RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 PTPREP23469 700 aa10.52□□□□□ -0.73
CDHR3-208ENST00000471910 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
CDHR3-208ENST00000471910 BCL2L12Q9HB09 334 aa10.52□□□□□ -0.73
CDHR3-208ENST00000471910 PTGDRQ13258 359 aa10.51□□□□□ -0.73
CDHR3-208ENST00000471910 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
CDHR3-208ENST00000471910 VARS2Q5ST30 1063 aaKnown RBP10.51□□□□□ -0.73
CDHR3-208ENST00000471910 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
CDHR3-208ENST00000471910 GNPATO15228 680 aa10.5□□□□□ -0.73
CDHR3-208ENST00000471910 FAM205CA6NFA0 338 aa10.49□□□□□ -0.73
CDHR3-208ENST00000471910 CDHR5Q9HBB8 845 aa10.49□□□□□ -0.73
CDHR3-208ENST00000471910 GPR37O15354 613 aa10.47□□□□□ -0.73
CDHR3-208ENST00000471910 NPDC1Q9NQX5 325 aaPredicted RBP10.46□□□□□ -0.73
CDHR3-208ENST00000471910 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
CDHR3-208ENST00000471910 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
CDHR3-208ENST00000471910 PPP1R3GB7ZBB8 358 aa10.44□□□□□ -0.74
CDHR3-208ENST00000471910 ZNF687Q8N1G0 1237 aa10.44□□□□□ -0.74
CDHR3-208ENST00000471910 KCNK17Q96T54 332 aa10.44□□□□□ -0.74
CDHR3-208ENST00000471910 ARHGAP33O14559 1287 aa10.43□□□□□ -0.74
CDHR3-208ENST00000471910 PBX2P40425 430 aa10.43□□□□□ -0.74
CDHR3-208ENST00000471910 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
CDHR3-208ENST00000471910 AK7Q96M32 723 aa10.43□□□□□ -0.74
CDHR3-208ENST00000471910 HS3ST6Q96QI5 342 aa10.43□□□□□ -0.74
CDHR3-208ENST00000471910 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
CDHR3-208ENST00000471910 PRSS12P56730 875 aa10.41□□□□□ -0.74
CDHR3-208ENST00000471910 IRF6O14896 467 aa10.4□□□□□ -0.74
CDHR3-208ENST00000471910 COL9A1P20849 921 aa10.4□□□□□ -0.74
CDHR3-208ENST00000471910 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
CDHR3-208ENST00000471910 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.74
CDHR3-208ENST00000471910 FECHP22830 423 aa10.39□□□□□ -0.75
CDHR3-208ENST00000471910 PADI6Q6TGC4 694 aa10.39□□□□□ -0.75
CDHR3-208ENST00000471910 PSEN2P49810 448 aa10.37□□□□□ -0.75
CDHR3-208ENST00000471910 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
CDHR3-208ENST00000471910 OATP04181 439 aa10.36□□□□□ -0.75
CDHR3-208ENST00000471910 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
CDHR3-208ENST00000471910 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
CDHR3-208ENST00000471910 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
CDHR3-208ENST00000471910 CCDC102AQ96A19 550 aa10.35□□□□□ -0.75
CDHR3-208ENST00000471910 POTEB3A0JP26 581 aa10.34□□□□□ -0.75
CDHR3-208ENST00000471910 POTEBQ6S5H4 581 aa10.34□□□□□ -0.75
CDHR3-208ENST00000471910 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
CDHR3-208ENST00000471910 ZBED2Q9BTP6 218 aa10.34□□□□□ -0.75
CDHR3-208ENST00000471910 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
CDHR3-208ENST00000471910 NBPF26B4DH59 902 aa10.32□□□□□ -0.76
CDHR3-208ENST00000471910 TRIM66O15016 1216 aa10.32□□□□□ -0.76
CDHR3-208ENST00000471910 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
CDHR3-208ENST00000471910 RBM46Q8TBY0 533 aaKnown RBP10.32□□□□□ -0.76
CDHR3-208ENST00000471910 PROX2Q3B8N5 592 aa10.31□□□□□ -0.76
CDHR3-208ENST00000471910 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
CDHR3-208ENST00000471910 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
CDHR3-208ENST00000471910 ADGRG1Q9Y653 693 aa10.31□□□□□ -0.76
CDHR3-208ENST00000471910 PNMA3Q9UL41 463 aa10.3□□□□□ -0.76
CDHR3-208ENST00000471910 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
CDHR3-208ENST00000471910 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
CDHR3-208ENST00000471910 TK2O00142 265 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 PDE4DQ08499 809 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 NUDT18Q6ZVK8 323 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 TATDN2Q93075 761 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
CDHR3-208ENST00000471910 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
CDHR3-208ENST00000471910 METTL3Q86U44 580 aaKnown RBP10.27□□□□□ -0.77
CDHR3-208ENST00000471910 PXYLP1Q8TE99 480 aa10.27□□□□□ -0.77
CDHR3-208ENST00000471910 VPS9D1Q9Y2B5 631 aa10.27□□□□□ -0.77
CDHR3-208ENST00000471910 AMHR2Q16671 573 aa10.26□□□□□ -0.77
CDHR3-208ENST00000471910 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
CDHR3-208ENST00000471910 POTEGQ6S5H5 508 aa10.25□□□□□ -0.77
CDHR3-208ENST00000471910 ANKRD13DQ6ZTN6 518 aa10.25□□□□□ -0.77
CDHR3-208ENST00000471910 NBPF3Q9H094 633 aa10.25□□□□□ -0.77
CDHR3-208ENST00000471910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.24□□□□□ -0.77
CDHR3-208ENST00000471910 POTEMA6NI47 508 aa10.24□□□□□ -0.77
CDHR3-208ENST00000471910 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
CDHR3-208ENST00000471910 EYA1Q99502 592 aa10.24□□□□□ -0.77
CDHR3-208ENST00000471910 CLCN1P35523 988 aa10.23□□□□□ -0.77
CDHR3-208ENST00000471910 HDGFP51858 240 aaKnown RBP10.23□□□□□ -0.77
CDHR3-208ENST00000471910 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
CDHR3-208ENST00000471910 ADGRD1Q6QNK2 874 aa10.23□□□□□ -0.77
CDHR3-208ENST00000471910 SMAPO00193 183 aa10.22□□□□□ -0.77
CDHR3-208ENST00000471910 DNAJB2P25686 324 aa10.22□□□□□ -0.77
CDHR3-208ENST00000471910 RCCD1A6NED2 376 aa10.21□□□□□ -0.77
CDHR3-208ENST00000471910 LAPTM4BQ86VI4 370 aa10.21□□□□□ -0.77
CDHR3-208ENST00000471910 GPCPD1Q9NPB8 672 aa10.21□□□□□ -0.77
CDHR3-208ENST00000471910 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-208ENST00000471910 MRPL50Q8N5N7 158 aaKnown RBP10.2□□□□□ -0.78
CDHR3-208ENST00000471910 PHOX2BQ99453 314 aa10.2□□□□□ -0.78
CDHR3-208ENST00000471910 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-208ENST00000471910 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
CDHR3-208ENST00000471910 CDAN1Q8IWY9 1227 aa10.19□□□□□ -0.78
CDHR3-208ENST00000471910 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
CDHR3-208ENST00000471910 GOLGA8CPA6NN73 597 aa10.18□□□□□ -0.78
CDHR3-208ENST00000471910 C3orf80F5H4A9 247 aa10.18□□□□□ -0.78
CDHR3-208ENST00000471910 SLC4A3P48751 1232 aa10.18□□□□□ -0.78
CDHR3-208ENST00000471910 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
CDHR3-208ENST00000471910 KDM4CQ9H3R0 1056 aa10.18□□□□□ -0.78
CDHR3-208ENST00000471910 BHMG1C9JSJ3 638 aaPredicted RBP10.17□□□□□ -0.78
CDHR3-208ENST00000471910 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
CDHR3-208ENST00000471910 GIGYF2Q6Y7W6 1299 aaKnown RBP10.16□□□□□ -0.78
CDHR3-208ENST00000471910 RSPH4AQ5TD94 716 aa10.15□□□□□ -0.78
CDHR3-208ENST00000471910 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
CDHR3-208ENST00000471910 KRTAP3-3Q9BYR6 98 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms