RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
LINC00173-201ENST00000470091 TNRQ92752 1358 aa21.09■□□□□ 0.97
LINC00173-201ENST00000470091 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
LINC00173-201ENST00000470091 PLA2R1Q13018 1463 aa21.06■□□□□ 0.96
LINC00173-201ENST00000470091 UBAP1LF5GYI3 381 aa21.05■□□□□ 0.96
LINC00173-201ENST00000470091 APLP2Q06481 763 aa21.05■□□□□ 0.96
LINC00173-201ENST00000470091 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
LINC00173-201ENST00000470091 TCOF1Q13428 1488 aaKnown RBP21.04■□□□□ 0.96
LINC00173-201ENST00000470091 ZNF142P52746 1687 aaPredicted RBP21.03■□□□□ 0.96
LINC00173-201ENST00000470091 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
LINC00173-201ENST00000470091 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
LINC00173-201ENST00000470091 PZPP20742 1482 aa21.01■□□□□ 0.95
LINC00173-201ENST00000470091 DNMT1P26358 1616 aaKnown RBP21.01■□□□□ 0.95
LINC00173-201ENST00000470091 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
LINC00173-201ENST00000470091 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
LINC00173-201ENST00000470091 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
LINC00173-201ENST00000470091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
LINC00173-201ENST00000470091 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
LINC00173-201ENST00000470091 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
LINC00173-201ENST00000470091 IQSEC2Q5JU85 1478 aa20.97■□□□□ 0.95
LINC00173-201ENST00000470091 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
LINC00173-201ENST00000470091 ILDR2Q71H61 639 aa20.95■□□□□ 0.94
LINC00173-201ENST00000470091 PPARGC1BQ86YN6 1023 aaKnown RBP20.95■□□□□ 0.94
LINC00173-201ENST00000470091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
LINC00173-201ENST00000470091 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
LINC00173-201ENST00000470091 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
LINC00173-201ENST00000470091 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
LINC00173-201ENST00000470091 MAST1Q9Y2H9 1570 aa20.92■□□□□ 0.94
LINC00173-201ENST00000470091 ABCC3O15438 1527 aa20.91■□□□□ 0.94
LINC00173-201ENST00000470091 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
LINC00173-201ENST00000470091 NLRP1Q9C000 1473 aa20.91■□□□□ 0.94
LINC00173-201ENST00000470091 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
LINC00173-201ENST00000470091 ABCC5O15440 1437 aa20.89■□□□□ 0.94
LINC00173-201ENST00000470091 KIF15Q9NS87 1388 aa20.89■□□□□ 0.93
LINC00173-201ENST00000470091 CFAP65Q6ZU64 1925 aaKnown RBP20.88■□□□□ 0.93
LINC00173-201ENST00000470091 RNF17Q9BXT8 1623 aaKnown RBP20.88■□□□□ 0.93
LINC00173-201ENST00000470091 NEURL4Q96JN8 1562 aa20.87■□□□□ 0.93
LINC00173-201ENST00000470091 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
LINC00173-201ENST00000470091 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
LINC00173-201ENST00000470091 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
LINC00173-201ENST00000470091 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
LINC00173-201ENST00000470091 TOM1O60784 492 aa20.85■□□□□ 0.93
LINC00173-201ENST00000470091 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
LINC00173-201ENST00000470091 PTPN23Q9H3S7 1636 aa20.83■□□□□ 0.93
LINC00173-201ENST00000470091 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
LINC00173-201ENST00000470091 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
LINC00173-201ENST00000470091 DAPK1P53355 1430 aa20.82■□□□□ 0.92
LINC00173-201ENST00000470091 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
LINC00173-201ENST00000470091 CEP152O94986 1710 aa20.81■□□□□ 0.92
LINC00173-201ENST00000470091 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
LINC00173-201ENST00000470091 HSPA1LP34931 641 aa20.81■□□□□ 0.92
LINC00173-201ENST00000470091 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
LINC00173-201ENST00000470091 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
LINC00173-201ENST00000470091 CPS1P31327 1500 aa20.8■□□□□ 0.92
LINC00173-201ENST00000470091 MED14O60244 1454 aa20.8■□□□□ 0.92
LINC00173-201ENST00000470091 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
LINC00173-201ENST00000470091 LTKP29376 864 aa20.79■□□□□ 0.92
LINC00173-201ENST00000470091 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
LINC00173-201ENST00000470091 KANK1Q14678 1352 aa20.78■□□□□ 0.92
LINC00173-201ENST00000470091 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
LINC00173-201ENST00000470091 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LINC00173-201ENST00000470091 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
LINC00173-201ENST00000470091 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
LINC00173-201ENST00000470091 SOCS7O14512 581 aa20.77■□□□□ 0.92
LINC00173-201ENST00000470091 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
LINC00173-201ENST00000470091 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
LINC00173-201ENST00000470091 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
LINC00173-201ENST00000470091 ARHGAP31Q2M1Z3 1444 aa20.74■□□□□ 0.91
LINC00173-201ENST00000470091 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
LINC00173-201ENST00000470091 IQGAP1P46940 1657 aa20.73■□□□□ 0.91
LINC00173-201ENST00000470091 IDI1Q13907 227 aa20.73■□□□□ 0.91
LINC00173-201ENST00000470091 SCAF11Q99590 1463 aaKnown RBP20.71■□□□□ 0.91
LINC00173-201ENST00000470091 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
LINC00173-201ENST00000470091 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
LINC00173-201ENST00000470091 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
LINC00173-201ENST00000470091 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
LINC00173-201ENST00000470091 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
LINC00173-201ENST00000470091 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
LINC00173-201ENST00000470091 STRCP1A6NGW2 1772 aa20.66■□□□□ 0.9
LINC00173-201ENST00000470091 BCANQ96GW7 911 aa20.65■□□□□ 0.9
LINC00173-201ENST00000470091 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
LINC00173-201ENST00000470091 SLIT1O75093 1534 aa20.64■□□□□ 0.9
LINC00173-201ENST00000470091 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
LINC00173-201ENST00000470091 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
LINC00173-201ENST00000470091 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
LINC00173-201ENST00000470091 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
LINC00173-201ENST00000470091 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
LINC00173-201ENST00000470091 ITGAEP38570 1179 aa20.6■□□□□ 0.89
LINC00173-201ENST00000470091 RBM33Q96EV2 1170 aaKnown RBP20.6■□□□□ 0.89
LINC00173-201ENST00000470091 ADGRL2O95490 1459 aa20.6■□□□□ 0.89
LINC00173-201ENST00000470091 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.89
LINC00173-201ENST00000470091 PROSER2Q86WR7 435 aaPredicted RBP20.58■□□□□ 0.89
LINC00173-201ENST00000470091 NOS1P29475 1434 aa20.58■□□□□ 0.88
LINC00173-201ENST00000470091 SYNMO15061 1565 aa20.57■□□□□ 0.88
LINC00173-201ENST00000470091 CHGAP10645 457 aaKnown RBP20.57■□□□□ 0.88
LINC00173-201ENST00000470091 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
LINC00173-201ENST00000470091 KCNA6P17658 529 aa20.56■□□□□ 0.88
LINC00173-201ENST00000470091 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
LINC00173-201ENST00000470091 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
LINC00173-201ENST00000470091 TMEM94Q12767 1356 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms