RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 PTPRGP23470 1445 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 PTMSP20962 102 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 GCC2Q8IWJ2 1684 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 WASHC2AQ641Q2 1341 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 CCDC144AA2RUR9 1427 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 RAPGEF6Q8TEU7 1601 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
RRP1B-202ENST00000470886 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
RRP1B-202ENST00000470886 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
RRP1B-202ENST00000470886 ARXQ96QS3 562 aa13.47□□□□□ -0.25
RRP1B-202ENST00000470886 ANKRD30BQ9BXX2 1392 aa13.47□□□□□ -0.25
RRP1B-202ENST00000470886 ABCC5O15440 1437 aa13.47□□□□□ -0.25
RRP1B-202ENST00000470886 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
RRP1B-202ENST00000470886 KIF14Q15058 1648 aa13.46□□□□□ -0.25
RRP1B-202ENST00000470886 CAMSAP2Q08AD1 1489 aa13.46□□□□□ -0.25
RRP1B-202ENST00000470886 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
RRP1B-202ENST00000470886 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
RRP1B-202ENST00000470886 HSCBQ8IWL3 235 aa13.46□□□□□ -0.25
RRP1B-202ENST00000470886 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
RRP1B-202ENST00000470886 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.26
RRP1B-202ENST00000470886 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
RRP1B-202ENST00000470886 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
RRP1B-202ENST00000470886 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
RRP1B-202ENST00000470886 KIF7Q2M1P5 1343 aa13.45□□□□□ -0.26
RRP1B-202ENST00000470886 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
RRP1B-202ENST00000470886 NEUROD2Q15784 382 aa13.44□□□□□ -0.26
RRP1B-202ENST00000470886 C9orf84Q5VXU9 1444 aa13.44□□□□□ -0.26
RRP1B-202ENST00000470886 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
RRP1B-202ENST00000470886 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
RRP1B-202ENST00000470886 CDK11BP21127 795 aaKnown RBP13.43□□□□□ -0.26
RRP1B-202ENST00000470886 IPO8O15397 1037 aaKnown RBP13.43□□□□□ -0.26
RRP1B-202ENST00000470886 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
RRP1B-202ENST00000470886 PTPRKQ15262 1439 aa13.43□□□□□ -0.26
RRP1B-202ENST00000470886 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-202ENST00000470886 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
RRP1B-202ENST00000470886 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
RRP1B-202ENST00000470886 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
RRP1B-202ENST00000470886 WASHC2CQ9Y4E1 1318 aa13.41□□□□□ -0.26
RRP1B-202ENST00000470886 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
RRP1B-202ENST00000470886 TARBP1Q13395 1621 aaKnown RBP13.41□□□□□ -0.26
RRP1B-202ENST00000470886 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
RRP1B-202ENST00000470886 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
RRP1B-202ENST00000470886 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.27
RRP1B-202ENST00000470886 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
RRP1B-202ENST00000470886 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
RRP1B-202ENST00000470886 POGKQ9P215 609 aa13.39□□□□□ -0.27
RRP1B-202ENST00000470886 PDE4AP27815 886 aa13.39□□□□□ -0.27
RRP1B-202ENST00000470886 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
RRP1B-202ENST00000470886 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
RRP1B-202ENST00000470886 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
RRP1B-202ENST00000470886 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
RRP1B-202ENST00000470886 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
RRP1B-202ENST00000470886 GBP4Q96PP9 640 aa13.36□□□□□ -0.27
RRP1B-202ENST00000470886 NUP153P49790 1475 aaKnown RBP13.36□□□□□ -0.27
RRP1B-202ENST00000470886 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
RRP1B-202ENST00000470886 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
RRP1B-202ENST00000470886 ADGRL2O95490 1459 aa13.35□□□□□ -0.27
RRP1B-202ENST00000470886 CENPJQ9HC77 1338 aaPredicted RBP13.35□□□□□ -0.27
RRP1B-202ENST00000470886 PTMAP06454 111 aaKnown RBP13.35□□□□□ -0.27
RRP1B-202ENST00000470886 ADGBQ8N7X0 1667 aa13.34□□□□□ -0.27
RRP1B-202ENST00000470886 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
RRP1B-202ENST00000470886 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
RRP1B-202ENST00000470886 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
RRP1B-202ENST00000470886 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
RRP1B-202ENST00000470886 AAMPQ13685 434 aa13.33□□□□□ -0.27
RRP1B-202ENST00000470886 E9PSI1 815 aa13.33□□□□□ -0.28
RRP1B-202ENST00000470886 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
RRP1B-202ENST00000470886 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
RRP1B-202ENST00000470886 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
RRP1B-202ENST00000470886 PANK3Q9H999 370 aa13.32□□□□□ -0.28
RRP1B-202ENST00000470886 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-202ENST00000470886 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
RRP1B-202ENST00000470886 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
RRP1B-202ENST00000470886 MCCP23508 829 aa13.3□□□□□ -0.28
RRP1B-202ENST00000470886 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
RRP1B-202ENST00000470886 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
RRP1B-202ENST00000470886 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
RRP1B-202ENST00000470886 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
RRP1B-202ENST00000470886 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
RRP1B-202ENST00000470886 EIF4G3O43432 1585 aaKnown RBP13.29□□□□□ -0.28
RRP1B-202ENST00000470886 U2AF1L5P0DN76 240 aaPredicted RBP13.28□□□□□ -0.28
RRP1B-202ENST00000470886 SRPK2P78362 688 aaKnown RBP13.28□□□□□ -0.28
RRP1B-202ENST00000470886 U2AF1Q01081 240 aaKnown RBP eCLIP13.28□□□□□ -0.28
RRP1B-202ENST00000470886 GSE1Q14687 1217 aa13.28□□□□□ -0.28
RRP1B-202ENST00000470886 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
RRP1B-202ENST00000470886 MSNP26038 577 aaKnown RBP13.28□□□□□ -0.28
RRP1B-202ENST00000470886 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
RRP1B-202ENST00000470886 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
RRP1B-202ENST00000470886 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
RRP1B-202ENST00000470886 DNTTIP2Q5QJE6 756 aaKnown RBP13.25□□□□□ -0.29
RRP1B-202ENST00000470886 TERF2IPQ9NYB0 399 aa13.25□□□□□ -0.29
RRP1B-202ENST00000470886 NUP160Q12769 1436 aa13.25□□□□□ -0.29
RRP1B-202ENST00000470886 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
RRP1B-202ENST00000470886 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
RRP1B-202ENST00000470886 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
RRP1B-202ENST00000470886 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
RRP1B-202ENST00000470886 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
RRP1B-202ENST00000470886 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
RRP1B-202ENST00000470886 SLKQ9H2G2 1235 aaPredicted RBP13.24□□□□□ -0.29
RRP1B-202ENST00000470886 SMC4Q9NTJ3 1288 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms