RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CDAN1Q8IWY9 1227 aa12.33□□□□□ -0.44
SMC5-202ENST00000471372 PTGER2P43116 358 aa12.32□□□□□ -0.44
SMC5-202ENST00000471372 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
SMC5-202ENST00000471372 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
SMC5-202ENST00000471372 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
SMC5-202ENST00000471372 G3V3G9 751 aa12.29□□□□□ -0.44
SMC5-202ENST00000471372 FLIIQ13045 1269 aa12.29□□□□□ -0.44
SMC5-202ENST00000471372 TMEM92Q6UXU6 159 aa12.29□□□□□ -0.44
SMC5-202ENST00000471372 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
SMC5-202ENST00000471372 PTGDRQ13258 359 aa12.28□□□□□ -0.44
SMC5-202ENST00000471372 MS4A1P11836 297 aa12.27□□□□□ -0.45
SMC5-202ENST00000471372 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
SMC5-202ENST00000471372 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
SMC5-202ENST00000471372 APBB1O00213 710 aa12.26□□□□□ -0.45
SMC5-202ENST00000471372 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
SMC5-202ENST00000471372 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
SMC5-202ENST00000471372 EVI5O60447 810 aa12.24□□□□□ -0.45
SMC5-202ENST00000471372 TBC1D12O60347 775 aa12.23□□□□□ -0.45
SMC5-202ENST00000471372 MARVELD3Q96A59 401 aa12.22□□□□□ -0.45
SMC5-202ENST00000471372 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
SMC5-202ENST00000471372 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
SMC5-202ENST00000471372 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
SMC5-202ENST00000471372 HRCP23327 699 aa12.17□□□□□ -0.46
SMC5-202ENST00000471372 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
SMC5-202ENST00000471372 NPDC1Q9NQX5 325 aaPredicted RBP12.16□□□□□ -0.46
SMC5-202ENST00000471372 A6NJR5 290 aa12.15□□□□□ -0.46
SMC5-202ENST00000471372 EMP3P54852 163 aa12.15□□□□□ -0.46
SMC5-202ENST00000471372 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
SMC5-202ENST00000471372 TRAK2O60296 914 aa12.13□□□□□ -0.47
SMC5-202ENST00000471372 CLCN1P35523 988 aa12.12□□□□□ -0.47
SMC5-202ENST00000471372 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
SMC5-202ENST00000471372 MCM6Q14566 821 aa12.12□□□□□ -0.47
SMC5-202ENST00000471372 PTCD2Q8WV60 388 aaKnown RBP12.12□□□□□ -0.47
SMC5-202ENST00000471372 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
SMC5-202ENST00000471372 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
SMC5-202ENST00000471372 ANO8Q9HCE9 1232 aaPredicted RBP12.11□□□□□ -0.47
SMC5-202ENST00000471372 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
SMC5-202ENST00000471372 CCDC82Q8N4S0 544 aa12.1□□□□□ -0.47
SMC5-202ENST00000471372 MAP3K7O43318 606 aa12.09□□□□□ -0.47
SMC5-202ENST00000471372 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
SMC5-202ENST00000471372 RBM33Q96EV2 1170 aaKnown RBP12.08□□□□□ -0.48
SMC5-202ENST00000471372 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
SMC5-202ENST00000471372 PHF14O94880 888 aa12.06□□□□□ -0.48
SMC5-202ENST00000471372 TSR1Q2NL82 804 aaKnown RBP12.06□□□□□ -0.48
SMC5-202ENST00000471372 EPAS1Q99814 870 aa12.06□□□□□ -0.48
SMC5-202ENST00000471372 FAM205CA6NFA0 338 aa12.05□□□□□ -0.48
SMC5-202ENST00000471372 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
SMC5-202ENST00000471372 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
SMC5-202ENST00000471372 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
SMC5-202ENST00000471372 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
SMC5-202ENST00000471372 ZNF710Q8N1W2 664 aa12.04□□□□□ -0.48
SMC5-202ENST00000471372 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
SMC5-202ENST00000471372 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
SMC5-202ENST00000471372 PCDHGA10Q9Y5H3 936 aa12.04□□□□□ -0.48
SMC5-202ENST00000471372 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
SMC5-202ENST00000471372 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
SMC5-202ENST00000471372 POM121Q96HA1 1249 aa12.02□□□□□ -0.49
SMC5-202ENST00000471372 FAM217BQ9NTX9 383 aaPredicted RBP12.02□□□□□ -0.49
SMC5-202ENST00000471372 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
SMC5-202ENST00000471372 SLC34A2O95436 690 aa12.01□□□□□ -0.49
SMC5-202ENST00000471372 PROSER2Q86WR7 435 aaPredicted RBP12.01□□□□□ -0.49
SMC5-202ENST00000471372 ATP1B4Q9UN42 357 aaPredicted RBP12.01□□□□□ -0.49
SMC5-202ENST00000471372 POTEB3A0JP26 581 aa12□□□□□ -0.49
SMC5-202ENST00000471372 POTEBQ6S5H4 581 aa12□□□□□ -0.49
SMC5-202ENST00000471372 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
SMC5-202ENST00000471372 PDIA4P13667 645 aaKnown RBP11.99□□□□□ -0.49
SMC5-202ENST00000471372 MMRN1Q13201 1228 aa11.99□□□□□ -0.49
SMC5-202ENST00000471372 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
SMC5-202ENST00000471372 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
SMC5-202ENST00000471372 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
SMC5-202ENST00000471372 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
SMC5-202ENST00000471372 HOXB1P14653 301 aaPredicted RBP11.97□□□□□ -0.49
SMC5-202ENST00000471372 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
SMC5-202ENST00000471372 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMC5-202ENST00000471372 OATP04181 439 aa11.94□□□□□ -0.5
SMC5-202ENST00000471372 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
SMC5-202ENST00000471372 KRTAP3-3Q9BYR6 98 aa11.94□□□□□ -0.5
SMC5-202ENST00000471372 KRTAP3-2Q9BYR7 98 aa11.94□□□□□ -0.5
SMC5-202ENST00000471372 ADGRG1Q9Y653 693 aa11.94□□□□□ -0.5
SMC5-202ENST00000471372 RAD21O60216 631 aa11.93□□□□□ -0.5
SMC5-202ENST00000471372 PXYLP1Q8TE99 480 aa11.93□□□□□ -0.5
SMC5-202ENST00000471372 PCDHGA4Q9Y5G9 962 aa11.93□□□□□ -0.5
SMC5-202ENST00000471372 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
SMC5-202ENST00000471372 NECTIN2Q92692 538 aa11.92□□□□□ -0.5
SMC5-202ENST00000471372 FBXW7Q969H0 707 aa11.92□□□□□ -0.5
SMC5-202ENST00000471372 ERBB3P21860 1342 aa11.91□□□□□ -0.5
SMC5-202ENST00000471372 CLK2P49760 499 aaKnown RBP11.91□□□□□ -0.5
SMC5-202ENST00000471372 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
SMC5-202ENST00000471372 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
SMC5-202ENST00000471372 JPH4Q96JJ6 628 aa11.9□□□□□ -0.5
SMC5-202ENST00000471372 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
SMC5-202ENST00000471372 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
SMC5-202ENST00000471372 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
SMC5-202ENST00000471372 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
SMC5-202ENST00000471372 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
SMC5-202ENST00000471372 RFC5P40937 340 aa11.88□□□□□ -0.51
SMC5-202ENST00000471372 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
SMC5-202ENST00000471372 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
SMC5-202ENST00000471372 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
SMC5-202ENST00000471372 ZSWIM6Q9HCJ5 1215 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms