RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
CLCC1-208ENST00000473062 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
CLCC1-208ENST00000473062 PTPREP23469 700 aa7.47□□□□□ -1.21
CLCC1-208ENST00000473062 RBM33Q96EV2 1170 aaKnown RBP7.47□□□□□ -1.21
CLCC1-208ENST00000473062 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
CLCC1-208ENST00000473062 RBM27Q9P2N5 1060 aaKnown RBP7.47□□□□□ -1.21
CLCC1-208ENST00000473062 ERBB3P21860 1342 aa7.47□□□□□ -1.21
CLCC1-208ENST00000473062 MINK1Q8N4C8 1332 aaPredicted RBP7.47□□□□□ -1.21
CLCC1-208ENST00000473062 EMP3P54852 163 aa7.46□□□□□ -1.22
CLCC1-208ENST00000473062 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
CLCC1-208ENST00000473062 PTGDRQ13258 359 aa7.46□□□□□ -1.22
CLCC1-208ENST00000473062 AK7Q96M32 723 aa7.46□□□□□ -1.22
CLCC1-208ENST00000473062 PBX2P40425 430 aa7.45□□□□□ -1.22
CLCC1-208ENST00000473062 KHSRPQ92945 711 aaKnown RBP eCLIP7.45□□□□□ -1.226e-8■□□□□ 10.2
CLCC1-208ENST00000473062 FAM163AQ96GL9 167 aaPredicted RBP7.45□□□□□ -1.22
CLCC1-208ENST00000473062 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
CLCC1-208ENST00000473062 PPP1R3GB7ZBB8 358 aa7.43□□□□□ -1.22
CLCC1-208ENST00000473062 ST18O60284 1047 aa7.42□□□□□ -1.22
CLCC1-208ENST00000473062 ADAM33Q9BZ11 813 aa7.42□□□□□ -1.22
CLCC1-208ENST00000473062 GPR37O15354 613 aa7.41□□□□□ -1.22
CLCC1-208ENST00000473062 OATP04181 439 aa7.4□□□□□ -1.22
CLCC1-208ENST00000473062 TSR1Q2NL82 804 aaKnown RBP7.4□□□□□ -1.22
CLCC1-208ENST00000473062 IRF6O14896 467 aa7.39□□□□□ -1.23
CLCC1-208ENST00000473062 ONECUT3O60422 494 aaPredicted RBP7.39□□□□□ -1.23
CLCC1-208ENST00000473062 PRSS12P56730 875 aa7.39□□□□□ -1.23
CLCC1-208ENST00000473062 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
CLCC1-208ENST00000473062 PACS2Q86VP3 889 aa7.39□□□□□ -1.23
CLCC1-208ENST00000473062 SLC24A3Q9HC58 644 aa7.39□□□□□ -1.23
CLCC1-208ENST00000473062 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
CLCC1-208ENST00000473062 ARHGAP33O14559 1287 aa7.38□□□□□ -1.23
CLCC1-208ENST00000473062 KCNK17Q96T54 332 aa7.38□□□□□ -1.23
CLCC1-208ENST00000473062 CDHR5Q9HBB8 845 aa7.38□□□□□ -1.23
CLCC1-208ENST00000473062 PRIM1P49642 420 aaKnown RBP7.37□□□□□ -1.23
CLCC1-208ENST00000473062 RBM46Q8TBY0 533 aaKnown RBP7.37□□□□□ -1.23
CLCC1-208ENST00000473062 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
CLCC1-208ENST00000473062 SLC4A3P48751 1232 aa7.36□□□□□ -1.23
CLCC1-208ENST00000473062 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
CLCC1-208ENST00000473062 CCDC102AQ96A19 550 aa7.36□□□□□ -1.23
CLCC1-208ENST00000473062 CDCA7LQ96GN5 454 aa7.36□□□□□ -1.23
CLCC1-208ENST00000473062 SLC4A5Q9BY07 1137 aa7.36□□□□□ -1.23
CLCC1-208ENST00000473062 FAM205CA6NFA0 338 aa7.35□□□□□ -1.23
CLCC1-208ENST00000473062 TRIM6-TRIM34B2RNG4 842 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 CLCN1P35523 988 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 AMHR2Q16671 573 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 PADI6Q6TGC4 694 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 MARVELD3Q96A59 401 aa7.34□□□□□ -1.23
CLCC1-208ENST00000473062 TRIM66O15016 1216 aa7.33□□□□□ -1.24
CLCC1-208ENST00000473062 TTLL12Q14166 644 aaPredicted RBP7.33□□□□□ -1.24
CLCC1-208ENST00000473062 NBPF3Q9H094 633 aa7.33□□□□□ -1.24
CLCC1-208ENST00000473062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.32□□□□□ -1.24
CLCC1-208ENST00000473062 HDGFP51858 240 aaKnown RBP7.32□□□□□ -1.24
CLCC1-208ENST00000473062 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
CLCC1-208ENST00000473062 HS3ST6Q96QI5 342 aa7.32□□□□□ -1.24
CLCC1-208ENST00000473062 TK2O00142 265 aa7.31□□□□□ -1.24
CLCC1-208ENST00000473062 COL9A1P20849 921 aa7.31□□□□□ -1.24
CLCC1-208ENST00000473062 PDE4DQ08499 809 aa7.31□□□□□ -1.24
CLCC1-208ENST00000473062 ADGRG1Q9Y653 693 aa7.31□□□□□ -1.24
CLCC1-208ENST00000473062 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
CLCC1-208ENST00000473062 METTL3Q86U44 580 aaKnown RBP7.3□□□□□ -1.24
CLCC1-208ENST00000473062 NECTIN2Q92692 538 aa7.3□□□□□ -1.24
CLCC1-208ENST00000473062 STAC3Q96MF2 364 aa7.3□□□□□ -1.24
CLCC1-208ENST00000473062 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
CLCC1-208ENST00000473062 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
CLCC1-208ENST00000473062 FECHP22830 423 aa7.29□□□□□ -1.24
CLCC1-208ENST00000473062 DNAJB2P25686 324 aa7.29□□□□□ -1.24
CLCC1-208ENST00000473062 BRPF1P55201 1214 aaPredicted RBP7.29□□□□□ -1.24
CLCC1-208ENST00000473062 PXYLP1Q8TE99 480 aa7.29□□□□□ -1.24
CLCC1-208ENST00000473062 DDRGK1Q96HY6 314 aa7.29□□□□□ -1.24
CLCC1-208ENST00000473062 GPCPD1Q9NPB8 672 aa7.29□□□□□ -1.24
CLCC1-208ENST00000473062 LAPTM4BQ86VI4 370 aa7.28□□□□□ -1.24
CLCC1-208ENST00000473062 SULF1Q8IWU6 871 aa7.28□□□□□ -1.24
CLCC1-208ENST00000473062 PSEN2P49810 448 aa7.27□□□□□ -1.25
CLCC1-208ENST00000473062 TATDN2Q93075 761 aa7.27□□□□□ -1.25
CLCC1-208ENST00000473062 PNMA3Q9UL41 463 aa7.27□□□□□ -1.25
CLCC1-208ENST00000473062 LSM11P83369 360 aaKnown RBP eCLIP7.26□□□□□ -1.25
CLCC1-208ENST00000473062 TMEM132AQ24JP5 1023 aa7.26□□□□□ -1.25
CLCC1-208ENST00000473062 NUDT18Q6ZVK8 323 aa7.26□□□□□ -1.25
CLCC1-208ENST00000473062 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
CLCC1-208ENST00000473062 TSKSQ9UJT2 592 aa7.26□□□□□ -1.25
CLCC1-208ENST00000473062 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
CLCC1-208ENST00000473062 KDM4CQ9H3R0 1056 aa7.25□□□□□ -1.25
CLCC1-208ENST00000473062 VPS9D1Q9Y2B5 631 aa7.25□□□□□ -1.25
CLCC1-208ENST00000473062 DIXDC1Q155Q3 683 aa7.24□□□□□ -1.25
CLCC1-208ENST00000473062 PROX2Q3B8N5 592 aa7.24□□□□□ -1.25
CLCC1-208ENST00000473062 PARP9Q8IXQ6 854 aa7.24□□□□□ -1.25
CLCC1-208ENST00000473062 MRPL50Q8N5N7 158 aaKnown RBP7.24□□□□□ -1.25
CLCC1-208ENST00000473062 EYA1Q99502 592 aa7.24□□□□□ -1.25
CLCC1-208ENST00000473062 RCCD1A6NED2 376 aa7.23□□□□□ -1.25
CLCC1-208ENST00000473062 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
CLCC1-208ENST00000473062 MDM2Q00987 491 aaPredicted RBP7.23□□□□□ -1.25
CLCC1-208ENST00000473062 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
CLCC1-208ENST00000473062 AXIN2Q9Y2T1 843 aa7.23□□□□□ -1.25
CLCC1-208ENST00000473062 ADGRD1Q6QNK2 874 aa7.22□□□□□ -1.25
CLCC1-208ENST00000473062 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
CLCC1-208ENST00000473062 TMEM134Q9H6X4 195 aa7.22□□□□□ -1.25
CLCC1-208ENST00000473062 DMRTA1Q5VZB9 504 aa7.21□□□□□ -1.26
CLCC1-208ENST00000473062 RSPH6AQ9H0K4 717 aa7.21□□□□□ -1.26
CLCC1-208ENST00000473062 FAM198AQ9UFP1 575 aa7.2□□□□□ -1.26
CLCC1-208ENST00000473062 FAM161AQ3B820 660 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms