RNA–Protein interactions for RNA: ENST00000473375.1

FXR1-210, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-210ENST00000473375 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
FXR1-210ENST00000473375 C6orf132Q5T0Z8 1188 aa8.27□□□□□ -1.09
FXR1-210ENST00000473375 KCNK17Q96T54 332 aa8.27□□□□□ -1.09
FXR1-210ENST00000473375 TULP1O00294 542 aaPredicted RBP8.26□□□□□ -1.09
FXR1-210ENST00000473375 MAP3K7O43318 606 aa8.26□□□□□ -1.09
FXR1-210ENST00000473375 PRIM1P49642 420 aaKnown RBP8.26□□□□□ -1.09
FXR1-210ENST00000473375 RBM33Q96EV2 1170 aaKnown RBP8.26□□□□□ -1.09
FXR1-210ENST00000473375 PPP1R3GB7ZBB8 358 aa8.25□□□□□ -1.09
FXR1-210ENST00000473375 PSEN2P49810 448 aa8.25□□□□□ -1.09
FXR1-210ENST00000473375 LSM11P83369 360 aaKnown RBP eCLIP8.25□□□□□ -1.09
FXR1-210ENST00000473375 SLC4A5Q9BY07 1137 aa8.25□□□□□ -1.09
FXR1-210ENST00000473375 AXIN2Q9Y2T1 843 aa8.25□□□□□ -1.09
FXR1-210ENST00000473375 CERKQ8TCT0 537 aa8.24□□□□□ -1.09
FXR1-210ENST00000473375 TK2O00142 265 aa8.23□□□□□ -1.09
FXR1-210ENST00000473375 TSR1Q2NL82 804 aaKnown RBP8.23□□□□□ -1.09
FXR1-210ENST00000473375 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
FXR1-210ENST00000473375 COL9A1P20849 921 aa8.21□□□□□ -1.1
FXR1-210ENST00000473375 BCANQ96GW7 911 aa8.21□□□□□ -1.1
FXR1-210ENST00000473375 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
FXR1-210ENST00000473375 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
FXR1-210ENST00000473375 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
FXR1-210ENST00000473375 CDHR5Q9HBB8 845 aa8.19□□□□□ -1.1
FXR1-210ENST00000473375 RBM26Q5T8P6 1007 aaKnown RBP8.18□□□□□ -1.1
FXR1-210ENST00000473375 ADGRD1Q6QNK2 874 aa8.18□□□□□ -1.1
FXR1-210ENST00000473375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
FXR1-210ENST00000473375 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
FXR1-210ENST00000473375 RBM27Q9P2N5 1060 aaKnown RBP8.18□□□□□ -1.1
FXR1-210ENST00000473375 VPS9D1Q9Y2B5 631 aa8.18□□□□□ -1.1
FXR1-210ENST00000473375 NUTM2FA1L443 756 aa8.17□□□□□ -1.1
FXR1-210ENST00000473375 FCHSD2O94868 740 aa8.17□□□□□ -1.1
FXR1-210ENST00000473375 PTGDRQ13258 359 aa8.17□□□□□ -1.1
FXR1-210ENST00000473375 PRSS12P56730 875 aa8.16□□□□□ -1.1
FXR1-210ENST00000473375 TRIM6-TRIM34B2RNG4 842 aa8.15□□□□□ -1.1
FXR1-210ENST00000473375 HRO43593 1189 aa8.15□□□□□ -1.1
FXR1-210ENST00000473375 RABGEF1Q9UJ41 708 aa8.15□□□□□ -1.1
FXR1-210ENST00000473375 PROX2Q3B8N5 592 aa8.14□□□□□ -1.11
FXR1-210ENST00000473375 GPIHBP1Q8IV16 184 aa8.14□□□□□ -1.11
FXR1-210ENST00000473375 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
FXR1-210ENST00000473375 CDCA7LQ96GN5 454 aa8.14□□□□□ -1.11
FXR1-210ENST00000473375 BHMG1C9JSJ3 638 aaPredicted RBP8.13□□□□□ -1.11
FXR1-210ENST00000473375 HIC1Q14526 733 aa8.13□□□□□ -1.11
FXR1-210ENST00000473375 LMOD2Q6P5Q4 547 aa8.13□□□□□ -1.11
FXR1-210ENST00000473375 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
FXR1-210ENST00000473375 GPR37O15354 613 aa8.12□□□□□ -1.11
FXR1-210ENST00000473375 PACS2Q86VP3 889 aa8.12□□□□□ -1.11
FXR1-210ENST00000473375 TSKSQ9UJT2 592 aa8.12□□□□□ -1.11
FXR1-210ENST00000473375 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
FXR1-210ENST00000473375 KIAA1468Q9P260 1216 aa8.11□□□□□ -1.11
FXR1-210ENST00000473375 GNPATO15228 680 aa8.1□□□□□ -1.11
FXR1-210ENST00000473375 PADI6Q6TGC4 694 aa8.1□□□□□ -1.11
FXR1-210ENST00000473375 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
FXR1-210ENST00000473375 LAPTM4BQ86VI4 370 aa8.09□□□□□ -1.11
FXR1-210ENST00000473375 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
FXR1-210ENST00000473375 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
FXR1-210ENST00000473375 MRPL50Q8N5N7 158 aaKnown RBP8.08□□□□□ -1.12
FXR1-210ENST00000473375 MYT1LQ9UL68 1186 aa8.07□□□□□ -1.12
FXR1-210ENST00000473375 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
FXR1-210ENST00000473375 TATDN2Q93075 761 aa8.06□□□□□ -1.12
FXR1-210ENST00000473375 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
FXR1-210ENST00000473375 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
FXR1-210ENST00000473375 ZC3H15Q8WU90 426 aaKnown RBP8.04□□□□□ -1.12
FXR1-210ENST00000473375 ADGRG1Q9Y653 693 aa8.04□□□□□ -1.12
FXR1-210ENST00000473375 GOLGA8CPA6NN73 597 aa8.03□□□□□ -1.12
FXR1-210ENST00000473375 NUDT18Q6ZVK8 323 aa8.03□□□□□ -1.12
FXR1-210ENST00000473375 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
FXR1-210ENST00000473375 EYA1Q99502 592 aa8.03□□□□□ -1.12
FXR1-210ENST00000473375 C3orf80F5H4A9 247 aa8.02□□□□□ -1.13
FXR1-210ENST00000473375 ZMYND10O75800 440 aa8.02□□□□□ -1.13
FXR1-210ENST00000473375 OATP04181 439 aa8.02□□□□□ -1.13
FXR1-210ENST00000473375 FECHP22830 423 aa8.02□□□□□ -1.13
FXR1-210ENST00000473375 MAP2K5Q13163 448 aa8.02□□□□□ -1.13
FXR1-210ENST00000473375 RBM46Q8TBY0 533 aaKnown RBP8.02□□□□□ -1.13
FXR1-210ENST00000473375 SEPT9Q9UHD8 586 aaPredicted RBP8.02□□□□□ -1.13
FXR1-210ENST00000473375 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
FXR1-210ENST00000473375 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
FXR1-210ENST00000473375 ZFRQ96KR1 1074 aaKnown RBP8.01□□□□□ -1.13
FXR1-210ENST00000473375 SMAPO00193 183 aa8□□□□□ -1.13
FXR1-210ENST00000473375 ANKK1Q8NFD2 765 aa7.99□□□□□ -1.13
FXR1-210ENST00000473375 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
FXR1-210ENST00000473375 WNT2BQ93097 391 aa7.99□□□□□ -1.13
FXR1-210ENST00000473375 IRF6O14896 467 aa7.98□□□□□ -1.13
FXR1-210ENST00000473375 DNAJB2P25686 324 aa7.98□□□□□ -1.13
FXR1-210ENST00000473375 METTL3Q86U44 580 aaKnown RBP7.98□□□□□ -1.13
FXR1-210ENST00000473375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
FXR1-210ENST00000473375 SOWAHBA6NEL2 793 aa7.97□□□□□ -1.13
FXR1-210ENST00000473375 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
FXR1-210ENST00000473375 KCTD12Q96CX2 325 aaKnown RBP7.97□□□□□ -1.13
FXR1-210ENST00000473375 RCCD1A6NED2 376 aa7.96□□□□□ -1.14
FXR1-210ENST00000473375 HDGFP51858 240 aaKnown RBP7.96□□□□□ -1.14
FXR1-210ENST00000473375 THSD4Q6ZMP0 1018 aa7.96□□□□□ -1.14
FXR1-210ENST00000473375 LRCH3Q96II8 777 aa7.96□□□□□ -1.14
FXR1-210ENST00000473375 SAMD7Q7Z3H4 446 aa7.95□□□□□ -1.14
FXR1-210ENST00000473375 KRI1Q8N9T8 703 aaKnown RBP7.95□□□□□ -1.14
FXR1-210ENST00000473375 TMEM134Q9H6X4 195 aa7.95□□□□□ -1.14
FXR1-210ENST00000473375 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.95□□□□□ -1.14
FXR1-210ENST00000473375 CCDC102AQ96A19 550 aa7.94□□□□□ -1.14
FXR1-210ENST00000473375 HCSTQ9UBK5 93 aa7.94□□□□□ -1.14
FXR1-210ENST00000473375 SLC4A3P48751 1232 aa7.93□□□□□ -1.14
FXR1-210ENST00000473375 SWT1Q5T5J6 900 aaKnown RBP7.92□□□□□ -1.14
FXR1-210ENST00000473375 SLF2Q8IX21 1173 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms