RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 MAST1Q9Y2H9 1570 aa26.57■■□□□ 1.84
C4A-250ENST00000469975 KDM5DQ9BY66 1539 aa26.56■■□□□ 1.84
C4A-250ENST00000469975 FBXO31Q5XUX0 539 aaPredicted RBP26.54■■□□□ 1.84
C4A-250ENST00000469975 MIA2Q96PC5 1412 aa26.53■■□□□ 1.84
C4A-250ENST00000469975 LTBP4Q8N2S1 1624 aa26.52■■□□□ 1.84
C4A-250ENST00000469975 DNMT1P26358 1616 aaKnown RBP26.5■■□□□ 1.83
C4A-250ENST00000469975 WASHC2CQ9Y4E1 1318 aa26.5■■□□□ 1.83
C4A-250ENST00000469975 RNF17Q9BXT8 1623 aaKnown RBP26.5■■□□□ 1.83
C4A-250ENST00000469975 A2ML1A8K2U0 1454 aa26.49■■□□□ 1.83
C4A-250ENST00000469975 PZPP20742 1482 aa26.49■■□□□ 1.83
C4A-250ENST00000469975 FAM135AQ9P2D6 1515 aa26.48■■□□□ 1.83
C4A-250ENST00000469975 PLA2R1Q13018 1463 aa26.48■■□□□ 1.83
C4A-250ENST00000469975 CROCC2H7BZ55 1655 aa26.47■■□□□ 1.83
C4A-250ENST00000469975 TNRQ92752 1358 aa26.47■■□□□ 1.83
C4A-250ENST00000469975 PTPN23Q9H3S7 1636 aa26.47■■□□□ 1.83
C4A-250ENST00000469975 APLP2Q06481 763 aa26.46■■□□□ 1.83
C4A-250ENST00000469975 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
C4A-250ENST00000469975 EIF2AK4Q9P2K8 1649 aaKnown RBP26.45■■□□□ 1.82
C4A-250ENST00000469975 MROH1Q8NDA8 1641 aa26.44■■□□□ 1.82
C4A-250ENST00000469975 CEP152O94986 1710 aa26.44■■□□□ 1.82
C4A-250ENST00000469975 ABCC3O15438 1527 aa26.43■■□□□ 1.82
C4A-250ENST00000469975 ZNF335Q9H4Z2 1342 aaPredicted RBP26.41■■□□□ 1.82
C4A-250ENST00000469975 CFAP65Q6ZU64 1925 aaKnown RBP26.41■■□□□ 1.82
C4A-250ENST00000469975 PKD2Q13563 968 aa26.41■■□□□ 1.82
C4A-250ENST00000469975 POLR1AO95602 1720 aaPredicted RBP26.41■■□□□ 1.82
C4A-250ENST00000469975 ZC3H13Q5T200 1668 aaKnown RBP26.41■■□□□ 1.82
C4A-250ENST00000469975 ABCC5O15440 1437 aa26.4■■□□□ 1.82
C4A-250ENST00000469975 DUOX2Q9NRD8 1548 aa26.39■■□□□ 1.81
C4A-250ENST00000469975 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
C4A-250ENST00000469975 NEURL4Q96JN8 1562 aa26.37■■□□□ 1.81
C4A-250ENST00000469975 SHANK2Q9UPX8 1470 aa26.36■■□□□ 1.81
C4A-250ENST00000469975 DAPK1P53355 1430 aa26.35■■□□□ 1.81
C4A-250ENST00000469975 KIF15Q9NS87 1388 aa26.34■■□□□ 1.81
C4A-250ENST00000469975 RRP7BPQ9NSQ0 103 aa26.34■■□□□ 1.81
C4A-250ENST00000469975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.33■■□□□ 1.8
C4A-250ENST00000469975 SPATA31D1Q6ZQQ2 1576 aa26.32■■□□□ 1.8
C4A-250ENST00000469975 UGGT1Q9NYU2 1555 aa26.32■■□□□ 1.8
C4A-250ENST00000469975 NLRP1Q9C000 1473 aa26.31■■□□□ 1.8
C4A-250ENST00000469975 ERVK-7P63135 1459 aa26.3■■□□□ 1.8
C4A-250ENST00000469975 IQSEC2Q5JU85 1478 aa26.3■■□□□ 1.8
C4A-250ENST00000469975 CHIC2Q9UKJ5 165 aa26.29■■□□□ 1.8
C4A-250ENST00000469975 PRDM15P57071 1507 aaPredicted RBP26.28■■□□□ 1.8
C4A-250ENST00000469975 ERBINQ96RT1 1412 aa26.27■■□□□ 1.8
C4A-250ENST00000469975 DEPDC5O75140 1603 aa26.25■■□□□ 1.79
C4A-250ENST00000469975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.25■■□□□ 1.79
C4A-250ENST00000469975 THEMISQ8N1K5 641 aaPredicted RBP26.24■■□□□ 1.79
C4A-250ENST00000469975 ANKLE2Q86XL3 938 aa26.22■■□□□ 1.79
C4A-250ENST00000469975 UBR1Q8IWV7 1749 aa26.22■■□□□ 1.79
C4A-250ENST00000469975 IQGAP1P46940 1657 aa26.19■■□□□ 1.78
C4A-250ENST00000469975 NPHP4O75161 1426 aaPredicted RBP26.19■■□□□ 1.78
C4A-250ENST00000469975 ANKRD30AQ9BXX3 1397 aa26.19■■□□□ 1.78
C4A-250ENST00000469975 UBAP1LF5GYI3 381 aa26.18■■□□□ 1.78
C4A-250ENST00000469975 FAM50AQ14320 339 aaKnown RBP26.18■■□□□ 1.78
C4A-250ENST00000469975 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
C4A-250ENST00000469975 MED14O60244 1454 aa26.17■■□□□ 1.78
C4A-250ENST00000469975 ARHGAP31Q2M1Z3 1444 aa26.15■■□□□ 1.78
C4A-250ENST00000469975 STRCP1A6NGW2 1772 aa26.13■■□□□ 1.77
C4A-250ENST00000469975 ADGRL2O95490 1459 aa26.13■■□□□ 1.77
C4A-250ENST00000469975 PIK3C2BO00750 1634 aa26.13■■□□□ 1.77
C4A-250ENST00000469975 KANK1Q14678 1352 aa26.12■■□□□ 1.77
C4A-250ENST00000469975 CPS1P31327 1500 aa26.12■■□□□ 1.77
C4A-250ENST00000469975 LMTK2Q8IWU2 1503 aa26.09■■□□□ 1.77
C4A-250ENST00000469975 DISP3Q9P2K9 1392 aa26.07■■□□□ 1.76
C4A-250ENST00000469975 SYNMO15061 1565 aa26.07■■□□□ 1.76
C4A-250ENST00000469975 SCAF11Q99590 1463 aaKnown RBP26.05■■□□□ 1.76
C4A-250ENST00000469975 ARHGAP23Q9P227 1491 aa26.05■■□□□ 1.76
C4A-250ENST00000469975 EFCAB6Q5THR3 1501 aa26.05■■□□□ 1.76
C4A-250ENST00000469975 LTKP29376 864 aa26.05■■□□□ 1.76
C4A-250ENST00000469975 PPARGC1BQ86YN6 1023 aaKnown RBP26.05■■□□□ 1.76
C4A-250ENST00000469975 SLIT1O75093 1534 aa26.04■■□□□ 1.76
C4A-250ENST00000469975 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
C4A-250ENST00000469975 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
C4A-250ENST00000469975 PIP4K2BP78356 416 aa26.01■■□□□ 1.75
C4A-250ENST00000469975 TXNDC2Q86VQ3 553 aa26.01■■□□□ 1.75
C4A-250ENST00000469975 IDI1Q13907 227 aa25.99■■□□□ 1.75
C4A-250ENST00000469975 ALKQ9UM73 1620 aa25.99■■□□□ 1.75
C4A-250ENST00000469975 NOS1P29475 1434 aa25.97■■□□□ 1.75
C4A-250ENST00000469975 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
C4A-250ENST00000469975 ILDR2Q71H61 639 aa25.97■■□□□ 1.75
C4A-250ENST00000469975 STAG3Q9UJ98 1225 aa25.97■■□□□ 1.75
C4A-250ENST00000469975 LRRC7Q96NW7 1537 aa25.97■■□□□ 1.75
C4A-250ENST00000469975 TMEM2Q9UHN6 1383 aa25.96■■□□□ 1.75
C4A-250ENST00000469975 MYO5BQ9ULV0 1848 aa25.95■■□□□ 1.75
C4A-250ENST00000469975 TET3O43151 1660 aa25.95■■□□□ 1.74
C4A-250ENST00000469975 TOM1O60784 492 aa25.94■■□□□ 1.74
C4A-250ENST00000469975 UNC13BO14795 1591 aa25.94■■□□□ 1.74
C4A-250ENST00000469975 EID1Q9Y6B2 187 aa25.93■■□□□ 1.74
C4A-250ENST00000469975 ADGRB3O60242 1522 aa25.93■■□□□ 1.74
C4A-250ENST00000469975 GCC2Q8IWJ2 1684 aa25.93■■□□□ 1.74
C4A-250ENST00000469975 HSPA1LP34931 641 aa25.92■■□□□ 1.74
C4A-250ENST00000469975 ITGAEP38570 1179 aa25.92■■□□□ 1.74
C4A-250ENST00000469975 XIRP1Q702N8 1843 aaKnown RBP25.92■■□□□ 1.74
C4A-250ENST00000469975 E9PCH4 1651 aa25.88■■□□□ 1.73
C4A-250ENST00000469975 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
C4A-250ENST00000469975 ROCK1Q13464 1354 aa25.86■■□□□ 1.73
C4A-250ENST00000469975 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
C4A-250ENST00000469975 IQGAP3Q86VI3 1631 aa25.84■■□□□ 1.73
C4A-250ENST00000469975 SLC26A8Q96RN1 970 aa25.83■■□□□ 1.73
C4A-250ENST00000469975 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
C4A-250ENST00000469975 TMEM131LA2VDJ0 1609 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms