RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
VAMP3-202ENST00000470357 FBXO41Q8TF61 875 aa10.41□□□□□ -0.74
VAMP3-202ENST00000470357 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
VAMP3-202ENST00000470357 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.75
VAMP3-202ENST00000470357 IRX5P78411 483 aaPredicted RBP10.39□□□□□ -0.75
VAMP3-202ENST00000470357 VPS8Q8N3P4 1428 aa10.39□□□□□ -0.75
VAMP3-202ENST00000470357 HS6ST3Q8IZP7 471 aa10.38□□□□□ -0.75
VAMP3-202ENST00000470357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.38□□□□□ -0.75
VAMP3-202ENST00000470357 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
VAMP3-202ENST00000470357 WDR7Q9Y4E6 1490 aa10.37□□□□□ -0.75
VAMP3-202ENST00000470357 POTEB2H3BUK9 544 aa10.37□□□□□ -0.75
VAMP3-202ENST00000470357 PLCG2P16885 1265 aa10.37□□□□□ -0.75
VAMP3-202ENST00000470357 RANGAP1P46060 587 aaPredicted RBP10.37□□□□□ -0.75
VAMP3-202ENST00000470357 OCEL1Q9H607 264 aa10.37□□□□□ -0.75
VAMP3-202ENST00000470357 FMN1Q68DA7 1419 aa10.36□□□□□ -0.75
VAMP3-202ENST00000470357 CD109Q6YHK3 1445 aa10.36□□□□□ -0.75
VAMP3-202ENST00000470357 LHX8Q68G74 356 aa10.35□□□□□ -0.75
VAMP3-202ENST00000470357 KIAA0556O60303 1618 aa10.35□□□□□ -0.75
VAMP3-202ENST00000470357 SOX12O15370 315 aa10.34□□□□□ -0.75
VAMP3-202ENST00000470357 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
VAMP3-202ENST00000470357 PDCD7Q8N8D1 485 aaKnown RBP10.32□□□□□ -0.76
VAMP3-202ENST00000470357 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
VAMP3-202ENST00000470357 FHOD3Q2V2M9 1422 aa10.32□□□□□ -0.76
VAMP3-202ENST00000470357 FYCO1Q9BQS8 1478 aa10.31□□□□□ -0.76
VAMP3-202ENST00000470357 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
VAMP3-202ENST00000470357 ARAP3Q8WWN8 1544 aa10.31□□□□□ -0.76
VAMP3-202ENST00000470357 CFAP43Q8NDM7 1665 aa10.31□□□□□ -0.76
VAMP3-202ENST00000470357 ABCA8O94911 1581 aa10.31□□□□□ -0.76
VAMP3-202ENST00000470357 PTPRMP28827 1452 aa10.3□□□□□ -0.76
VAMP3-202ENST00000470357 POTEJP0CG39 1038 aa10.3□□□□□ -0.76
VAMP3-202ENST00000470357 MFRPQ9BY79 579 aa10.3□□□□□ -0.76
VAMP3-202ENST00000470357 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
VAMP3-202ENST00000470357 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
VAMP3-202ENST00000470357 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
VAMP3-202ENST00000470357 PCF11O94913 1555 aaKnown RBP10.28□□□□□ -0.76
VAMP3-202ENST00000470357 NLRP6P59044 892 aa10.28□□□□□ -0.76
VAMP3-202ENST00000470357 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
VAMP3-202ENST00000470357 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
VAMP3-202ENST00000470357 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
VAMP3-202ENST00000470357 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
VAMP3-202ENST00000470357 MS4A4AQ96JQ5 239 aa10.27□□□□□ -0.77
VAMP3-202ENST00000470357 RAPGEF6Q8TEU7 1601 aa10.25□□□□□ -0.77
VAMP3-202ENST00000470357 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
VAMP3-202ENST00000470357 LMTK3Q96Q04 1460 aa10.25□□□□□ -0.77
VAMP3-202ENST00000470357 RAPGEF3O95398 923 aa10.25□□□□□ -0.77
VAMP3-202ENST00000470357 TIAM1Q13009 1591 aa10.24□□□□□ -0.77
VAMP3-202ENST00000470357 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
VAMP3-202ENST00000470357 ATP10BO94823 1461 aa10.23□□□□□ -0.77
VAMP3-202ENST00000470357 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
VAMP3-202ENST00000470357 OTUD5Q96G74 571 aa10.21□□□□□ -0.77
VAMP3-202ENST00000470357 BCORL1Q5H9F3 1711 aa10.21□□□□□ -0.78
VAMP3-202ENST00000470357 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
VAMP3-202ENST00000470357 ABCA9Q8IUA7 1624 aa10.2□□□□□ -0.78
VAMP3-202ENST00000470357 MADDQ8WXG6 1647 aa10.2□□□□□ -0.78
VAMP3-202ENST00000470357 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
VAMP3-202ENST00000470357 LRRIQ1Q96JM4 1722 aa10.2□□□□□ -0.78
VAMP3-202ENST00000470357 NEO1Q92859 1461 aa10.19□□□□□ -0.78
VAMP3-202ENST00000470357 ARID3CA6NKF2 412 aa10.19□□□□□ -0.78
VAMP3-202ENST00000470357 HSPA2P54652 639 aa10.19□□□□□ -0.78
VAMP3-202ENST00000470357 MAMSTRQ6ZN01 415 aa10.19□□□□□ -0.78
VAMP3-202ENST00000470357 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
VAMP3-202ENST00000470357 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
VAMP3-202ENST00000470357 G3V3G9 751 aa10.18□□□□□ -0.78
VAMP3-202ENST00000470357 PPP1R37O75864 691 aa10.18□□□□□ -0.78
VAMP3-202ENST00000470357 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
VAMP3-202ENST00000470357 SCUBE2Q9NQ36 999 aa10.17□□□□□ -0.78
VAMP3-202ENST00000470357 CDK11AQ9UQ88 783 aaPredicted RBP10.17□□□□□ -0.78
VAMP3-202ENST00000470357 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
VAMP3-202ENST00000470357 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
VAMP3-202ENST00000470357 ARID4BQ4LE39 1312 aaPredicted RBP10.16□□□□□ -0.78
VAMP3-202ENST00000470357 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
VAMP3-202ENST00000470357 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
VAMP3-202ENST00000470357 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
VAMP3-202ENST00000470357 MTUS2Q5JR59 1369 aa10.15□□□□□ -0.78
VAMP3-202ENST00000470357 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
VAMP3-202ENST00000470357 SUPT6HQ7KZ85 1726 aaKnown RBP10.15□□□□□ -0.78
VAMP3-202ENST00000470357 SLC24A1O60721 1099 aa10.14□□□□□ -0.79
VAMP3-202ENST00000470357 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
VAMP3-202ENST00000470357 TMEM121BQ9BXQ6 578 aaPredicted RBP10.13□□□□□ -0.79
VAMP3-202ENST00000470357 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
VAMP3-202ENST00000470357 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
VAMP3-202ENST00000470357 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
VAMP3-202ENST00000470357 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
VAMP3-202ENST00000470357 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
VAMP3-202ENST00000470357 RIMS1Q86UR5 1692 aaKnown RBP10.12□□□□□ -0.79
VAMP3-202ENST00000470357 SOCS7O14512 581 aa10.12□□□□□ -0.79
VAMP3-202ENST00000470357 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
VAMP3-202ENST00000470357 SIGLEC1Q9BZZ2 1709 aa10.12□□□□□ -0.79
VAMP3-202ENST00000470357 DENND4BO75064 1496 aaPredicted RBP10.11□□□□□ -0.79
VAMP3-202ENST00000470357 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
VAMP3-202ENST00000470357 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
VAMP3-202ENST00000470357 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
VAMP3-202ENST00000470357 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
VAMP3-202ENST00000470357 TROQ12816 1431 aaPredicted RBP10.09□□□□□ -0.79
VAMP3-202ENST00000470357 YEATS2Q9ULM3 1422 aa10.09□□□□□ -0.79
VAMP3-202ENST00000470357 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
VAMP3-202ENST00000470357 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
VAMP3-202ENST00000470357 SLAIN1Q8ND83 568 aa10.09□□□□□ -0.79
VAMP3-202ENST00000470357 KIF14Q15058 1648 aa10.08□□□□□ -0.8
VAMP3-202ENST00000470357 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms