RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 RSPH4AQ5TD94 716 aa28.74■■■□□ 2.19
PDE6B-208ENST00000474251 TCOF1Q13428 1488 aaKnown RBP28.73■■■□□ 2.19
PDE6B-208ENST00000474251 RNF17Q9BXT8 1623 aaKnown RBP28.72■■■□□ 2.19
PDE6B-208ENST00000474251 A2ML1A8K2U0 1454 aa28.72■■■□□ 2.19
PDE6B-208ENST00000474251 IQSEC2Q5JU85 1478 aa28.72■■■□□ 2.19
PDE6B-208ENST00000474251 PZPP20742 1482 aa28.7■■■□□ 2.18
PDE6B-208ENST00000474251 KIF3BO15066 747 aa28.69■■■□□ 2.18
PDE6B-208ENST00000474251 EIF2AK4Q9P2K8 1649 aaKnown RBP28.68■■■□□ 2.18
PDE6B-208ENST00000474251 NCKAP5LQ9HCH0 1330 aa28.68■■■□□ 2.18
PDE6B-208ENST00000474251 ZC3H13Q5T200 1668 aaKnown RBP28.67■■■□□ 2.18
PDE6B-208ENST00000474251 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
PDE6B-208ENST00000474251 MYOM3Q5VTT5 1437 aa28.64■■■□□ 2.18
PDE6B-208ENST00000474251 PKD2Q13563 968 aa28.64■■■□□ 2.18
PDE6B-208ENST00000474251 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
PDE6B-208ENST00000474251 MIA2Q96PC5 1412 aa28.62■■■□□ 2.17
PDE6B-208ENST00000474251 TNRQ92752 1358 aa28.62■■■□□ 2.17
PDE6B-208ENST00000474251 CEP152O94986 1710 aa28.61■■■□□ 2.17
PDE6B-208ENST00000474251 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
PDE6B-208ENST00000474251 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
PDE6B-208ENST00000474251 NEURL4Q96JN8 1562 aa28.61■■■□□ 2.17
PDE6B-208ENST00000474251 MROH1Q8NDA8 1641 aa28.61■■■□□ 2.17
PDE6B-208ENST00000474251 CFAP65Q6ZU64 1925 aaKnown RBP28.61■■■□□ 2.17
PDE6B-208ENST00000474251 FBXO31Q5XUX0 539 aaPredicted RBP28.58■■■□□ 2.17
PDE6B-208ENST00000474251 ZNF335Q9H4Z2 1342 aaPredicted RBP28.58■■■□□ 2.17
PDE6B-208ENST00000474251 ABCC3O15438 1527 aa28.58■■■□□ 2.17
PDE6B-208ENST00000474251 WASHC2CQ9Y4E1 1318 aa28.57■■■□□ 2.16
PDE6B-208ENST00000474251 PTPN23Q9H3S7 1636 aa28.54■■■□□ 2.16
PDE6B-208ENST00000474251 NLRP1Q9C000 1473 aa28.53■■■□□ 2.16
PDE6B-208ENST00000474251 SPATA31D1Q6ZQQ2 1576 aa28.53■■■□□ 2.16
PDE6B-208ENST00000474251 DUOX2Q9NRD8 1548 aa28.51■■■□□ 2.15
PDE6B-208ENST00000474251 UGGT1Q9NYU2 1555 aa28.5■■■□□ 2.15
PDE6B-208ENST00000474251 DEPDC5O75140 1603 aa28.5■■■□□ 2.15
PDE6B-208ENST00000474251 SHANK2Q9UPX8 1470 aa28.49■■■□□ 2.15
PDE6B-208ENST00000474251 PRDM15P57071 1507 aaPredicted RBP28.46■■■□□ 2.15
PDE6B-208ENST00000474251 ERVK-7P63135 1459 aa28.46■■■□□ 2.15
PDE6B-208ENST00000474251 IQGAP1P46940 1657 aa28.44■■■□□ 2.14
PDE6B-208ENST00000474251 UBR1Q8IWV7 1749 aa28.43■■■□□ 2.14
PDE6B-208ENST00000474251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.43■■■□□ 2.14
PDE6B-208ENST00000474251 ABCC5O15440 1437 aa28.43■■■□□ 2.14
PDE6B-208ENST00000474251 CPS1P31327 1500 aa28.41■■■□□ 2.14
PDE6B-208ENST00000474251 VWDEQ8N2E2 1590 aa28.41■■■□□ 2.14
PDE6B-208ENST00000474251 MED14O60244 1454 aa28.4■■■□□ 2.14
PDE6B-208ENST00000474251 KIF15Q9NS87 1388 aa28.39■■■□□ 2.14
PDE6B-208ENST00000474251 ERBINQ96RT1 1412 aa28.39■■■□□ 2.14
PDE6B-208ENST00000474251 DAPK1P53355 1430 aa28.38■■■□□ 2.13
PDE6B-208ENST00000474251 FGD6Q6ZV73 1430 aa28.38■■■□□ 2.13
PDE6B-208ENST00000474251 THEMISQ8N1K5 641 aaPredicted RBP28.37■■■□□ 2.13
PDE6B-208ENST00000474251 STRCP1A6NGW2 1772 aa28.37■■■□□ 2.13
PDE6B-208ENST00000474251 DISP3Q9P2K9 1392 aa28.37■■■□□ 2.13
PDE6B-208ENST00000474251 NPHP4O75161 1426 aaPredicted RBP28.35■■■□□ 2.13
PDE6B-208ENST00000474251 UBAP1LF5GYI3 381 aa28.35■■■□□ 2.13
PDE6B-208ENST00000474251 APLP2Q06481 763 aa28.35■■■□□ 2.13
PDE6B-208ENST00000474251 ANKLE2Q86XL3 938 aa28.35■■■□□ 2.13
PDE6B-208ENST00000474251 ARHGAP31Q2M1Z3 1444 aa28.31■■■□□ 2.12
PDE6B-208ENST00000474251 RRP7BPQ9NSQ0 103 aa28.27■■■□□ 2.12
PDE6B-208ENST00000474251 PIK3C2BO00750 1634 aa28.27■■■□□ 2.12
PDE6B-208ENST00000474251 SYNMO15061 1565 aa28.26■■■□□ 2.11
PDE6B-208ENST00000474251 SLIT1O75093 1534 aa28.24■■■□□ 2.11
PDE6B-208ENST00000474251 KDM5AP29375 1690 aaKnown RBP28.24■■■□□ 2.11
PDE6B-208ENST00000474251 LMTK2Q8IWU2 1503 aa28.23■■■□□ 2.11
PDE6B-208ENST00000474251 ARHGAP23Q9P227 1491 aa28.23■■■□□ 2.11
PDE6B-208ENST00000474251 ILDR2Q71H61 639 aa28.23■■■□□ 2.11
PDE6B-208ENST00000474251 ALKQ9UM73 1620 aa28.22■■■□□ 2.11
PDE6B-208ENST00000474251 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
PDE6B-208ENST00000474251 SCAF11Q99590 1463 aaKnown RBP28.21■■■□□ 2.11
PDE6B-208ENST00000474251 ANKRD30AQ9BXX3 1397 aa28.21■■■□□ 2.11
PDE6B-208ENST00000474251 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
PDE6B-208ENST00000474251 KANK1Q14678 1352 aa28.18■■■□□ 2.1
PDE6B-208ENST00000474251 EFCAB6Q5THR3 1501 aa28.18■■■□□ 2.1
PDE6B-208ENST00000474251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.16■■■□□ 2.1
PDE6B-208ENST00000474251 CHIC2Q9UKJ5 165 aa28.16■■■□□ 2.1
PDE6B-208ENST00000474251 LRRC7Q96NW7 1537 aa28.15■■■□□ 2.1
PDE6B-208ENST00000474251 TOM1O60784 492 aa28.13■■■□□ 2.09
PDE6B-208ENST00000474251 MYO5BQ9ULV0 1848 aa28.12■■■□□ 2.09
PDE6B-208ENST00000474251 SCAF1Q9H7N4 1312 aaKnown RBP28.11■■■□□ 2.09
PDE6B-208ENST00000474251 LTKP29376 864 aa28.1■■■□□ 2.09
PDE6B-208ENST00000474251 PIP4K2BP78356 416 aa28.1■■■□□ 2.09
PDE6B-208ENST00000474251 TET3O43151 1660 aa28.08■■■□□ 2.09
PDE6B-208ENST00000474251 GCC2Q8IWJ2 1684 aa28.08■■■□□ 2.09
PDE6B-208ENST00000474251 NOS1P29475 1434 aa28.08■■■□□ 2.09
PDE6B-208ENST00000474251 HSPA1LP34931 641 aa28.07■■■□□ 2.08
PDE6B-208ENST00000474251 ADGRB3O60242 1522 aa28.07■■■□□ 2.08
PDE6B-208ENST00000474251 MED1Q15648 1581 aaPredicted RBP28.07■■■□□ 2.08
PDE6B-208ENST00000474251 TMEM2Q9UHN6 1383 aa28.06■■■□□ 2.08
PDE6B-208ENST00000474251 TXNDC2Q86VQ3 553 aa28.05■■■□□ 2.08
PDE6B-208ENST00000474251 UNC13BO14795 1591 aa28.04■■■□□ 2.08
PDE6B-208ENST00000474251 ANKRD50Q9ULJ7 1429 aa28.03■■■□□ 2.08
PDE6B-208ENST00000474251 SOCS7O14512 581 aa28.03■■■□□ 2.08
PDE6B-208ENST00000474251 FAM50AQ14320 339 aaKnown RBP28.03■■■□□ 2.08
PDE6B-208ENST00000474251 RPRD2Q5VT52 1461 aaKnown RBP28.02■■■□□ 2.08
PDE6B-208ENST00000474251 EID1Q9Y6B2 187 aa28.01■■■□□ 2.07
PDE6B-208ENST00000474251 IDI1Q13907 227 aa28■■■□□ 2.07
PDE6B-208ENST00000474251 STAG3Q9UJ98 1225 aa27.98■■■□□ 2.07
PDE6B-208ENST00000474251 E9PCH4 1651 aa27.96■■■□□ 2.07
PDE6B-208ENST00000474251 IQGAP3Q86VI3 1631 aa27.93■■■□□ 2.06
PDE6B-208ENST00000474251 NWD1Q149M9 1564 aa27.93■■■□□ 2.06
PDE6B-208ENST00000474251 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
PDE6B-208ENST00000474251 CHD2O14647 1828 aaKnown RBP27.9■■■□□ 2.06
PDE6B-208ENST00000474251 SLC52A1Q9NWF4 448 aa27.89■■■□□ 2.06
PDE6B-208ENST00000474251 ROCK1Q13464 1354 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms