RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
RFXAP-202ENST00000472888 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
RFXAP-202ENST00000472888 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
RFXAP-202ENST00000472888 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
RFXAP-202ENST00000472888 MAP3K9P80192 1104 aa13.14□□□□□ -0.31
RFXAP-202ENST00000472888 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
RFXAP-202ENST00000472888 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
RFXAP-202ENST00000472888 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
RFXAP-202ENST00000472888 COL9A1P20849 921 aa13.12□□□□□ -0.31
RFXAP-202ENST00000472888 E2F4Q16254 413 aa13.12□□□□□ -0.31
RFXAP-202ENST00000472888 PROX2Q3B8N5 592 aa13.12□□□□□ -0.31
RFXAP-202ENST00000472888 CAMK2BQ13554 666 aa13.11□□□□□ -0.31
RFXAP-202ENST00000472888 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
RFXAP-202ENST00000472888 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
RFXAP-202ENST00000472888 BCAMP50895 628 aa13.05□□□□□ -0.32
RFXAP-202ENST00000472888 ANKK1Q8NFD2 765 aa13.03□□□□□ -0.32
RFXAP-202ENST00000472888 SOWAHBA6NEL2 793 aa13.01□□□□□ -0.33
RFXAP-202ENST00000472888 DPYSL4O14531 572 aa13.01□□□□□ -0.33
RFXAP-202ENST00000472888 PHF14O94880 888 aa13□□□□□ -0.33
RFXAP-202ENST00000472888 TYW1BQ6NUM6 668 aa13□□□□□ -0.33
RFXAP-202ENST00000472888 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
RFXAP-202ENST00000472888 P3H3Q8IVL6 736 aa12.99□□□□□ -0.33
RFXAP-202ENST00000472888 FBXW7Q969H0 707 aa12.99□□□□□ -0.33
RFXAP-202ENST00000472888 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
RFXAP-202ENST00000472888 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
RFXAP-202ENST00000472888 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
RFXAP-202ENST00000472888 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
RFXAP-202ENST00000472888 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
RFXAP-202ENST00000472888 ARIH1Q9Y4X5 557 aaPredicted RBP12.96□□□□□ -0.33
RFXAP-202ENST00000472888 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
RFXAP-202ENST00000472888 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
RFXAP-202ENST00000472888 SEPT9Q9UHD8 586 aaPredicted RBP12.93□□□□□ -0.34
RFXAP-202ENST00000472888 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
RFXAP-202ENST00000472888 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
RFXAP-202ENST00000472888 PDIA6Q15084 440 aa12.9□□□□□ -0.34
RFXAP-202ENST00000472888 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
RFXAP-202ENST00000472888 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
RFXAP-202ENST00000472888 EPAS1Q99814 870 aa12.88□□□□□ -0.35
RFXAP-202ENST00000472888 KCNC4Q03721 635 aa12.86□□□□□ -0.35
RFXAP-202ENST00000472888 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
RFXAP-202ENST00000472888 LCE2BO14633 110 aa12.85□□□□□ -0.35
RFXAP-202ENST00000472888 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
RFXAP-202ENST00000472888 Q6ZNB5 142 aa12.84□□□□□ -0.35
RFXAP-202ENST00000472888 DDX12PQ92771 950 aa12.82□□□□□ -0.36
RFXAP-202ENST00000472888 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
RFXAP-202ENST00000472888 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
RFXAP-202ENST00000472888 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.81□□□□□ -0.36
RFXAP-202ENST00000472888 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
RFXAP-202ENST00000472888 TSKSQ9UJT2 592 aa12.79□□□□□ -0.36
RFXAP-202ENST00000472888 LRCH3Q96II8 777 aa12.78□□□□□ -0.36
RFXAP-202ENST00000472888 GRXCR2A6NFK2 248 aa12.77□□□□□ -0.37
RFXAP-202ENST00000472888 NBR1Q14596 966 aa12.76□□□□□ -0.37
RFXAP-202ENST00000472888 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
RFXAP-202ENST00000472888 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
RFXAP-202ENST00000472888 TJAP1Q5JTD0 557 aa12.72□□□□□ -0.37
RFXAP-202ENST00000472888 FAM198AQ9UFP1 575 aa12.72□□□□□ -0.37
RFXAP-202ENST00000472888 MAP3K7O43318 606 aa12.71□□□□□ -0.37
RFXAP-202ENST00000472888 C3orf80F5H4A9 247 aa12.7□□□□□ -0.38
RFXAP-202ENST00000472888 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
RFXAP-202ENST00000472888 SMYD5Q6GMV2 418 aa12.69□□□□□ -0.38
RFXAP-202ENST00000472888 LAPTM4AQ15012 233 aa12.68□□□□□ -0.38
RFXAP-202ENST00000472888 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
RFXAP-202ENST00000472888 SMAPO00193 183 aa12.67□□□□□ -0.38
RFXAP-202ENST00000472888 SEMA3EO15041 775 aa12.66□□□□□ -0.38
RFXAP-202ENST00000472888 GFRA3O60609 400 aa12.66□□□□□ -0.38
RFXAP-202ENST00000472888 PPP4CP60510 307 aa12.66□□□□□ -0.38
RFXAP-202ENST00000472888 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
RFXAP-202ENST00000472888 OSBPP22059 807 aa12.65□□□□□ -0.38
RFXAP-202ENST00000472888 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
RFXAP-202ENST00000472888 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
RFXAP-202ENST00000472888 PRSS12P56730 875 aa12.63□□□□□ -0.39
RFXAP-202ENST00000472888 TRAF7Q6Q0C0 670 aa12.63□□□□□ -0.39
RFXAP-202ENST00000472888 CERKQ8TCT0 537 aa12.63□□□□□ -0.39
RFXAP-202ENST00000472888 MTRQ99707 1265 aa12.63□□□□□ -0.39
RFXAP-202ENST00000472888 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
RFXAP-202ENST00000472888 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
RFXAP-202ENST00000472888 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
RFXAP-202ENST00000472888 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
RFXAP-202ENST00000472888 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
RFXAP-202ENST00000472888 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
RFXAP-202ENST00000472888 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
RFXAP-202ENST00000472888 NRG2O14511 850 aaPredicted RBP12.57□□□□□ -0.4
RFXAP-202ENST00000472888 TATDN2Q93075 761 aa12.57□□□□□ -0.4
RFXAP-202ENST00000472888 APLP1P51693 650 aa12.55□□□□□ -0.4
RFXAP-202ENST00000472888 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
RFXAP-202ENST00000472888 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
RFXAP-202ENST00000472888 PNMA3Q9UL41 463 aa12.54□□□□□ -0.4
RFXAP-202ENST00000472888 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
RFXAP-202ENST00000472888 NBPF26B4DH59 902 aa12.52□□□□□ -0.41
RFXAP-202ENST00000472888 NKX2-3Q8TAU0 364 aa12.51□□□□□ -0.41
RFXAP-202ENST00000472888 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
RFXAP-202ENST00000472888 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
RFXAP-202ENST00000472888 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
RFXAP-202ENST00000472888 TTC13Q8NBP0 860 aa12.47□□□□□ -0.41
RFXAP-202ENST00000472888 FCHSD2O94868 740 aa12.45□□□□□ -0.42
RFXAP-202ENST00000472888 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
RFXAP-202ENST00000472888 RNF40O75150 1001 aa12.44□□□□□ -0.42
RFXAP-202ENST00000472888 PTGDRQ13258 359 aa12.44□□□□□ -0.42
RFXAP-202ENST00000472888 NPDC1Q9NQX5 325 aaPredicted RBP12.44□□□□□ -0.42
RFXAP-202ENST00000472888 PDZRN3Q9UPQ7 1066 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms