RNA–Protein interactions for RNA: ENST00000472429.1

GRIK1-208, Transcript of glutamate ionotropic receptor kainate type subunit 1, humanhuman

TSL 1 (best)

Gene GRIK1, Length 1,775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1-208ENST00000472429 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
GRIK1-208ENST00000472429 KDM5CP41229 1560 aa22.82■■□□□ 1.24
GRIK1-208ENST00000472429 SLC4A1APQ9BWU0 796 aaKnown RBP22.81■■□□□ 1.24
GRIK1-208ENST00000472429 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
GRIK1-208ENST00000472429 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
GRIK1-208ENST00000472429 SPAG9O60271 1321 aaKnown RBP22.8■■□□□ 1.24
GRIK1-208ENST00000472429 CCDC141Q6ZP82 1450 aa22.8■■□□□ 1.24
GRIK1-208ENST00000472429 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
GRIK1-208ENST00000472429 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
GRIK1-208ENST00000472429 YEATS2Q9ULM3 1422 aa22.78■■□□□ 1.24
GRIK1-208ENST00000472429 ARHGEF5Q12774 1597 aa22.78■■□□□ 1.24
GRIK1-208ENST00000472429 ANKRD30AQ9BXX3 1397 aa22.77■■□□□ 1.24
GRIK1-208ENST00000472429 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 MLH3Q9UHC1 1453 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 HECW2Q9P2P5 1572 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 ZFYVE16Q7Z3T8 1539 aa22.76■■□□□ 1.23
GRIK1-208ENST00000472429 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
GRIK1-208ENST00000472429 KDM5DQ9BY66 1539 aa22.73■■□□□ 1.23
GRIK1-208ENST00000472429 BCANQ96GW7 911 aa22.72■■□□□ 1.23
GRIK1-208ENST00000472429 ATP7AQ04656 1500 aa22.71■■□□□ 1.23
GRIK1-208ENST00000472429 ARHGEF40Q8TER5 1519 aa22.71■■□□□ 1.23
GRIK1-208ENST00000472429 KIDINS220Q9ULH0 1771 aa22.71■■□□□ 1.23
GRIK1-208ENST00000472429 INO80Q9ULG1 1556 aaPredicted RBP22.7■■□□□ 1.22
GRIK1-208ENST00000472429 C9orf84Q5VXU9 1444 aa22.7■■□□□ 1.22
GRIK1-208ENST00000472429 HNRNPUQ00839 825 aaKnown RBP eCLIP22.7■■□□□ 1.22
GRIK1-208ENST00000472429 ANKRD50Q9ULJ7 1429 aa22.69■■□□□ 1.22
GRIK1-208ENST00000472429 RTEL1-TNFRSF6BF6WH68 1400 aa22.69■■□□□ 1.22
GRIK1-208ENST00000472429 PRKRIP1Q9H875 184 aaPredicted RBP22.68■■□□□ 1.22
GRIK1-208ENST00000472429 ABCA6Q8N139 1617 aa22.68■■□□□ 1.22
GRIK1-208ENST00000472429 KIF7Q2M1P5 1343 aa22.68■■□□□ 1.22
GRIK1-208ENST00000472429 DIP2CQ9Y2E4 1556 aa22.67■■□□□ 1.22
GRIK1-208ENST00000472429 ATP10AO60312 1499 aa22.67■■□□□ 1.22
GRIK1-208ENST00000472429 UHRF1BP1Q6BDS2 1440 aa22.66■■□□□ 1.22
GRIK1-208ENST00000472429 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.21
GRIK1-208ENST00000472429 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
GRIK1-208ENST00000472429 PKD2Q13563 968 aa22.61■■□□□ 1.21
GRIK1-208ENST00000472429 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
GRIK1-208ENST00000472429 A2MP01023 1474 aa22.59■■□□□ 1.21
GRIK1-208ENST00000472429 BCORL1Q5H9F3 1711 aa22.59■■□□□ 1.21
GRIK1-208ENST00000472429 SIGLEC1Q9BZZ2 1709 aa22.59■■□□□ 1.21
GRIK1-208ENST00000472429 CCDC184Q52MB2 194 aa22.58■■□□□ 1.21
GRIK1-208ENST00000472429 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
GRIK1-208ENST00000472429 USP47Q96K76 1375 aa22.58■■□□□ 1.21
GRIK1-208ENST00000472429 KIF15Q9NS87 1388 aa22.57■■□□□ 1.2
GRIK1-208ENST00000472429 DHX29Q7Z478 1369 aaKnown RBP22.56■■□□□ 1.2
GRIK1-208ENST00000472429 PLXNC1O60486 1568 aa22.56■■□□□ 1.2
GRIK1-208ENST00000472429 REREQ9P2R6 1566 aa22.55■■□□□ 1.2
GRIK1-208ENST00000472429 MLECQ14165 292 aa22.55■■□□□ 1.2
GRIK1-208ENST00000472429 ZBED9Q6R2W3 1325 aa22.55■■□□□ 1.2
GRIK1-208ENST00000472429 NUP155O75694 1391 aa22.55■■□□□ 1.2
GRIK1-208ENST00000472429 MRS2Q9HD23 443 aa22.54■■□□□ 1.2
GRIK1-208ENST00000472429 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
GRIK1-208ENST00000472429 KIF3BO15066 747 aa22.5■■□□□ 1.19
GRIK1-208ENST00000472429 AGLP35573 1532 aa22.5■■□□□ 1.19
GRIK1-208ENST00000472429 DUOX2Q9NRD8 1548 aa22.5■■□□□ 1.19
GRIK1-208ENST00000472429 GGT6Q6P531 493 aa22.47■■□□□ 1.19
GRIK1-208ENST00000472429 KDM4FA0A1W2PPD8 638 aa22.45■■□□□ 1.19
GRIK1-208ENST00000472429 UNC13BO14795 1591 aa22.45■■□□□ 1.18
GRIK1-208ENST00000472429 FAM9BQ8IZU0 186 aa22.45■■□□□ 1.18
GRIK1-208ENST00000472429 ERBINQ96RT1 1412 aa22.44■■□□□ 1.18
GRIK1-208ENST00000472429 FAM135AQ9P2D6 1515 aa22.44■■□□□ 1.18
GRIK1-208ENST00000472429 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
GRIK1-208ENST00000472429 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
GRIK1-208ENST00000472429 E9PCH4 1651 aa22.39■■□□□ 1.17
GRIK1-208ENST00000472429 EIF2AK4Q9P2K8 1649 aaKnown RBP22.39■■□□□ 1.17
GRIK1-208ENST00000472429 PPP4R2Q9NY27 417 aa22.38■■□□□ 1.17
GRIK1-208ENST00000472429 ADAMTSL3P82987 1691 aa22.38■■□□□ 1.17
GRIK1-208ENST00000472429 SMG6Q86US8 1419 aaKnown RBP22.38■■□□□ 1.17
GRIK1-208ENST00000472429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.38■■□□□ 1.17
GRIK1-208ENST00000472429 ANP32EQ9BTT0 268 aa22.37■■□□□ 1.17
GRIK1-208ENST00000472429 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
GRIK1-208ENST00000472429 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
GRIK1-208ENST00000472429 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
GRIK1-208ENST00000472429 KTN1Q86UP2 1357 aaKnown RBP22.36■■□□□ 1.17
GRIK1-208ENST00000472429 TRPM1Q7Z4N2 1603 aa22.35■■□□□ 1.17
GRIK1-208ENST00000472429 LAMC1P11047 1609 aa22.35■■□□□ 1.17
GRIK1-208ENST00000472429 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
GRIK1-208ENST00000472429 IRX6P78412 446 aaPredicted RBP22.34■■□□□ 1.17
GRIK1-208ENST00000472429 RNF17Q9BXT8 1623 aaKnown RBP22.34■■□□□ 1.17
GRIK1-208ENST00000472429 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.16
GRIK1-208ENST00000472429 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
GRIK1-208ENST00000472429 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
GRIK1-208ENST00000472429 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
GRIK1-208ENST00000472429 FER1L4A9Z1Z3 1794 aa22.32■■□□□ 1.16
GRIK1-208ENST00000472429 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
GRIK1-208ENST00000472429 RIMS1Q86UR5 1692 aaKnown RBP22.3■■□□□ 1.16
GRIK1-208ENST00000472429 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
GRIK1-208ENST00000472429 PLA2R1Q13018 1463 aa22.29■■□□□ 1.16
GRIK1-208ENST00000472429 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
GRIK1-208ENST00000472429 GPRASP1Q5JY77 1395 aa22.29■■□□□ 1.16
GRIK1-208ENST00000472429 DEPDC5O75140 1603 aa22.28■■□□□ 1.16
GRIK1-208ENST00000472429 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
GRIK1-208ENST00000472429 PRDM15P57071 1507 aaPredicted RBP22.27■■□□□ 1.16
GRIK1-208ENST00000472429 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
GRIK1-208ENST00000472429 PNISRQ8TF01 805 aaKnown RBP22.27■■□□□ 1.16
GRIK1-208ENST00000472429 KANK1Q14678 1352 aa22.27■■□□□ 1.16
GRIK1-208ENST00000472429 PTPRMP28827 1452 aa22.27■■□□□ 1.15
GRIK1-208ENST00000472429 CLTCQ00610 1675 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms