RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CARD11Q9BXL7 1154 aa14.63□□□□□ -0.07
APLF-204ENST00000471727 MAGI2Q86UL8 1455 aa14.62□□□□□ -0.07
APLF-204ENST00000471727 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
APLF-204ENST00000471727 ZNF326Q5BKZ1 582 aaKnown RBP14.61□□□□□ -0.07
APLF-204ENST00000471727 ABCC1P33527 1531 aa14.61□□□□□ -0.07
APLF-204ENST00000471727 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.07
APLF-204ENST00000471727 DCAF11Q8TEB1 546 aa14.6□□□□□ -0.07
APLF-204ENST00000471727 STAC3Q96MF2 364 aa14.59□□□□□ -0.07
APLF-204ENST00000471727 KTN1Q86UP2 1357 aaKnown RBP14.58□□□□□ -0.08
APLF-204ENST00000471727 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
APLF-204ENST00000471727 FKBP8Q14318 412 aa14.57□□□□□ -0.08
APLF-204ENST00000471727 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
APLF-204ENST00000471727 WDR7Q9Y4E6 1490 aa14.57□□□□□ -0.08
APLF-204ENST00000471727 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
APLF-204ENST00000471727 PLA2R1Q13018 1463 aa14.56□□□□□ -0.08
APLF-204ENST00000471727 PRAG1Q86YV5 1406 aa14.56□□□□□ -0.08
APLF-204ENST00000471727 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
APLF-204ENST00000471727 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
APLF-204ENST00000471727 ERICH6BQ5W0A0 696 aa14.55□□□□□ -0.08
APLF-204ENST00000471727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.55□□□□□ -0.08
APLF-204ENST00000471727 TRAPPC8Q9Y2L5 1435 aa14.55□□□□□ -0.08
APLF-204ENST00000471727 BCORL1Q5H9F3 1711 aa14.53□□□□□ -0.08
APLF-204ENST00000471727 LAMC1P11047 1609 aa14.53□□□□□ -0.08
APLF-204ENST00000471727 ZBED9Q6R2W3 1325 aa14.53□□□□□ -0.08
APLF-204ENST00000471727 ST20-MTHFSA0A0A6YYL1 179 aa14.52□□□□□ -0.08
APLF-204ENST00000471727 EIF2AK4Q9P2K8 1649 aaKnown RBP14.52□□□□□ -0.08
APLF-204ENST00000471727 A2MP01023 1474 aa14.51□□□□□ -0.09
APLF-204ENST00000471727 TRPM1Q7Z4N2 1603 aa14.5□□□□□ -0.09
APLF-204ENST00000471727 ABCA9Q8IUA7 1624 aa14.5□□□□□ -0.09
APLF-204ENST00000471727 KANK1Q14678 1352 aa14.5□□□□□ -0.09
APLF-204ENST00000471727 RALBP1Q15311 655 aa14.5□□□□□ -0.09
APLF-204ENST00000471727 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
APLF-204ENST00000471727 ZFYVE16Q7Z3T8 1539 aa14.49□□□□□ -0.09
APLF-204ENST00000471727 FANCAO15360 1455 aa14.49□□□□□ -0.09
APLF-204ENST00000471727 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
APLF-204ENST00000471727 WASHC2CQ9Y4E1 1318 aa14.48□□□□□ -0.09
APLF-204ENST00000471727 RGL3Q3MIN7 710 aa14.48□□□□□ -0.09
APLF-204ENST00000471727 POLR3GLQ9BT43 218 aa14.48□□□□□ -0.09
APLF-204ENST00000471727 PTPRTO14522 1441 aa14.47□□□□□ -0.09
APLF-204ENST00000471727 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
APLF-204ENST00000471727 AFAP1Q8N556 730 aa14.47□□□□□ -0.09
APLF-204ENST00000471727 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
APLF-204ENST00000471727 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
APLF-204ENST00000471727 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
APLF-204ENST00000471727 BRD4O60885 1362 aaPredicted RBP14.45□□□□□ -0.1
APLF-204ENST00000471727 DEPDC5O75140 1603 aa14.45□□□□□ -0.1
APLF-204ENST00000471727 ASXL2Q76L83 1435 aa14.45□□□□□ -0.1
APLF-204ENST00000471727 TRPM2O94759 1503 aa14.44□□□□□ -0.1
APLF-204ENST00000471727 INO80Q9ULG1 1556 aaPredicted RBP14.44□□□□□ -0.1
APLF-204ENST00000471727 SCAPERQ9BY12 1400 aa14.44□□□□□ -0.1
APLF-204ENST00000471727 ADGRL1O94910 1474 aa14.44□□□□□ -0.1
APLF-204ENST00000471727 NEURL4Q96JN8 1562 aa14.44□□□□□ -0.1
APLF-204ENST00000471727 MYBBP1AQ9BQG0 1328 aaKnown RBP14.44□□□□□ -0.1
APLF-204ENST00000471727 SLC24A1O60721 1099 aa14.43□□□□□ -0.1
APLF-204ENST00000471727 VWDEQ8N2E2 1590 aa14.42□□□□□ -0.1
APLF-204ENST00000471727 TMF1P82094 1093 aa14.42□□□□□ -0.1
APLF-204ENST00000471727 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
APLF-204ENST00000471727 TET3O43151 1660 aa14.42□□□□□ -0.1
APLF-204ENST00000471727 NBPF1Q3BBV0 1214 aa14.41□□□□□ -0.1
APLF-204ENST00000471727 COL17A1Q9UMD9 1497 aaPredicted RBP14.41□□□□□ -0.1
APLF-204ENST00000471727 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
APLF-204ENST00000471727 E9PCH4 1651 aa14.4□□□□□ -0.1
APLF-204ENST00000471727 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
APLF-204ENST00000471727 BCANQ96GW7 911 aa14.4□□□□□ -0.1
APLF-204ENST00000471727 TESK2Q96S53 571 aa14.4□□□□□ -0.1
APLF-204ENST00000471727 TSHZ2Q9NRE2 1034 aa14.39□□□□□ -0.11
APLF-204ENST00000471727 CFAP74Q9C0B2 1584 aa14.39□□□□□ -0.11
APLF-204ENST00000471727 ZNF518AQ6AHZ1 1483 aa14.39□□□□□ -0.11
APLF-204ENST00000471727 SMG6Q86US8 1419 aaKnown RBP14.38□□□□□ -0.11
APLF-204ENST00000471727 INSRP06213 1382 aa14.38□□□□□ -0.11
APLF-204ENST00000471727 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
APLF-204ENST00000471727 KIF3BO15066 747 aa14.37□□□□□ -0.11
APLF-204ENST00000471727 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
APLF-204ENST00000471727 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
APLF-204ENST00000471727 LRPPRCP42704 1394 aaKnown RBP14.37□□□□□ -0.11
APLF-204ENST00000471727 PARD3Q8TEW0 1356 aa14.37□□□□□ -0.11
APLF-204ENST00000471727 SPHKAPQ2M3C7 1700 aa14.36□□□□□ -0.11
APLF-204ENST00000471727 LMTK2Q8IWU2 1503 aa14.36□□□□□ -0.11
APLF-204ENST00000471727 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
APLF-204ENST00000471727 CEP152O94986 1710 aa14.35□□□□□ -0.11
APLF-204ENST00000471727 PPP4R2Q9NY27 417 aa14.35□□□□□ -0.11
APLF-204ENST00000471727 MADDQ8WXG6 1647 aa14.34□□□□□ -0.11
APLF-204ENST00000471727 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
APLF-204ENST00000471727 EIF3AQ14152 1382 aaKnown RBP14.34□□□□□ -0.11
APLF-204ENST00000471727 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
APLF-204ENST00000471727 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
APLF-204ENST00000471727 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.11
APLF-204ENST00000471727 MLH3Q9UHC1 1453 aa14.33□□□□□ -0.12
APLF-204ENST00000471727 CLTCL1P53675 1640 aa14.32□□□□□ -0.12
APLF-204ENST00000471727 KIAA1210Q9ULL0 1709 aa14.32□□□□□ -0.12
APLF-204ENST00000471727 DISP3Q9P2K9 1392 aa14.32□□□□□ -0.12
APLF-204ENST00000471727 MYT1Q01538 1121 aa14.31□□□□□ -0.12
APLF-204ENST00000471727 MYOM2P54296 1465 aa14.31□□□□□ -0.12
APLF-204ENST00000471727 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
APLF-204ENST00000471727 EFCAB6Q5THR3 1501 aa14.3□□□□□ -0.12
APLF-204ENST00000471727 POGZQ7Z3K3 1410 aa14.3□□□□□ -0.12
APLF-204ENST00000471727 KIDINS220Q9ULH0 1771 aa14.3□□□□□ -0.12
APLF-204ENST00000471727 NEO1Q92859 1461 aa14.3□□□□□ -0.12
APLF-204ENST00000471727 PDE3BQ13370 1112 aa14.3□□□□□ -0.12
APLF-204ENST00000471727 PANK3Q9H999 370 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms