RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 DIP2BQ9P265 1576 aa25.66■■□□□ 1.7
VARS2-206ENST00000473916 PLA2R1Q13018 1463 aa25.66■■□□□ 1.7
VARS2-206ENST00000473916 GLI2P10070 1586 aa25.65■■□□□ 1.7
VARS2-206ENST00000473916 NEO1Q92859 1461 aa25.65■■□□□ 1.7
VARS2-206ENST00000473916 HECW2Q9P2P5 1572 aa25.62■■□□□ 1.69
VARS2-206ENST00000473916 TSPOAP1O95153 1857 aa25.62■■□□□ 1.69
VARS2-206ENST00000473916 RAPGEF3O95398 923 aa25.61■■□□□ 1.69
VARS2-206ENST00000473916 DHX29Q7Z478 1369 aaKnown RBP25.61■■□□□ 1.69
VARS2-206ENST00000473916 E9PCH4 1651 aa25.61■■□□□ 1.69
VARS2-206ENST00000473916 MROH1Q8NDA8 1641 aa25.61■■□□□ 1.69
VARS2-206ENST00000473916 EIF2AK4Q9P2K8 1649 aaKnown RBP25.61■■□□□ 1.69
VARS2-206ENST00000473916 KIF3BO15066 747 aa25.59■■□□□ 1.69
VARS2-206ENST00000473916 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
VARS2-206ENST00000473916 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
VARS2-206ENST00000473916 RICTORQ6R327 1708 aa25.59■■□□□ 1.69
VARS2-206ENST00000473916 MLH3Q9UHC1 1453 aa25.57■■□□□ 1.68
VARS2-206ENST00000473916 FRMPD1Q5SYB0 1578 aa25.57■■□□□ 1.68
VARS2-206ENST00000473916 CCDC144AA2RUR9 1427 aa25.57■■□□□ 1.68
VARS2-206ENST00000473916 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
VARS2-206ENST00000473916 PPRC1Q5VV67 1664 aaKnown RBP25.56■■□□□ 1.68
VARS2-206ENST00000473916 A2MP01023 1474 aa25.55■■□□□ 1.68
VARS2-206ENST00000473916 PRDM15P57071 1507 aaPredicted RBP25.55■■□□□ 1.68
VARS2-206ENST00000473916 HSPA5P11021 654 aaKnown RBP25.55■■□□□ 1.68
VARS2-206ENST00000473916 ZNF326Q5BKZ1 582 aaKnown RBP25.55■■□□□ 1.68
VARS2-206ENST00000473916 TET3O43151 1660 aa25.54■■□□□ 1.68
VARS2-206ENST00000473916 DDX10Q13206 875 aaKnown RBP25.53■■□□□ 1.68
VARS2-206ENST00000473916 ATP10AO60312 1499 aa25.5■■□□□ 1.67
VARS2-206ENST00000473916 KIF13AQ9H1H9 1805 aa25.49■■□□□ 1.67
VARS2-206ENST00000473916 CEP152O94986 1710 aa25.49■■□□□ 1.67
VARS2-206ENST00000473916 SPHKAPQ2M3C7 1700 aa25.49■■□□□ 1.67
VARS2-206ENST00000473916 KDM2AQ9Y2K7 1162 aa25.49■■□□□ 1.67
VARS2-206ENST00000473916 RNF17Q9BXT8 1623 aaKnown RBP25.49■■□□□ 1.67
VARS2-206ENST00000473916 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
VARS2-206ENST00000473916 EIF4G2P78344 907 aaKnown RBP eCLIP25.47■■□□□ 1.67
VARS2-206ENST00000473916 DCAF11Q8TEB1 546 aa25.47■■□□□ 1.67
VARS2-206ENST00000473916 KANK1Q14678 1352 aa25.47■■□□□ 1.67
VARS2-206ENST00000473916 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
VARS2-206ENST00000473916 RGL3Q3MIN7 710 aa25.46■■□□□ 1.67
VARS2-206ENST00000473916 YEATS2Q9ULM3 1422 aa25.44■■□□□ 1.66
VARS2-206ENST00000473916 TRPM2O94759 1503 aa25.43■■□□□ 1.66
VARS2-206ENST00000473916 CLTCL1P53675 1640 aa25.42■■□□□ 1.66
VARS2-206ENST00000473916 BCORL1Q5H9F3 1711 aa25.41■■□□□ 1.66
VARS2-206ENST00000473916 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
VARS2-206ENST00000473916 EFCAB6Q5THR3 1501 aa25.41■■□□□ 1.66
VARS2-206ENST00000473916 PTPRTO14522 1441 aa25.4■■□□□ 1.66
VARS2-206ENST00000473916 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
VARS2-206ENST00000473916 GGT6Q6P531 493 aa25.38■■□□□ 1.65
VARS2-206ENST00000473916 WASHC2AQ641Q2 1341 aa25.38■■□□□ 1.65
VARS2-206ENST00000473916 CFAP65Q6ZU64 1925 aaKnown RBP25.37■■□□□ 1.65
VARS2-206ENST00000473916 C11orf95C9JLR9 678 aaPredicted RBP25.37■■□□□ 1.65
VARS2-206ENST00000473916 UGGT1Q9NYU2 1555 aa25.37■■□□□ 1.65
VARS2-206ENST00000473916 LMTK2Q8IWU2 1503 aa25.35■■□□□ 1.65
VARS2-206ENST00000473916 PRAG1Q86YV5 1406 aa25.35■■□□□ 1.65
VARS2-206ENST00000473916 TRPM1Q7Z4N2 1603 aa25.35■■□□□ 1.65
VARS2-206ENST00000473916 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
VARS2-206ENST00000473916 USP47Q96K76 1375 aa25.34■■□□□ 1.65
VARS2-206ENST00000473916 YTHDC1Q96MU7 727 aaKnown RBP25.34■■□□□ 1.65
VARS2-206ENST00000473916 ABCC3O15438 1527 aa25.31■■□□□ 1.64
VARS2-206ENST00000473916 POLR1AO95602 1720 aaPredicted RBP25.3■■□□□ 1.64
VARS2-206ENST00000473916 CARD11Q9BXL7 1154 aa25.28■■□□□ 1.64
VARS2-206ENST00000473916 NPATQ14207 1427 aa25.28■■□□□ 1.64
VARS2-206ENST00000473916 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
VARS2-206ENST00000473916 CAMSAP1Q5T5Y3 1602 aa25.27■■□□□ 1.64
VARS2-206ENST00000473916 CCDC7Q96M83 1385 aa25.27■■□□□ 1.64
VARS2-206ENST00000473916 ROCK2O75116 1388 aaKnown RBP25.26■■□□□ 1.63
VARS2-206ENST00000473916 WASHC2CQ9Y4E1 1318 aa25.25■■□□□ 1.63
VARS2-206ENST00000473916 SIGLEC1Q9BZZ2 1709 aa25.25■■□□□ 1.63
VARS2-206ENST00000473916 NBPF1Q3BBV0 1214 aa25.25■■□□□ 1.63
VARS2-206ENST00000473916 MROH2AA6NES4 1674 aa25.25■■□□□ 1.63
VARS2-206ENST00000473916 KIF1BO60333 1816 aa25.24■■□□□ 1.63
VARS2-206ENST00000473916 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
VARS2-206ENST00000473916 MADDQ8WXG6 1647 aa25.22■■□□□ 1.63
VARS2-206ENST00000473916 ZC3H13Q5T200 1668 aaKnown RBP25.18■■□□□ 1.62
VARS2-206ENST00000473916 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
VARS2-206ENST00000473916 GPRASP1Q5JY77 1395 aa25.16■■□□□ 1.62
VARS2-206ENST00000473916 CNTLNQ9NXG0 1405 aa25.15■■□□□ 1.62
VARS2-206ENST00000473916 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
VARS2-206ENST00000473916 LAMC1P11047 1609 aa25.15■■□□□ 1.62
VARS2-206ENST00000473916 IFT172Q9UG01 1749 aa25.14■■□□□ 1.62
VARS2-206ENST00000473916 SYNMO15061 1565 aa25.13■■□□□ 1.61
VARS2-206ENST00000473916 ANP32CO43423 234 aa25.13■■□□□ 1.61
VARS2-206ENST00000473916 REREQ9P2R6 1566 aa25.12■■□□□ 1.61
VARS2-206ENST00000473916 ADGRB3O60242 1522 aa25.12■■□□□ 1.61
VARS2-206ENST00000473916 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
VARS2-206ENST00000473916 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
VARS2-206ENST00000473916 NOS1P29475 1434 aa25.1■■□□□ 1.61
VARS2-206ENST00000473916 CHGAP10645 457 aaKnown RBP25.08■■□□□ 1.61
VARS2-206ENST00000473916 PIK3C2BO00750 1634 aa25.08■■□□□ 1.61
VARS2-206ENST00000473916 CENPBP07199 599 aaPredicted RBP25.07■■□□□ 1.6
VARS2-206ENST00000473916 ARHGAP31Q2M1Z3 1444 aa25.07■■□□□ 1.6
VARS2-206ENST00000473916 AGLP35573 1532 aa25.07■■□□□ 1.6
VARS2-206ENST00000473916 PREX1Q8TCU6 1659 aa25.06■■□□□ 1.6
VARS2-206ENST00000473916 ADGRF5Q8IZF2 1346 aa25.05■■□□□ 1.6
VARS2-206ENST00000473916 PPLO60437 1756 aa25.05■■□□□ 1.6
VARS2-206ENST00000473916 MYOM2P54296 1465 aa25.05■■□□□ 1.6
VARS2-206ENST00000473916 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
VARS2-206ENST00000473916 CLTCQ00610 1675 aaKnown RBP25.04■■□□□ 1.6
VARS2-206ENST00000473916 MLECQ14165 292 aa25.02■■□□□ 1.6
VARS2-206ENST00000473916 MYO5BQ9ULV0 1848 aa25.01■■□□□ 1.59
VARS2-206ENST00000473916 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms