RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.09□□□□□ -1.11
GCFC2-205ENST00000470197 KIF3CO14782 793 aa8.08□□□□□ -1.12
GCFC2-205ENST00000470197 TMEM92Q6UXU6 159 aa8.08□□□□□ -1.12
GCFC2-205ENST00000470197 MS4A3Q96HJ5 214 aa8.08□□□□□ -1.12
GCFC2-205ENST00000470197 RBM25P49756 843 aaKnown RBP8.08□□□□□ -1.12
GCFC2-205ENST00000470197 FCHSD2O94868 740 aa8.07□□□□□ -1.12
GCFC2-205ENST00000470197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.125e-7■■■■□ 22
GCFC2-205ENST00000470197 BEGAINQ9BUH8 593 aa8.06□□□□□ -1.12
GCFC2-205ENST00000470197 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
GCFC2-205ENST00000470197 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
GCFC2-205ENST00000470197 SSTR3P32745 418 aaPredicted RBP8.04□□□□□ -1.12
GCFC2-205ENST00000470197 CCDC97Q96F63 343 aaPredicted RBP8.04□□□□□ -1.12
GCFC2-205ENST00000470197 ZRANB1Q9UGI0 708 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 SERPINA10Q9UK55 444 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 TTLL13PA6NNM8 815 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 SKIV2LQ15477 1246 aaKnown RBP8.04□□□□□ -1.12
GCFC2-205ENST00000470197 TMCO4Q5TGY1 634 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 FXR2P51116 673 aaKnown RBP eCLIP8.04□□□□□ -1.12
GCFC2-205ENST00000470197 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
GCFC2-205ENST00000470197 MTMR14Q8NCE2 650 aa8.03□□□□□ -1.12
GCFC2-205ENST00000470197 TSR1Q2NL82 804 aaKnown RBP8.02□□□□□ -1.13
GCFC2-205ENST00000470197 ADAMTS19Q8TE59 1207 aa8.02□□□□□ -1.13
GCFC2-205ENST00000470197 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
GCFC2-205ENST00000470197 LIMD1Q9UGP4 676 aa8.01□□□□□ -1.13
GCFC2-205ENST00000470197 PTGER2P43116 358 aa8□□□□□ -1.13
GCFC2-205ENST00000470197 RFC5P40937 340 aa7.99□□□□□ -1.13
GCFC2-205ENST00000470197 TMC2Q8TDI7 906 aa7.99□□□□□ -1.13
GCFC2-205ENST00000470197 GPCPD1Q9NPB8 672 aa7.99□□□□□ -1.13
GCFC2-205ENST00000470197 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
GCFC2-205ENST00000470197 TBC1D12O60347 775 aa7.99□□□□□ -1.13
GCFC2-205ENST00000470197 FAM217BQ9NTX9 383 aaPredicted RBP7.99□□□□□ -1.13
GCFC2-205ENST00000470197 BMP2KQ9NSY1 1161 aaPredicted RBP7.98□□□□□ -1.13
GCFC2-205ENST00000470197 TRIM35Q9UPQ4 493 aa7.97□□□□□ -1.13
GCFC2-205ENST00000470197 GLMNQ92990 594 aa7.97□□□□□ -1.13
GCFC2-205ENST00000470197 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
GCFC2-205ENST00000470197 SPDYE5A6NIY4 337 aa7.97□□□□□ -1.13
GCFC2-205ENST00000470197 CD44P16070 742 aaKnown RBP7.97□□□□□ -1.13
GCFC2-205ENST00000470197 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.13
GCFC2-205ENST00000470197 PAK3O75914 559 aaPredicted RBP7.96□□□□□ -1.14
GCFC2-205ENST00000470197 PIP4P2Q8N4L2 257 aa7.96□□□□□ -1.14
GCFC2-205ENST00000470197 TMEM121BQ9BXQ6 578 aaPredicted RBP7.96□□□□□ -1.14
GCFC2-205ENST00000470197 EVI5O60447 810 aa7.95□□□□□ -1.14
GCFC2-205ENST00000470197 GPR37L1O60883 481 aa7.95□□□□□ -1.14
GCFC2-205ENST00000470197 RFX1P22670 979 aa7.95□□□□□ -1.14
GCFC2-205ENST00000470197 QPCTQ16769 361 aa7.95□□□□□ -1.14
GCFC2-205ENST00000470197 METTL3Q86U44 580 aaKnown RBP7.95□□□□□ -1.14
GCFC2-205ENST00000470197 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
GCFC2-205ENST00000470197 CLCN1P35523 988 aa7.94□□□□□ -1.14
GCFC2-205ENST00000470197 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
GCFC2-205ENST00000470197 SRPK2P78362 688 aaKnown RBP7.93□□□□□ -1.14
GCFC2-205ENST00000470197 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
GCFC2-205ENST00000470197 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
GCFC2-205ENST00000470197 ABL2P42684 1182 aa7.92□□□□□ -1.14
GCFC2-205ENST00000470197 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
GCFC2-205ENST00000470197 UNCXA6NJT0 531 aa7.91□□□□□ -1.14
GCFC2-205ENST00000470197 CFAP70Q5T0N1 1121 aa7.91□□□□□ -1.14
GCFC2-205ENST00000470197 EN1Q05925 392 aaPredicted RBP7.9□□□□□ -1.14
GCFC2-205ENST00000470197 GALR2O43603 387 aaPredicted RBP7.9□□□□□ -1.15
GCFC2-205ENST00000470197 CSPP1Q1MSJ5 1256 aa7.9□□□□□ -1.15
GCFC2-205ENST00000470197 MAP3K7O43318 606 aa7.88□□□□□ -1.15
GCFC2-205ENST00000470197 PCDHGA10Q9Y5H3 936 aa7.88□□□□□ -1.15
GCFC2-205ENST00000470197 C3orf80F5H4A9 247 aa7.88□□□□□ -1.15
GCFC2-205ENST00000470197 IRX5P78411 483 aaPredicted RBP7.88□□□□□ -1.15
GCFC2-205ENST00000470197 BOLA1Q9Y3E2 137 aa7.88□□□□□ -1.15
GCFC2-205ENST00000470197 PCDHB15Q9Y5E8 787 aa7.88□□□□□ -1.15
GCFC2-205ENST00000470197 PXYLP1Q8TE99 480 aa7.87□□□□□ -1.15
GCFC2-205ENST00000470197 HMX1Q9NP08 348 aaPredicted RBP7.86□□□□□ -1.15
GCFC2-205ENST00000470197 PADI6Q6TGC4 694 aa7.86□□□□□ -1.15
GCFC2-205ENST00000470197 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
GCFC2-205ENST00000470197 GJD4Q96KN9 370 aaPredicted RBP7.86□□□□□ -1.15
GCFC2-205ENST00000470197 PPP2R2DQ66LE6 453 aa7.85□□□□□ -1.15
GCFC2-205ENST00000470197 TIE1P35590 1138 aa7.85□□□□□ -1.15
GCFC2-205ENST00000470197 ATN1P54259 1190 aaPredicted RBP7.85□□□□□ -1.15
GCFC2-205ENST00000470197 IVNS1ABPQ9Y6Y0 642 aa7.85□□□□□ -1.15
GCFC2-205ENST00000470197 HDGFL1Q5TGJ6 251 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 SPIRE2Q8WWL2 714 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 NDUFV2P19404 249 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 CDCA8Q53HL2 280 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 UCN2Q96RP3 112 aa7.84□□□□□ -1.15
GCFC2-205ENST00000470197 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
GCFC2-205ENST00000470197 BANK1Q8NDB2 785 aa7.83□□□□□ -1.16
GCFC2-205ENST00000470197 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
GCFC2-205ENST00000470197 TMEM88BA6NKF7 163 aa7.82□□□□□ -1.16
GCFC2-205ENST00000470197 RIC3Q7Z5B4 369 aa7.82□□□□□ -1.16
GCFC2-205ENST00000470197 EPS8L1Q8TE68 723 aa7.82□□□□□ -1.16
GCFC2-205ENST00000470197 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
GCFC2-205ENST00000470197 NOM1Q5C9Z4 860 aaKnown RBP7.82□□□□□ -1.16
GCFC2-205ENST00000470197 CABLES1Q8TDN4 633 aa7.82□□□□□ -1.16
GCFC2-205ENST00000470197 PPP1R15AO75807 674 aaPredicted RBP7.81□□□□□ -1.16
GCFC2-205ENST00000470197 FAM198AQ9UFP1 575 aa7.81□□□□□ -1.16
GCFC2-205ENST00000470197 E9PSI1 815 aa7.8□□□□□ -1.16
GCFC2-205ENST00000470197 BRD1O95696 1058 aa7.8□□□□□ -1.16
GCFC2-205ENST00000470197 VAC14Q08AM6 782 aa7.8□□□□□ -1.16
GCFC2-205ENST00000470197 AP1G2O75843 785 aa7.79□□□□□ -1.16
GCFC2-205ENST00000470197 HLA-CQ95604 372 aa7.79□□□□□ -1.16
GCFC2-205ENST00000470197 CHRDL2Q6WN34 429 aa7.79□□□□□ -1.16
GCFC2-205ENST00000470197 SHROOM4Q9ULL8 1493 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms