RNA–Protein interactions for RNA: ENST00000472911.1

SMTN-215, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-215ENST00000472911 TSPY4P0CV99 314 aa18.62■□□□□ 0.57
SMTN-215ENST00000472911 TSPY10P0CW01 314 aa18.62■□□□□ 0.57
SMTN-215ENST00000472911 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
SMTN-215ENST00000472911 UBAP1LF5GYI3 381 aa18.57■□□□□ 0.56
SMTN-215ENST00000472911 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
SMTN-215ENST00000472911 CAMSAP1Q5T5Y3 1602 aa18.56■□□□□ 0.56
SMTN-215ENST00000472911 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
SMTN-215ENST00000472911 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
SMTN-215ENST00000472911 ESF1Q9H501 851 aaKnown RBP18.55■□□□□ 0.56
SMTN-215ENST00000472911 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMTN-215ENST00000472911 PTPRKQ15262 1439 aa18.53■□□□□ 0.56
SMTN-215ENST00000472911 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
SMTN-215ENST00000472911 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.56
SMTN-215ENST00000472911 ADGRL2O95490 1459 aa18.52■□□□□ 0.56
SMTN-215ENST00000472911 NCKAP5LQ9HCH0 1330 aa18.52■□□□□ 0.56
SMTN-215ENST00000472911 CHIC2Q9UKJ5 165 aa18.52■□□□□ 0.56
SMTN-215ENST00000472911 CNTLNQ9NXG0 1405 aa18.51■□□□□ 0.55
SMTN-215ENST00000472911 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
SMTN-215ENST00000472911 NPATQ14207 1427 aa18.49■□□□□ 0.55
SMTN-215ENST00000472911 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
SMTN-215ENST00000472911 ANKRD30AQ9BXX3 1397 aa18.49■□□□□ 0.55
SMTN-215ENST00000472911 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
SMTN-215ENST00000472911 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
SMTN-215ENST00000472911 MROH2AA6NES4 1674 aa18.47■□□□□ 0.55
SMTN-215ENST00000472911 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
SMTN-215ENST00000472911 KIF3BO15066 747 aa18.47■□□□□ 0.55
SMTN-215ENST00000472911 MROH1Q8NDA8 1641 aa18.46■□□□□ 0.55
SMTN-215ENST00000472911 GGT6Q6P531 493 aa18.46■□□□□ 0.55
SMTN-215ENST00000472911 ERBINQ96RT1 1412 aa18.46■□□□□ 0.55
SMTN-215ENST00000472911 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
SMTN-215ENST00000472911 ITGAEP38570 1179 aa18.44■□□□□ 0.54
SMTN-215ENST00000472911 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
SMTN-215ENST00000472911 DEPDC5O75140 1603 aa18.43■□□□□ 0.54
SMTN-215ENST00000472911 HSPA1LP34931 641 aa18.43■□□□□ 0.54
SMTN-215ENST00000472911 PKD2Q13563 968 aa18.43■□□□□ 0.54
SMTN-215ENST00000472911 ZNF142P52746 1687 aaPredicted RBP18.43■□□□□ 0.54
SMTN-215ENST00000472911 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
SMTN-215ENST00000472911 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
SMTN-215ENST00000472911 CEP152O94986 1710 aa18.41■□□□□ 0.54
SMTN-215ENST00000472911 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
SMTN-215ENST00000472911 FAM135AQ9P2D6 1515 aa18.41■□□□□ 0.54
SMTN-215ENST00000472911 PRDM15P57071 1507 aaPredicted RBP18.4■□□□□ 0.54
SMTN-215ENST00000472911 ZC3H13Q5T200 1668 aaKnown RBP18.4■□□□□ 0.54
SMTN-215ENST00000472911 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
SMTN-215ENST00000472911 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
SMTN-215ENST00000472911 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
SMTN-215ENST00000472911 ANKRD50Q9ULJ7 1429 aa18.38■□□□□ 0.53
SMTN-215ENST00000472911 PIP4K2BP78356 416 aa18.37■□□□□ 0.53
SMTN-215ENST00000472911 ABCC3O15438 1527 aa18.37■□□□□ 0.53
SMTN-215ENST00000472911 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
SMTN-215ENST00000472911 UNC13BO14795 1591 aa18.34■□□□□ 0.53
SMTN-215ENST00000472911 VWDEQ8N2E2 1590 aa18.34■□□□□ 0.53
SMTN-215ENST00000472911 WASHC2CQ9Y4E1 1318 aa18.33■□□□□ 0.53
SMTN-215ENST00000472911 CFAP65Q6ZU64 1925 aaKnown RBP18.32■□□□□ 0.52
SMTN-215ENST00000472911 TOM1O60784 492 aa18.32■□□□□ 0.52
SMTN-215ENST00000472911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.3■□□□□ 0.524e-8■□□□□ 8.4
SMTN-215ENST00000472911 PZPP20742 1482 aa18.3■□□□□ 0.52
SMTN-215ENST00000472911 NAIPQ13075 1403 aa18.3■□□□□ 0.52
SMTN-215ENST00000472911 CPS1P31327 1500 aa18.29■□□□□ 0.52
SMTN-215ENST00000472911 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
SMTN-215ENST00000472911 HFM1A2PYH4 1435 aa18.28■□□□□ 0.52
SMTN-215ENST00000472911 KANK1Q14678 1352 aa18.28■□□□□ 0.52
SMTN-215ENST00000472911 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
SMTN-215ENST00000472911 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.52
SMTN-215ENST00000472911 NEURL4Q96JN8 1562 aa18.27■□□□□ 0.52
SMTN-215ENST00000472911 ALKQ9UM73 1620 aa18.27■□□□□ 0.51
SMTN-215ENST00000472911 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
SMTN-215ENST00000472911 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
SMTN-215ENST00000472911 TET3O43151 1660 aa18.25■□□□□ 0.51
SMTN-215ENST00000472911 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
SMTN-215ENST00000472911 EFCAB6Q5THR3 1501 aa18.23■□□□□ 0.51
SMTN-215ENST00000472911 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
SMTN-215ENST00000472911 ERVK-7P63135 1459 aa18.21■□□□□ 0.51
SMTN-215ENST00000472911 E9PCH4 1651 aa18.2■□□□□ 0.5
SMTN-215ENST00000472911 TNRQ92752 1358 aa18.19■□□□□ 0.5
SMTN-215ENST00000472911 NUP155O75694 1391 aa18.18■□□□□ 0.5
SMTN-215ENST00000472911 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
SMTN-215ENST00000472911 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
SMTN-215ENST00000472911 SYNMO15061 1565 aa18.15■□□□□ 0.5
SMTN-215ENST00000472911 RPRD2Q5VT52 1461 aaKnown RBP18.14■□□□□ 0.5
SMTN-215ENST00000472911 ANKLE2Q86XL3 938 aa18.14■□□□□ 0.49
SMTN-215ENST00000472911 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
SMTN-215ENST00000472911 NOS1P29475 1434 aa18.13■□□□□ 0.49
SMTN-215ENST00000472911 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
SMTN-215ENST00000472911 NPHP4O75161 1426 aaPredicted RBP18.12■□□□□ 0.49
SMTN-215ENST00000472911 SETD5Q9C0A6 1442 aa18.12■□□□□ 0.49
SMTN-215ENST00000472911 MED14O60244 1454 aa18.12■□□□□ 0.49
SMTN-215ENST00000472911 UBR1Q8IWV7 1749 aa18.1■□□□□ 0.49
SMTN-215ENST00000472911 PIK3C2BO00750 1634 aa18.1■□□□□ 0.49
SMTN-215ENST00000472911 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
SMTN-215ENST00000472911 LRRC7Q96NW7 1537 aa18.09■□□□□ 0.49
SMTN-215ENST00000472911 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.49
SMTN-215ENST00000472911 THEMISQ8N1K5 641 aaPredicted RBP18.08■□□□□ 0.48
SMTN-215ENST00000472911 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
SMTN-215ENST00000472911 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
SMTN-215ENST00000472911 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
SMTN-215ENST00000472911 MYO5BQ9ULV0 1848 aa18.06■□□□□ 0.48
SMTN-215ENST00000472911 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
SMTN-215ENST00000472911 IDI1Q13907 227 aa18.02■□□□□ 0.48
SMTN-215ENST00000472911 ADGRB3O60242 1522 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms