RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 AFF2P51816 1311 aa17.57■□□□□ 0.4
SPC25-203ENST00000472216 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
SPC25-203ENST00000472216 NGLY1Q96IV0 654 aa17.56■□□□□ 0.4
SPC25-203ENST00000472216 KDM5CP41229 1560 aa17.54■□□□□ 0.4
SPC25-203ENST00000472216 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
SPC25-203ENST00000472216 HRCP23327 699 aa17.52■□□□□ 0.4
SPC25-203ENST00000472216 FGD6Q6ZV73 1430 aa17.52■□□□□ 0.4
SPC25-203ENST00000472216 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
SPC25-203ENST00000472216 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
SPC25-203ENST00000472216 P3H3Q8IVL6 736 aa17.51■□□□□ 0.39
SPC25-203ENST00000472216 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
SPC25-203ENST00000472216 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
SPC25-203ENST00000472216 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
SPC25-203ENST00000472216 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
SPC25-203ENST00000472216 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
SPC25-203ENST00000472216 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
SPC25-203ENST00000472216 ZNF784Q8NCA9 323 aaPredicted RBP17.48■□□□□ 0.39
SPC25-203ENST00000472216 ABCC1P33527 1531 aa17.47■□□□□ 0.39
SPC25-203ENST00000472216 CLTCQ00610 1675 aaKnown RBP17.45■□□□□ 0.38
SPC25-203ENST00000472216 PSDA5PKW4 1024 aaPredicted RBP17.44■□□□□ 0.38
SPC25-203ENST00000472216 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
SPC25-203ENST00000472216 SLAIN2Q9P270 581 aa17.43■□□□□ 0.38
SPC25-203ENST00000472216 XIRP1Q702N8 1843 aaKnown RBP17.42■□□□□ 0.38
SPC25-203ENST00000472216 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
SPC25-203ENST00000472216 NWD1Q149M9 1564 aa17.4■□□□□ 0.38
SPC25-203ENST00000472216 FAM135AQ9P2D6 1515 aa17.4■□□□□ 0.38
SPC25-203ENST00000472216 TMEM94Q12767 1356 aa17.4■□□□□ 0.38
SPC25-203ENST00000472216 TNRQ92752 1358 aa17.4■□□□□ 0.38
SPC25-203ENST00000472216 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.38
SPC25-203ENST00000472216 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
SPC25-203ENST00000472216 GGT6Q6P531 493 aa17.37■□□□□ 0.37
SPC25-203ENST00000472216 DEFB132Q7Z7B7 95 aa17.37■□□□□ 0.37
SPC25-203ENST00000472216 C8orf37Q96NL8 207 aa17.37■□□□□ 0.37
SPC25-203ENST00000472216 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
SPC25-203ENST00000472216 BLMP54132 1417 aaPredicted RBP17.34■□□□□ 0.37
SPC25-203ENST00000472216 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
SPC25-203ENST00000472216 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.37
SPC25-203ENST00000472216 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
SPC25-203ENST00000472216 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
SPC25-203ENST00000472216 SHPRHQ149N8 1683 aa17.32■□□□□ 0.36
SPC25-203ENST00000472216 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
SPC25-203ENST00000472216 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
SPC25-203ENST00000472216 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
SPC25-203ENST00000472216 MSH6P52701 1360 aa17.28■□□□□ 0.36
SPC25-203ENST00000472216 NLRP1Q9C000 1473 aa17.26■□□□□ 0.35
SPC25-203ENST00000472216 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
SPC25-203ENST00000472216 CAPN15O75808 1086 aa17.25■□□□□ 0.35
SPC25-203ENST00000472216 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
SPC25-203ENST00000472216 ARHGAP5Q13017 1502 aa17.25■□□□□ 0.35
SPC25-203ENST00000472216 KIDINS220Q9ULH0 1771 aa17.25■□□□□ 0.35
SPC25-203ENST00000472216 ZC3H13Q5T200 1668 aaKnown RBP17.24■□□□□ 0.35
SPC25-203ENST00000472216 MIA2Q96PC5 1412 aa17.22■□□□□ 0.35
SPC25-203ENST00000472216 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
SPC25-203ENST00000472216 KIF14Q15058 1648 aa17.22■□□□□ 0.35
SPC25-203ENST00000472216 KCNA6P17658 529 aa17.2■□□□□ 0.34
SPC25-203ENST00000472216 USP21Q9UK80 565 aa17.19■□□□□ 0.34
SPC25-203ENST00000472216 R3HDM1Q15032 1099 aaKnown RBP17.18■□□□□ 0.34
SPC25-203ENST00000472216 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
SPC25-203ENST00000472216 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
SPC25-203ENST00000472216 PZPP20742 1482 aa17.15■□□□□ 0.34
SPC25-203ENST00000472216 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
SPC25-203ENST00000472216 ABCC3O15438 1527 aa17.15■□□□□ 0.34
SPC25-203ENST00000472216 PRELPP51888 382 aa17.14■□□□□ 0.33
SPC25-203ENST00000472216 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
SPC25-203ENST00000472216 UTRNP46939 3433 aa17.14■□□□□ 0.33
SPC25-203ENST00000472216 PRDM15P57071 1507 aaPredicted RBP17.12■□□□□ 0.33
SPC25-203ENST00000472216 LTKP29376 864 aa17.11■□□□□ 0.33
SPC25-203ENST00000472216 BAG6P46379 1132 aa17.11■□□□□ 0.33
SPC25-203ENST00000472216 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
SPC25-203ENST00000472216 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
SPC25-203ENST00000472216 A2MP01023 1474 aa17.11■□□□□ 0.33
SPC25-203ENST00000472216 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
SPC25-203ENST00000472216 MSH5O43196 834 aa17.1■□□□□ 0.33
SPC25-203ENST00000472216 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
SPC25-203ENST00000472216 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
SPC25-203ENST00000472216 RTEL1-TNFRSF6BF6WH68 1400 aa17.08■□□□□ 0.32
SPC25-203ENST00000472216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPC25-203ENST00000472216 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
SPC25-203ENST00000472216 PLXNC1O60486 1568 aa17.07■□□□□ 0.32
SPC25-203ENST00000472216 NINLQ9Y2I6 1382 aa17.07■□□□□ 0.32
SPC25-203ENST00000472216 LRRC59Q96AG4 307 aaKnown RBP17.07■□□□□ 0.32
SPC25-203ENST00000472216 ATRNO75882 1429 aa17.06■□□□□ 0.32
SPC25-203ENST00000472216 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
SPC25-203ENST00000472216 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
SPC25-203ENST00000472216 CDK11AQ9UQ88 783 aaPredicted RBP17.04■□□□□ 0.32
SPC25-203ENST00000472216 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
SPC25-203ENST00000472216 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
SPC25-203ENST00000472216 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.31
SPC25-203ENST00000472216 WASHC2CQ9Y4E1 1318 aa17.01■□□□□ 0.31
SPC25-203ENST00000472216 CADPS2Q86UW7 1296 aa17.01■□□□□ 0.31
SPC25-203ENST00000472216 UNC13BO14795 1591 aa16.99■□□□□ 0.31
SPC25-203ENST00000472216 GJD4Q96KN9 370 aaPredicted RBP16.99■□□□□ 0.31
SPC25-203ENST00000472216 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
SPC25-203ENST00000472216 ATF3P18847 181 aa16.97■□□□□ 0.31
SPC25-203ENST00000472216 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
SPC25-203ENST00000472216 KDM5AP29375 1690 aaKnown RBP16.97■□□□□ 0.31
SPC25-203ENST00000472216 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
SPC25-203ENST00000472216 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
SPC25-203ENST00000472216 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
SPC25-203ENST00000472216 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms