RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
MDM2-216ENST00000471946 MAP3K7O43318 606 aa9.1□□□□□ -0.95
MDM2-216ENST00000471946 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
MDM2-216ENST00000471946 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
MDM2-216ENST00000471946 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
MDM2-216ENST00000471946 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
MDM2-216ENST00000471946 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
MDM2-216ENST00000471946 VARS2Q5ST30 1063 aaKnown RBP9.09□□□□□ -0.95
MDM2-216ENST00000471946 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
MDM2-216ENST00000471946 GPIHBP1Q8IV16 184 aa9.09□□□□□ -0.95
MDM2-216ENST00000471946 MMRN1Q13201 1228 aa9.07□□□□□ -0.96
MDM2-216ENST00000471946 NPDC1Q9NQX5 325 aaPredicted RBP9.07□□□□□ -0.96
MDM2-216ENST00000471946 CDHR5Q9HBB8 845 aa9.06□□□□□ -0.96
MDM2-216ENST00000471946 ZMYND10O75800 440 aa9.04□□□□□ -0.96
MDM2-216ENST00000471946 PTGDRQ13258 359 aa9.04□□□□□ -0.96
MDM2-216ENST00000471946 BCL2L12Q9HB09 334 aa9.04□□□□□ -0.96
MDM2-216ENST00000471946 GPR37O15354 613 aa9.03□□□□□ -0.96
MDM2-216ENST00000471946 FCHSD2O94868 740 aa9.02□□□□□ -0.97
MDM2-216ENST00000471946 FECHP22830 423 aa9.02□□□□□ -0.97
MDM2-216ENST00000471946 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
MDM2-216ENST00000471946 ZNF687Q8N1G0 1237 aa9.02□□□□□ -0.97
MDM2-216ENST00000471946 COL9A1P20849 921 aa9.01□□□□□ -0.97
MDM2-216ENST00000471946 PTPREP23469 700 aa9.01□□□□□ -0.97
MDM2-216ENST00000471946 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
MDM2-216ENST00000471946 AXIN2Q9Y2T1 843 aa9.01□□□□□ -0.97
MDM2-216ENST00000471946 PSEN2P49810 448 aa9□□□□□ -0.97
MDM2-216ENST00000471946 KRI1Q8N9T8 703 aaKnown RBP9□□□□□ -0.97
MDM2-216ENST00000471946 GNPATO15228 680 aa8.99□□□□□ -0.97
MDM2-216ENST00000471946 HIC1Q14526 733 aa8.99□□□□□ -0.97
MDM2-216ENST00000471946 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
MDM2-216ENST00000471946 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
MDM2-216ENST00000471946 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
MDM2-216ENST00000471946 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
MDM2-216ENST00000471946 PPP1R3GB7ZBB8 358 aa8.95□□□□□ -0.98
MDM2-216ENST00000471946 PRSS12P56730 875 aa8.95□□□□□ -0.98
MDM2-216ENST00000471946 DMRTA1Q5VZB9 504 aa8.95□□□□□ -0.98
MDM2-216ENST00000471946 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
MDM2-216ENST00000471946 IRF6O14896 467 aa8.93□□□□□ -0.98
MDM2-216ENST00000471946 PROX2Q3B8N5 592 aa8.93□□□□□ -0.98
MDM2-216ENST00000471946 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
MDM2-216ENST00000471946 KCNH8Q96L42 1107 aa8.93□□□□□ -0.98
MDM2-216ENST00000471946 FAM198AQ9UFP1 575 aa8.93□□□□□ -0.98
MDM2-216ENST00000471946 MINK1Q8N4C8 1332 aaPredicted RBP8.93□□□□□ -0.98
MDM2-216ENST00000471946 PBX2P40425 430 aa8.92□□□□□ -0.98
MDM2-216ENST00000471946 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
MDM2-216ENST00000471946 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
MDM2-216ENST00000471946 TSKSQ9UJT2 592 aa8.92□□□□□ -0.98
MDM2-216ENST00000471946 MAP2K5Q13163 448 aa8.91□□□□□ -0.98
MDM2-216ENST00000471946 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
MDM2-216ENST00000471946 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
MDM2-216ENST00000471946 AK7Q96M32 723 aa8.91□□□□□ -0.98
MDM2-216ENST00000471946 TRIM6-TRIM34B2RNG4 842 aa8.9□□□□□ -0.98
MDM2-216ENST00000471946 C3orf80F5H4A9 247 aa8.89□□□□□ -0.99
MDM2-216ENST00000471946 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
MDM2-216ENST00000471946 ONECUT3O60422 494 aaPredicted RBP8.88□□□□□ -0.99
MDM2-216ENST00000471946 PACS2Q86VP3 889 aa8.88□□□□□ -0.99
MDM2-216ENST00000471946 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
MDM2-216ENST00000471946 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
MDM2-216ENST00000471946 CCDC102AQ96A19 550 aa8.87□□□□□ -0.99
MDM2-216ENST00000471946 SLC4A5Q9BY07 1137 aa8.87□□□□□ -0.99
MDM2-216ENST00000471946 TRIM66O15016 1216 aa8.86□□□□□ -0.99
MDM2-216ENST00000471946 LSM11P83369 360 aaKnown RBP eCLIP8.86□□□□□ -0.99
MDM2-216ENST00000471946 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
MDM2-216ENST00000471946 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
MDM2-216ENST00000471946 SMAPO00193 183 aa8.85□□□□□ -0.99
MDM2-216ENST00000471946 OATP04181 439 aa8.85□□□□□ -0.99
MDM2-216ENST00000471946 TATDN2Q93075 761 aa8.85□□□□□ -0.99
MDM2-216ENST00000471946 PHOX2BQ99453 314 aa8.85□□□□□ -0.99
MDM2-216ENST00000471946 EYA1Q99502 592 aa8.84□□□□□ -0.99
MDM2-216ENST00000471946 RABGEF1Q9UJ41 708 aa8.84□□□□□ -0.99
MDM2-216ENST00000471946 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
MDM2-216ENST00000471946 TK2O00142 265 aa8.83□□□□□ -1
MDM2-216ENST00000471946 PXYLP1Q8TE99 480 aa8.83□□□□□ -1
MDM2-216ENST00000471946 RNF166Q96A37 237 aaPredicted RBP8.83□□□□□ -1
MDM2-216ENST00000471946 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
MDM2-216ENST00000471946 ADGRD1Q6QNK2 874 aa8.82□□□□□ -1
MDM2-216ENST00000471946 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
MDM2-216ENST00000471946 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
MDM2-216ENST00000471946 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
MDM2-216ENST00000471946 NLRP7Q8WX94 980 aa8.81□□□□□ -1
MDM2-216ENST00000471946 NBPF26B4DH59 902 aa8.8□□□□□ -1
MDM2-216ENST00000471946 PDE4DQ08499 809 aa8.8□□□□□ -1
MDM2-216ENST00000471946 SEPT9Q9UHD8 586 aaPredicted RBP8.8□□□□□ -1
MDM2-216ENST00000471946 HRO43593 1189 aa8.79□□□□□ -1
MDM2-216ENST00000471946 RCCD1A6NED2 376 aa8.78□□□□□ -1
MDM2-216ENST00000471946 REPIN1Q9BWE0 567 aaKnown RBP8.78□□□□□ -1
MDM2-216ENST00000471946 AMHR2Q16671 573 aa8.77□□□□□ -1.01
MDM2-216ENST00000471946 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
MDM2-216ENST00000471946 MDM2Q00987 491 aaPredicted RBP8.76□□□□□ -1.01
MDM2-216ENST00000471946 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
MDM2-216ENST00000471946 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
MDM2-216ENST00000471946 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
MDM2-216ENST00000471946 NBPF3Q9H094 633 aa8.75□□□□□ -1.01
MDM2-216ENST00000471946 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
MDM2-216ENST00000471946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
MDM2-216ENST00000471946 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
MDM2-216ENST00000471946 LAPTM4BQ86VI4 370 aa8.74□□□□□ -1.01
MDM2-216ENST00000471946 TMUB1Q9BVT8 246 aa8.74□□□□□ -1.01
MDM2-216ENST00000471946 DNAJB2P25686 324 aa8.73□□□□□ -1.01
MDM2-216ENST00000471946 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms