RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 MRPL50Q8N5N7 158 aaKnown RBP10.41□□□□□ -0.74
COL9A1-206ENST00000470652 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
COL9A1-206ENST00000470652 WNT2BQ93097 391 aa10.4□□□□□ -0.74
COL9A1-206ENST00000470652 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
COL9A1-206ENST00000470652 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
COL9A1-206ENST00000470652 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
COL9A1-206ENST00000470652 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
COL9A1-206ENST00000470652 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
COL9A1-206ENST00000470652 NBPF3Q9H094 633 aa10.35□□□□□ -0.75
COL9A1-206ENST00000470652 DPYSL4O14531 572 aa10.34□□□□□ -0.75
COL9A1-206ENST00000470652 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
COL9A1-206ENST00000470652 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
COL9A1-206ENST00000470652 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
COL9A1-206ENST00000470652 PCDHGA10Q9Y5H3 936 aa10.32□□□□□ -0.76
COL9A1-206ENST00000470652 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
COL9A1-206ENST00000470652 PPP1R3GB7ZBB8 358 aa10.29□□□□□ -0.76
COL9A1-206ENST00000470652 COL9A1P20849 921 aa10.29□□□□□ -0.76
COL9A1-206ENST00000470652 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
COL9A1-206ENST00000470652 RABGEF1Q9UJ41 708 aa10.29□□□□□ -0.76
COL9A1-206ENST00000470652 RGS20O76081 388 aa10.28□□□□□ -0.76
COL9A1-206ENST00000470652 PDIA6Q15084 440 aa10.28□□□□□ -0.76
COL9A1-206ENST00000470652 A0A0G2JS52 829 aa10.26□□□□□ -0.77
COL9A1-206ENST00000470652 PHF14O94880 888 aa10.26□□□□□ -0.77
COL9A1-206ENST00000470652 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
COL9A1-206ENST00000470652 FBXW7Q969H0 707 aa10.26□□□□□ -0.77
COL9A1-206ENST00000470652 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
COL9A1-206ENST00000470652 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
COL9A1-206ENST00000470652 KIAA1468Q9P260 1216 aa10.23□□□□□ -0.77
COL9A1-206ENST00000470652 BCAMP50895 628 aa10.22□□□□□ -0.77
COL9A1-206ENST00000470652 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
COL9A1-206ENST00000470652 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
COL9A1-206ENST00000470652 ZFRQ96KR1 1074 aaKnown RBP10.19□□□□□ -0.78
COL9A1-206ENST00000470652 EPAS1Q99814 870 aa10.19□□□□□ -0.78
COL9A1-206ENST00000470652 SOWAHBA6NEL2 793 aa10.18□□□□□ -0.78
COL9A1-206ENST00000470652 DDX12PQ92771 950 aa10.17□□□□□ -0.78
COL9A1-206ENST00000470652 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
COL9A1-206ENST00000470652 SEPT9Q9UHD8 586 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-206ENST00000470652 ONECUT3O60422 494 aaPredicted RBP10.16□□□□□ -0.78
COL9A1-206ENST00000470652 ITGBL1O95965 494 aaPredicted RBP10.16□□□□□ -0.78
COL9A1-206ENST00000470652 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
COL9A1-206ENST00000470652 GRXCR2A6NFK2 248 aa10.14□□□□□ -0.79
COL9A1-206ENST00000470652 SEMA3EO15041 775 aa10.14□□□□□ -0.79
COL9A1-206ENST00000470652 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
COL9A1-206ENST00000470652 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
COL9A1-206ENST00000470652 NBR1Q14596 966 aa10.12□□□□□ -0.79
COL9A1-206ENST00000470652 KCNC4Q03721 635 aa10.11□□□□□ -0.79
COL9A1-206ENST00000470652 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-206ENST00000470652 FAM98CQ17RN3 349 aaKnown RBP10.1□□□□□ -0.79
COL9A1-206ENST00000470652 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
COL9A1-206ENST00000470652 TESPA1A2RU30 521 aaPredicted RBP10.09□□□□□ -0.79
COL9A1-206ENST00000470652 OSBPP22059 807 aa10.09□□□□□ -0.79
COL9A1-206ENST00000470652 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.09□□□□□ -0.79
COL9A1-206ENST00000470652 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
COL9A1-206ENST00000470652 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
COL9A1-206ENST00000470652 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
COL9A1-206ENST00000470652 EN1Q05925 392 aaPredicted RBP10.07□□□□□ -0.8
COL9A1-206ENST00000470652 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
COL9A1-206ENST00000470652 MAP3K7O43318 606 aa10.06□□□□□ -0.8
COL9A1-206ENST00000470652 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
COL9A1-206ENST00000470652 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
COL9A1-206ENST00000470652 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
COL9A1-206ENST00000470652 Q6ZNB5 142 aa10.03□□□□□ -0.8
COL9A1-206ENST00000470652 PPP4CP60510 307 aa10.02□□□□□ -0.81
COL9A1-206ENST00000470652 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
COL9A1-206ENST00000470652 SMAPO00193 183 aa10□□□□□ -0.81
COL9A1-206ENST00000470652 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
COL9A1-206ENST00000470652 CDCA7LQ96GN5 454 aa9.99□□□□□ -0.81
COL9A1-206ENST00000470652 SAMD7Q7Z3H4 446 aa9.98□□□□□ -0.81
COL9A1-206ENST00000470652 BCANQ96GW7 911 aa9.98□□□□□ -0.81
COL9A1-206ENST00000470652 PRSS12P56730 875 aa9.97□□□□□ -0.81
COL9A1-206ENST00000470652 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
COL9A1-206ENST00000470652 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
COL9A1-206ENST00000470652 FAM198AQ9UFP1 575 aa9.95□□□□□ -0.82
COL9A1-206ENST00000470652 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
COL9A1-206ENST00000470652 TATDN2Q93075 761 aa9.94□□□□□ -0.82
COL9A1-206ENST00000470652 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
COL9A1-206ENST00000470652 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
COL9A1-206ENST00000470652 CDHR5Q9HBB8 845 aa9.93□□□□□ -0.82
COL9A1-206ENST00000470652 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
COL9A1-206ENST00000470652 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
COL9A1-206ENST00000470652 GFRA3O60609 400 aa9.92□□□□□ -0.82
COL9A1-206ENST00000470652 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
COL9A1-206ENST00000470652 PTGDRQ13258 359 aa9.91□□□□□ -0.82
COL9A1-206ENST00000470652 LAPTM4AQ15012 233 aa9.91□□□□□ -0.82
COL9A1-206ENST00000470652 NBPF26B4DH59 902 aa9.9□□□□□ -0.82
COL9A1-206ENST00000470652 FCHSD2O94868 740 aa9.9□□□□□ -0.82
COL9A1-206ENST00000470652 MTRQ99707 1265 aa9.9□□□□□ -0.82
COL9A1-206ENST00000470652 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
COL9A1-206ENST00000470652 RNF40O75150 1001 aa9.89□□□□□ -0.83
COL9A1-206ENST00000470652 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
COL9A1-206ENST00000470652 GPIHBP1Q8IV16 184 aa9.89□□□□□ -0.83
COL9A1-206ENST00000470652 PRKD2Q9BZL6 878 aa9.89□□□□□ -0.83
COL9A1-206ENST00000470652 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
COL9A1-206ENST00000470652 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
COL9A1-206ENST00000470652 HIC1Q14526 733 aa9.87□□□□□ -0.83
COL9A1-206ENST00000470652 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
COL9A1-206ENST00000470652 ZNF516Q92618 1163 aa9.86□□□□□ -0.83
COL9A1-206ENST00000470652 TRAF7Q6Q0C0 670 aa9.85□□□□□ -0.83
COL9A1-206ENST00000470652 APLP1P51693 650 aa9.84□□□□□ -0.83
COL9A1-206ENST00000470652 TTC13Q8NBP0 860 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms