RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 PHF14O94880 888 aa11.06□□□□□ -0.64
GPNMB-209ENST00000474157 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
GPNMB-209ENST00000474157 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
GPNMB-209ENST00000474157 EPAS1Q99814 870 aa11.05□□□□□ -0.64
GPNMB-209ENST00000474157 LAMC3Q9Y6N6 1575 aa11.05□□□□□ -0.64
GPNMB-209ENST00000474157 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
GPNMB-209ENST00000474157 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
GPNMB-209ENST00000474157 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-209ENST00000474157 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-209ENST00000474157 TMEM132AQ24JP5 1023 aa11.04□□□□□ -0.64
GPNMB-209ENST00000474157 PCDHGA10Q9Y5H3 936 aa11.04□□□□□ -0.64
GPNMB-209ENST00000474157 GNPATO15228 680 aa11.03□□□□□ -0.64
GPNMB-209ENST00000474157 HIC1Q14526 733 aa11.03□□□□□ -0.64
GPNMB-209ENST00000474157 ACIN1Q9UKV3 1341 aaKnown RBP11.03□□□□□ -0.64
GPNMB-209ENST00000474157 MAP3K7O43318 606 aa11.02□□□□□ -0.65
GPNMB-209ENST00000474157 PTGDRQ13258 359 aa11.02□□□□□ -0.65
GPNMB-209ENST00000474157 KHSRPQ92945 711 aaKnown RBP eCLIP11.02□□□□□ -0.65
GPNMB-209ENST00000474157 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
GPNMB-209ENST00000474157 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
GPNMB-209ENST00000474157 BAZ1AQ9NRL2 1556 aaPredicted RBP11.02□□□□□ -0.65
GPNMB-209ENST00000474157 TRIM66O15016 1216 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 NUDT7P0C024 238 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 ARSIQ5FYB1 569 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
GPNMB-209ENST00000474157 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
GPNMB-209ENST00000474157 FECHP22830 423 aa11□□□□□ -0.65
GPNMB-209ENST00000474157 CYB5RLQ6IPT4 315 aa11□□□□□ -0.65
GPNMB-209ENST00000474157 CCDC102AQ96A19 550 aa11□□□□□ -0.65
GPNMB-209ENST00000474157 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
GPNMB-209ENST00000474157 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
GPNMB-209ENST00000474157 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
GPNMB-209ENST00000474157 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
GPNMB-209ENST00000474157 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
GPNMB-209ENST00000474157 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
GPNMB-209ENST00000474157 ZSWIM6Q9HCJ5 1215 aa10.98□□□□□ -0.65
GPNMB-209ENST00000474157 IRF6O14896 467 aa10.97□□□□□ -0.65
GPNMB-209ENST00000474157 FOSBP53539 338 aa10.97□□□□□ -0.65
GPNMB-209ENST00000474157 PDE4DQ08499 809 aa10.97□□□□□ -0.65
GPNMB-209ENST00000474157 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
GPNMB-209ENST00000474157 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
GPNMB-209ENST00000474157 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
GPNMB-209ENST00000474157 NPDC1Q9NQX5 325 aaPredicted RBP10.95□□□□□ -0.66
GPNMB-209ENST00000474157 CADPSQ9ULU8 1353 aa10.94□□□□□ -0.66
GPNMB-209ENST00000474157 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
GPNMB-209ENST00000474157 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
GPNMB-209ENST00000474157 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
GPNMB-209ENST00000474157 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
GPNMB-209ENST00000474157 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
GPNMB-209ENST00000474157 KDM4CQ9H3R0 1056 aa10.93□□□□□ -0.66
GPNMB-209ENST00000474157 WDR62O43379 1518 aa10.93□□□□□ -0.66
GPNMB-209ENST00000474157 ARHGEF11O15085 1522 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 SNPHO15079 494 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 C6orf132Q5T0Z8 1188 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
GPNMB-209ENST00000474157 AMHR2Q16671 573 aa10.88□□□□□ -0.67
GPNMB-209ENST00000474157 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
GPNMB-209ENST00000474157 OTUD5Q96G74 571 aa10.87□□□□□ -0.67
GPNMB-209ENST00000474157 PARP9Q8IXQ6 854 aa10.86□□□□□ -0.67
GPNMB-209ENST00000474157 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
GPNMB-209ENST00000474157 UBE2Q2Q8WVN8 375 aa10.86□□□□□ -0.67
GPNMB-209ENST00000474157 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
GPNMB-209ENST00000474157 PPP4R3BQ5MIZ7 849 aa10.85□□□□□ -0.67
GPNMB-209ENST00000474157 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
GPNMB-209ENST00000474157 PADI6Q6TGC4 694 aa10.84□□□□□ -0.67
GPNMB-209ENST00000474157 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
GPNMB-209ENST00000474157 CEP164Q9UPV0 1460 aa10.83□□□□□ -0.68
GPNMB-209ENST00000474157 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
GPNMB-209ENST00000474157 PPARGC1BQ86YN6 1023 aaKnown RBP10.83□□□□□ -0.68
GPNMB-209ENST00000474157 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
GPNMB-209ENST00000474157 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
GPNMB-209ENST00000474157 LHX8Q68G74 356 aa10.8□□□□□ -0.68
GPNMB-209ENST00000474157 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
GPNMB-209ENST00000474157 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
GPNMB-209ENST00000474157 RBM27Q9P2N5 1060 aaKnown RBP10.8□□□□□ -0.68
GPNMB-209ENST00000474157 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
GPNMB-209ENST00000474157 PRSS12P56730 875 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 GIGYF2Q6Y7W6 1299 aaKnown RBP10.78□□□□□ -0.68
GPNMB-209ENST00000474157 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 PHOX2BQ99453 314 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
GPNMB-209ENST00000474157 COL9A1P20849 921 aa10.77□□□□□ -0.69
GPNMB-209ENST00000474157 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
GPNMB-209ENST00000474157 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
GPNMB-209ENST00000474157 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
GPNMB-209ENST00000474157 ARAP1Q96P48 1450 aa10.76□□□□□ -0.69
GPNMB-209ENST00000474157 OATP04181 439 aa10.76□□□□□ -0.69
GPNMB-209ENST00000474157 PTPREP23469 700 aa10.76□□□□□ -0.69
GPNMB-209ENST00000474157 DDRGK1Q96HY6 314 aa10.76□□□□□ -0.69
GPNMB-209ENST00000474157 PPP1R3GB7ZBB8 358 aa10.75□□□□□ -0.69
GPNMB-209ENST00000474157 CLCN1P35523 988 aa10.75□□□□□ -0.69
GPNMB-209ENST00000474157 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
GPNMB-209ENST00000474157 NLRP7Q8WX94 980 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms