RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 PTMSP20962 102 aa17.84■□□□□ 0.45
HDAC7-219ENST00000470668 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
HDAC7-219ENST00000470668 PANK3Q9H999 370 aa17.83■□□□□ 0.45
HDAC7-219ENST00000470668 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-219ENST00000470668 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
HDAC7-219ENST00000470668 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.44
HDAC7-219ENST00000470668 CHMP5Q9NZZ3 219 aa17.83■□□□□ 0.44
HDAC7-219ENST00000470668 GOLGA6L4A6NEF3 574 aa17.82■□□□□ 0.44
HDAC7-219ENST00000470668 NOL8Q76FK4 1167 aaKnown RBP17.82■□□□□ 0.44
HDAC7-219ENST00000470668 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
HDAC7-219ENST00000470668 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
HDAC7-219ENST00000470668 USP47Q96K76 1375 aa17.82■□□□□ 0.44
HDAC7-219ENST00000470668 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
HDAC7-219ENST00000470668 FOXD4L6Q3SYB3 417 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-219ENST00000470668 FOXD4L3Q6VB84 417 aaPredicted RBP17.81■□□□□ 0.44
HDAC7-219ENST00000470668 APAF1O14727 1248 aa17.81■□□□□ 0.44
HDAC7-219ENST00000470668 RBM10P98175 930 aaKnown RBP17.8■□□□□ 0.44
HDAC7-219ENST00000470668 GGT6Q6P531 493 aa17.8■□□□□ 0.44
HDAC7-219ENST00000470668 UBE2Q2Q8WVN8 375 aa17.8■□□□□ 0.44
HDAC7-219ENST00000470668 NESP48681 1621 aa17.79■□□□□ 0.44
HDAC7-219ENST00000470668 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
HDAC7-219ENST00000470668 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
HDAC7-219ENST00000470668 POGKQ9P215 609 aa17.79■□□□□ 0.44
HDAC7-219ENST00000470668 TRAK2O60296 914 aa17.78■□□□□ 0.44
HDAC7-219ENST00000470668 MRE11P49959 708 aa17.78■□□□□ 0.44
HDAC7-219ENST00000470668 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.43
HDAC7-219ENST00000470668 WDR97A6NE52 1622 aa17.76■□□□□ 0.43
HDAC7-219ENST00000470668 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
HDAC7-219ENST00000470668 PRXQ9BXM0 1461 aa17.76■□□□□ 0.43
HDAC7-219ENST00000470668 ANKRD30AQ9BXX3 1397 aa17.76■□□□□ 0.43
HDAC7-219ENST00000470668 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
HDAC7-219ENST00000470668 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
HDAC7-219ENST00000470668 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.434e-7■■■■■ 29.9
HDAC7-219ENST00000470668 KCNJ4P48050 445 aa17.75■□□□□ 0.43
HDAC7-219ENST00000470668 FGD6Q6ZV73 1430 aa17.75■□□□□ 0.43
HDAC7-219ENST00000470668 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
HDAC7-219ENST00000470668 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
HDAC7-219ENST00000470668 SKOR2Q2VWA4 1001 aaPredicted RBP17.74■□□□□ 0.43
HDAC7-219ENST00000470668 CUX1P39880 1505 aa17.73■□□□□ 0.43
HDAC7-219ENST00000470668 TNNT3P45378 269 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-219ENST00000470668 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
HDAC7-219ENST00000470668 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
HDAC7-219ENST00000470668 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
HDAC7-219ENST00000470668 MLECQ14165 292 aa17.72■□□□□ 0.43
HDAC7-219ENST00000470668 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.72■□□□□ 0.43
HDAC7-219ENST00000470668 CFTRP13569 1480 aa17.71■□□□□ 0.43
HDAC7-219ENST00000470668 MCCP23508 829 aa17.71■□□□□ 0.43
HDAC7-219ENST00000470668 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
HDAC7-219ENST00000470668 STK26Q9P289 416 aa17.71■□□□□ 0.43
HDAC7-219ENST00000470668 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
HDAC7-219ENST00000470668 KIF3BO15066 747 aa17.69■□□□□ 0.42
HDAC7-219ENST00000470668 FGD1P98174 961 aa17.69■□□□□ 0.42
HDAC7-219ENST00000470668 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
HDAC7-219ENST00000470668 E9PSI1 815 aa17.68■□□□□ 0.42
HDAC7-219ENST00000470668 NRDCO43847 1150 aa17.68■□□□□ 0.42
HDAC7-219ENST00000470668 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
HDAC7-219ENST00000470668 NAP1L2Q9ULW6 460 aaPredicted RBP17.68■□□□□ 0.42
HDAC7-219ENST00000470668 ESPNB1AK53 854 aa17.67■□□□□ 0.42
HDAC7-219ENST00000470668 ZMYND15Q9H091 742 aa17.67■□□□□ 0.42
HDAC7-219ENST00000470668 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
HDAC7-219ENST00000470668 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
HDAC7-219ENST00000470668 RRBP1Q9P2E9 1410 aaKnown RBP17.67■□□□□ 0.42
HDAC7-219ENST00000470668 ZNF771Q7L3S4 317 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-219ENST00000470668 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
HDAC7-219ENST00000470668 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
HDAC7-219ENST00000470668 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
HDAC7-219ENST00000470668 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
HDAC7-219ENST00000470668 SOX12O15370 315 aa17.66■□□□□ 0.42
HDAC7-219ENST00000470668 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
HDAC7-219ENST00000470668 SMG6Q86US8 1419 aaKnown RBP17.65■□□□□ 0.42
HDAC7-219ENST00000470668 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-219ENST00000470668 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
HDAC7-219ENST00000470668 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
HDAC7-219ENST00000470668 ELL2O00472 640 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-219ENST00000470668 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
HDAC7-219ENST00000470668 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
HDAC7-219ENST00000470668 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
HDAC7-219ENST00000470668 C11orf95C9JLR9 678 aaPredicted RBP17.64■□□□□ 0.41
HDAC7-219ENST00000470668 ST18O60284 1047 aa17.63■□□□□ 0.41
HDAC7-219ENST00000470668 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
HDAC7-219ENST00000470668 LNPKQ9C0E8 428 aa17.63■□□□□ 0.41
HDAC7-219ENST00000470668 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
HDAC7-219ENST00000470668 TPM2P07951 284 aa17.63■□□□□ 0.41
HDAC7-219ENST00000470668 SRPK2P78362 688 aaKnown RBP17.62■□□□□ 0.41
HDAC7-219ENST00000470668 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
HDAC7-219ENST00000470668 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
HDAC7-219ENST00000470668 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
HDAC7-219ENST00000470668 NCOA2Q15596 1464 aa17.62■□□□□ 0.41
HDAC7-219ENST00000470668 GRPEL1Q9HAV7 217 aa17.61■□□□□ 0.41
HDAC7-219ENST00000470668 MPNDQ8N594 471 aa17.61■□□□□ 0.41
HDAC7-219ENST00000470668 MCM4P33991 863 aa17.6■□□□□ 0.41
HDAC7-219ENST00000470668 TRIM6-TRIM34B2RNG4 842 aa17.59■□□□□ 0.41
HDAC7-219ENST00000470668 BCAR3O75815 825 aa17.59■□□□□ 0.41
HDAC7-219ENST00000470668 CSPP1Q1MSJ5 1256 aa17.58■□□□□ 0.41
HDAC7-219ENST00000470668 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.41
HDAC7-219ENST00000470668 BRD4O60885 1362 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-219ENST00000470668 CASKIN1Q8WXD9 1431 aa17.58■□□□□ 0.4
HDAC7-219ENST00000470668 C20orf194Q5TEA3 1177 aa17.58■□□□□ 0.4
HDAC7-219ENST00000470668 MAP7D2Q96T17 732 aa17.57■□□□□ 0.4
HDAC7-219ENST00000470668 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms