RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PHF14O94880 888 aa13.32□□□□□ -0.28
SSB-209ENST00000470621 OSBPP22059 807 aa13.32□□□□□ -0.28
SSB-209ENST00000470621 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
SSB-209ENST00000470621 PSEN2P49810 448 aa13.31□□□□□ -0.28
SSB-209ENST00000470621 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
SSB-209ENST00000470621 HRO43593 1189 aa13.28□□□□□ -0.28
SSB-209ENST00000470621 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
SSB-209ENST00000470621 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
SSB-209ENST00000470621 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
SSB-209ENST00000470621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSB-209ENST00000470621 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
SSB-209ENST00000470621 EPAS1Q99814 870 aa13.26□□□□□ -0.29
SSB-209ENST00000470621 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
SSB-209ENST00000470621 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
SSB-209ENST00000470621 PLA2G2EQ9NZK7 142 aa13.25□□□□□ -0.29
SSB-209ENST00000470621 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
SSB-209ENST00000470621 SMYD5Q6GMV2 418 aa13.24□□□□□ -0.29
SSB-209ENST00000470621 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
SSB-209ENST00000470621 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
SSB-209ENST00000470621 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
SSB-209ENST00000470621 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
SSB-209ENST00000470621 MAP3K7O43318 606 aa13.21□□□□□ -0.29
SSB-209ENST00000470621 KCNK17Q96T54 332 aa13.21□□□□□ -0.29
SSB-209ENST00000470621 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
SSB-209ENST00000470621 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
SSB-209ENST00000470621 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
SSB-209ENST00000470621 C6orf132Q5T0Z8 1188 aa13.16□□□□□ -0.3
SSB-209ENST00000470621 KCTD12Q96CX2 325 aaKnown RBP13.16□□□□□ -0.3
SSB-209ENST00000470621 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
SSB-209ENST00000470621 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
SSB-209ENST00000470621 GPR37O15354 613 aa13.14□□□□□ -0.31
SSB-209ENST00000470621 COL9A1P20849 921 aa13.14□□□□□ -0.31
SSB-209ENST00000470621 GPIHBP1Q8IV16 184 aa13.14□□□□□ -0.31
SSB-209ENST00000470621 PTPREP23469 700 aa13.12□□□□□ -0.31
SSB-209ENST00000470621 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
SSB-209ENST00000470621 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
SSB-209ENST00000470621 PTGDRQ13258 359 aa13.09□□□□□ -0.31
SSB-209ENST00000470621 PPP1R3GB7ZBB8 358 aa13.07□□□□□ -0.32
SSB-209ENST00000470621 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
SSB-209ENST00000470621 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
SSB-209ENST00000470621 FCHSD2O94868 740 aa13.03□□□□□ -0.32
SSB-209ENST00000470621 FECHP22830 423 aa13.03□□□□□ -0.32
SSB-209ENST00000470621 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
SSB-209ENST00000470621 ZBED2Q9BTP6 218 aa13.03□□□□□ -0.32
SSB-209ENST00000470621 PTPN5P54829 565 aa13.01□□□□□ -0.33
SSB-209ENST00000470621 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
SSB-209ENST00000470621 PADI6Q6TGC4 694 aa13□□□□□ -0.33
SSB-209ENST00000470621 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
SSB-209ENST00000470621 HIC1Q14526 733 aa12.99□□□□□ -0.33
SSB-209ENST00000470621 CDCA7LQ96GN5 454 aa12.99□□□□□ -0.33
SSB-209ENST00000470621 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
SSB-209ENST00000470621 GNPATO15228 680 aa12.98□□□□□ -0.33
SSB-209ENST00000470621 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
SSB-209ENST00000470621 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
SSB-209ENST00000470621 ZMYND10O75800 440 aa12.97□□□□□ -0.33
SSB-209ENST00000470621 PRSS12P56730 875 aa12.97□□□□□ -0.33
SSB-209ENST00000470621 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
SSB-209ENST00000470621 MRPL50Q8N5N7 158 aaKnown RBP12.96□□□□□ -0.33
SSB-209ENST00000470621 GOLGA8CPA6NN73 597 aa12.95□□□□□ -0.34
SSB-209ENST00000470621 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
SSB-209ENST00000470621 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
SSB-209ENST00000470621 TTC13Q8NBP0 860 aa12.95□□□□□ -0.34
SSB-209ENST00000470621 WNT2BQ93097 391 aa12.94□□□□□ -0.34
SSB-209ENST00000470621 NBPF3Q9H094 633 aa12.94□□□□□ -0.34
SSB-209ENST00000470621 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
SSB-209ENST00000470621 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
SSB-209ENST00000470621 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
SSB-209ENST00000470621 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
SSB-209ENST00000470621 KIAA1468Q9P260 1216 aa12.9□□□□□ -0.34
SSB-209ENST00000470621 SMAPO00193 183 aa12.88□□□□□ -0.35
SSB-209ENST00000470621 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
SSB-209ENST00000470621 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
SSB-209ENST00000470621 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
SSB-209ENST00000470621 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
SSB-209ENST00000470621 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
SSB-209ENST00000470621 RGS20O76081 388 aa12.85□□□□□ -0.35
SSB-209ENST00000470621 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
SSB-209ENST00000470621 CCDC102AQ96A19 550 aa12.85□□□□□ -0.35
SSB-209ENST00000470621 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
SSB-209ENST00000470621 PACS2Q86VP3 889 aa12.84□□□□□ -0.35
SSB-209ENST00000470621 KRI1Q8N9T8 703 aaKnown RBP12.84□□□□□ -0.35
SSB-209ENST00000470621 TATDN2Q93075 761 aa12.84□□□□□ -0.35
SSB-209ENST00000470621 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
SSB-209ENST00000470621 IRF6O14896 467 aa12.83□□□□□ -0.36
SSB-209ENST00000470621 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
SSB-209ENST00000470621 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
SSB-209ENST00000470621 A0A0G2JS52 829 aa12.81□□□□□ -0.36
SSB-209ENST00000470621 PHOX2BQ99453 314 aa12.81□□□□□ -0.36
SSB-209ENST00000470621 METTL3Q86U44 580 aaKnown RBP12.8□□□□□ -0.36
SSB-209ENST00000470621 ANKK1Q8NFD2 765 aa12.8□□□□□ -0.36
SSB-209ENST00000470621 EYA1Q99502 592 aa12.8□□□□□ -0.36
SSB-209ENST00000470621 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
SSB-209ENST00000470621 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
SSB-209ENST00000470621 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
SSB-209ENST00000470621 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
SSB-209ENST00000470621 OATP04181 439 aa12.74□□□□□ -0.37
SSB-209ENST00000470621 AK7Q96M32 723 aa12.74□□□□□ -0.37
SSB-209ENST00000470621 TRIM66O15016 1216 aa12.73□□□□□ -0.37
SSB-209ENST00000470621 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
SSB-209ENST00000470621 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms