
NEPRO-215ENST00000474311 EMILIN3Q9NT22 766 aa10.92□□□□□ -0.66
NEPRO-215ENST00000474311 SPATA32Q96LK8 384 aa10.91□□□□□ -0.66
NEPRO-215ENST00000474311 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEPRO-215ENST00000474311 POLR3EQ9NVU0 708 aa10.91□□□□□ -0.66
NEPRO-215ENST00000474311 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
NEPRO-215ENST00000474311 HIC1Q14526 733 aa10.9□□□□□ -0.66
NEPRO-215ENST00000474311 TXNDC2Q86VQ3 553 aa10.89□□□□□ -0.67
NEPRO-215ENST00000474311 BANK1Q8NDB2 785 aa10.89□□□□□ -0.67
NEPRO-215ENST00000474311 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
NEPRO-215ENST00000474311 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
NEPRO-215ENST00000474311 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
NEPRO-215ENST00000474311 C19orf67A6NJJ6 358 aa10.87□□□□□ -0.67
NEPRO-215ENST00000474311 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
NEPRO-215ENST00000474311 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
NEPRO-215ENST00000474311 VRTNQ9H8Y1 702 aa10.86□□□□□ -0.67
NEPRO-215ENST00000474311 CFAP70Q5T0N1 1121 aa10.85□□□□□ -0.67
NEPRO-215ENST00000474311 GRXCR2A6NFK2 248 aa10.85□□□□□ -0.67
NEPRO-215ENST00000474311 RFC5P40937 340 aa10.85□□□□□ -0.67
NEPRO-215ENST00000474311 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
NEPRO-215ENST00000474311 FCHSD2O94868 740 aa10.84□□□□□ -0.67
NEPRO-215ENST00000474311 FBXO31Q5XUX0 539 aaPredicted RBP10.84□□□□□ -0.67
NEPRO-215ENST00000474311 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
NEPRO-215ENST00000474311 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
NEPRO-215ENST00000474311 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
NEPRO-215ENST00000474311 ABL2P42684 1182 aa10.83□□□□□ -0.68
NEPRO-215ENST00000474311 SREK1Q8WXA9 508 aaKnown RBP10.82□□□□□ -0.68
NEPRO-215ENST00000474311 ARID4BQ4LE39 1312 aaPredicted RBP10.82□□□□□ -0.68
NEPRO-215ENST00000474311 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
NEPRO-215ENST00000474311 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
NEPRO-215ENST00000474311 TCF3P15923 654 aa10.81□□□□□ -0.68
NEPRO-215ENST00000474311 ZNF579Q8NAF0 562 aaKnown RBP10.81□□□□□ -0.68
NEPRO-215ENST00000474311 GNEQ9Y223 722 aaKnown RBP10.81□□□□□ -0.68
NEPRO-215ENST00000474311 TMEM88BA6NKF7 163 aa10.8□□□□□ -0.68
NEPRO-215ENST00000474311 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
NEPRO-215ENST00000474311 OSBPP22059 807 aa10.79□□□□□ -0.68
NEPRO-215ENST00000474311 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
NEPRO-215ENST00000474311 ADAMTS19Q8TE59 1207 aa10.79□□□□□ -0.68
NEPRO-215ENST00000474311 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
NEPRO-215ENST00000474311 MYSM1Q5VVJ2 828 aa10.79□□□□□ -0.68
NEPRO-215ENST00000474311 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
NEPRO-215ENST00000474311 ZNF16P17020 682 aaPredicted RBP10.78□□□□□ -0.68
NEPRO-215ENST00000474311 CLCN1P35523 988 aa10.78□□□□□ -0.68
NEPRO-215ENST00000474311 DNAJC14Q6Y2X3 702 aaPredicted RBP10.78□□□□□ -0.68
NEPRO-215ENST00000474311 HDGFL1Q5TGJ6 251 aa10.77□□□□□ -0.69
NEPRO-215ENST00000474311 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
NEPRO-215ENST00000474311 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
NEPRO-215ENST00000474311 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
NEPRO-215ENST00000474311 KDM4AO75164 1064 aa10.76□□□□□ -0.69
NEPRO-215ENST00000474311 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
NEPRO-215ENST00000474311 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
NEPRO-215ENST00000474311 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
NEPRO-215ENST00000474311 GPHNQ9NQX3 736 aaPredicted RBP10.76□□□□□ -0.69
NEPRO-215ENST00000474311 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
NEPRO-215ENST00000474311 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
NEPRO-215ENST00000474311 ZNF592Q92610 1267 aa10.73□□□□□ -0.69
NEPRO-215ENST00000474311 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
NEPRO-215ENST00000474311 PTGDRQ13258 359 aa10.72□□□□□ -0.69
NEPRO-215ENST00000474311 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
NEPRO-215ENST00000474311 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
NEPRO-215ENST00000474311 GABBR2O75899 941 aa10.71□□□□□ -0.69
NEPRO-215ENST00000474311 ERCC3P19447 782 aa10.71□□□□□ -0.69
NEPRO-215ENST00000474311 PPP1R1BQ9UD71 204 aaPredicted RBP10.71□□□□□ -0.69
NEPRO-215ENST00000474311 ANKRD62A6NC57 917 aa10.7□□□□□ -0.7
NEPRO-215ENST00000474311 UBXN4Q92575 508 aa10.7□□□□□ -0.7
NEPRO-215ENST00000474311 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
NEPRO-215ENST00000474311 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
NEPRO-215ENST00000474311 FARP1Q9Y4F1 1045 aaPredicted RBP10.7□□□□□ -0.7
NEPRO-215ENST00000474311 DSG2Q14126 1118 aa10.69□□□□□ -0.7
NEPRO-215ENST00000474311 PPP2R2DQ66LE6 453 aa10.69□□□□□ -0.7
NEPRO-215ENST00000474311 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
NEPRO-215ENST00000474311 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
NEPRO-215ENST00000474311 LMOD1P29536 600 aaPredicted RBP10.67□□□□□ -0.7
NEPRO-215ENST00000474311 ZC3H6P61129 1189 aaKnown RBP10.67□□□□□ -0.7
NEPRO-215ENST00000474311 CC2D2BQ6DHV5 1058 aa10.67□□□□□ -0.7
NEPRO-215ENST00000474311 IFNL1Q8IU54 200 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms