RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 RGS3P49796 1198 aa17.46■□□□□ 0.39
NOTCH4-203ENST00000473562 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
NOTCH4-203ENST00000473562 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.39
NOTCH4-203ENST00000473562 RALBP1Q15311 655 aa17.46■□□□□ 0.39
NOTCH4-203ENST00000473562 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.38
NOTCH4-203ENST00000473562 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
NOTCH4-203ENST00000473562 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
NOTCH4-203ENST00000473562 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
NOTCH4-203ENST00000473562 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
NOTCH4-203ENST00000473562 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
NOTCH4-203ENST00000473562 BRPF3Q9ULD4 1205 aa17.44■□□□□ 0.38
NOTCH4-203ENST00000473562 TROQ12816 1431 aaPredicted RBP17.44■□□□□ 0.38
NOTCH4-203ENST00000473562 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
NOTCH4-203ENST00000473562 POLR1AO95602 1720 aaPredicted RBP17.43■□□□□ 0.38
NOTCH4-203ENST00000473562 CCDC146Q8IYE0 955 aa17.43■□□□□ 0.38
NOTCH4-203ENST00000473562 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
NOTCH4-203ENST00000473562 PER1O15534 1290 aaPredicted RBP17.41■□□□□ 0.38
NOTCH4-203ENST00000473562 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
NOTCH4-203ENST00000473562 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
NOTCH4-203ENST00000473562 RAPGEF6Q8TEU7 1601 aa17.4■□□□□ 0.38
NOTCH4-203ENST00000473562 JPH4Q96JJ6 628 aa17.4■□□□□ 0.38
NOTCH4-203ENST00000473562 C9orf84Q5VXU9 1444 aa17.4■□□□□ 0.38
NOTCH4-203ENST00000473562 RALGAPBQ86X10 1494 aa17.39■□□□□ 0.37
NOTCH4-203ENST00000473562 PRKCSHP14314 528 aaPredicted RBP17.37■□□□□ 0.37
NOTCH4-203ENST00000473562 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
NOTCH4-203ENST00000473562 ARID4BQ4LE39 1312 aaPredicted RBP17.36■□□□□ 0.37
NOTCH4-203ENST00000473562 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
NOTCH4-203ENST00000473562 DAXXQ9UER7 740 aaPredicted RBP17.34■□□□□ 0.37
NOTCH4-203ENST00000473562 TESK2Q96S53 571 aa17.33■□□□□ 0.37
NOTCH4-203ENST00000473562 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
NOTCH4-203ENST00000473562 ARXQ96QS3 562 aa17.33■□□□□ 0.36
NOTCH4-203ENST00000473562 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
NOTCH4-203ENST00000473562 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
NOTCH4-203ENST00000473562 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
NOTCH4-203ENST00000473562 CCDC144AA2RUR9 1427 aa17.31■□□□□ 0.36
NOTCH4-203ENST00000473562 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
NOTCH4-203ENST00000473562 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
NOTCH4-203ENST00000473562 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
NOTCH4-203ENST00000473562 BCAR3O75815 825 aa17.3■□□□□ 0.36
NOTCH4-203ENST00000473562 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
NOTCH4-203ENST00000473562 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
NOTCH4-203ENST00000473562 FRAT2O75474 233 aaPredicted RBP17.29■□□□□ 0.36
NOTCH4-203ENST00000473562 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
NOTCH4-203ENST00000473562 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
NOTCH4-203ENST00000473562 MS4A1P11836 297 aa17.27■□□□□ 0.36
NOTCH4-203ENST00000473562 DMRT2Q9Y5R5 561 aa17.27■□□□□ 0.36
NOTCH4-203ENST00000473562 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.35
NOTCH4-203ENST00000473562 PRAG1Q86YV5 1406 aa17.26■□□□□ 0.35
NOTCH4-203ENST00000473562 TMF1P82094 1093 aa17.26■□□□□ 0.35
NOTCH4-203ENST00000473562 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
NOTCH4-203ENST00000473562 DUSP27Q5VZP5 1158 aa17.26■□□□□ 0.35
NOTCH4-203ENST00000473562 ADGBQ8N7X0 1667 aa17.25■□□□□ 0.35
NOTCH4-203ENST00000473562 PPM1GO15355 546 aaPredicted RBP17.25■□□□□ 0.35
NOTCH4-203ENST00000473562 APAF1O14727 1248 aa17.25■□□□□ 0.35
NOTCH4-203ENST00000473562 PPP2R1AP30153 589 aa17.25■□□□□ 0.35
NOTCH4-203ENST00000473562 GSE1Q14687 1217 aa17.24■□□□□ 0.35
NOTCH4-203ENST00000473562 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
NOTCH4-203ENST00000473562 ATP10BO94823 1461 aa17.23■□□□□ 0.35
NOTCH4-203ENST00000473562 EIF5BO60841 1220 aaKnown RBP17.23■□□□□ 0.35
NOTCH4-203ENST00000473562 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
NOTCH4-203ENST00000473562 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
NOTCH4-203ENST00000473562 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 GOLGA2Q08379 1002 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 A2MP01023 1474 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 ITSN2Q9NZM3 1697 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 SEC24BO95487 1268 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 SPRYD3Q8NCJ5 442 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
NOTCH4-203ENST00000473562 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
NOTCH4-203ENST00000473562 PLA2R1Q13018 1463 aa17.2■□□□□ 0.34
NOTCH4-203ENST00000473562 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
NOTCH4-203ENST00000473562 CDC42BPAQ5VT25 1732 aa17.2■□□□□ 0.34
NOTCH4-203ENST00000473562 IGHDP01880 384 aa17.2■□□□□ 0.34
NOTCH4-203ENST00000473562 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
NOTCH4-203ENST00000473562 CROCC2H7BZ55 1655 aa17.19■□□□□ 0.34
NOTCH4-203ENST00000473562 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
NOTCH4-203ENST00000473562 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
NOTCH4-203ENST00000473562 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 TNNQ9UQP3 1299 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
NOTCH4-203ENST00000473562 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
NOTCH4-203ENST00000473562 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
NOTCH4-203ENST00000473562 MAGI2Q86UL8 1455 aa17.16■□□□□ 0.34
NOTCH4-203ENST00000473562 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
NOTCH4-203ENST00000473562 E9PCH4 1651 aa17.16■□□□□ 0.34
NOTCH4-203ENST00000473562 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
NOTCH4-203ENST00000473562 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
NOTCH4-203ENST00000473562 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
NOTCH4-203ENST00000473562 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
NOTCH4-203ENST00000473562 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
NOTCH4-203ENST00000473562 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.34
NOTCH4-203ENST00000473562 TRPM1Q7Z4N2 1603 aa17.13■□□□□ 0.33
NOTCH4-203ENST00000473562 SLFN5Q08AF3 891 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms