RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
TTC3-213ENST00000469939 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
TTC3-213ENST00000469939 SEMA3EO15041 775 aa9.01□□□□□ -0.97
TTC3-213ENST00000469939 TYW1BQ6NUM6 668 aa9.01□□□□□ -0.97
TTC3-213ENST00000469939 EPAS1Q99814 870 aa9.01□□□□□ -0.97
TTC3-213ENST00000469939 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
TTC3-213ENST00000469939 FBXW7Q969H0 707 aa9□□□□□ -0.97
TTC3-213ENST00000469939 KCNH8Q96L42 1107 aa9□□□□□ -0.97
TTC3-213ENST00000469939 TK2O00142 265 aa8.99□□□□□ -0.97
TTC3-213ENST00000469939 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
TTC3-213ENST00000469939 NBR1Q14596 966 aa8.99□□□□□ -0.97
TTC3-213ENST00000469939 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
TTC3-213ENST00000469939 BCL2L12Q9HB09 334 aa8.98□□□□□ -0.97
TTC3-213ENST00000469939 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
TTC3-213ENST00000469939 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
TTC3-213ENST00000469939 OSBPP22059 807 aa8.96□□□□□ -0.98
TTC3-213ENST00000469939 PTPREP23469 700 aa8.95□□□□□ -0.98
TTC3-213ENST00000469939 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
TTC3-213ENST00000469939 RBM33Q96EV2 1170 aaKnown RBP8.95□□□□□ -0.98
TTC3-213ENST00000469939 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
TTC3-213ENST00000469939 HRO43593 1189 aa8.94□□□□□ -0.98
TTC3-213ENST00000469939 MAP3K7O43318 606 aa8.93□□□□□ -0.98
TTC3-213ENST00000469939 PRIM1P49642 420 aaKnown RBP8.93□□□□□ -0.98
TTC3-213ENST00000469939 SMYD5Q6GMV2 418 aa8.93□□□□□ -0.98
TTC3-213ENST00000469939 C6orf132Q5T0Z8 1188 aa8.92□□□□□ -0.98
TTC3-213ENST00000469939 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
TTC3-213ENST00000469939 PTPN5P54829 565 aa8.89□□□□□ -0.99
TTC3-213ENST00000469939 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
TTC3-213ENST00000469939 TULP1O00294 542 aaPredicted RBP8.88□□□□□ -0.99
TTC3-213ENST00000469939 COL9A1P20849 921 aa8.87□□□□□ -0.99
TTC3-213ENST00000469939 VPS9D1Q9Y2B5 631 aa8.87□□□□□ -0.99
TTC3-213ENST00000469939 CDHR5Q9HBB8 845 aa8.86□□□□□ -0.99
TTC3-213ENST00000469939 GOLGA8CPA6NN73 597 aa8.85□□□□□ -0.99
TTC3-213ENST00000469939 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
TTC3-213ENST00000469939 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
TTC3-213ENST00000469939 ZBED2Q9BTP6 218 aa8.85□□□□□ -0.99
TTC3-213ENST00000469939 SLC4A5Q9BY07 1137 aa8.84□□□□□ -0.99
TTC3-213ENST00000469939 NUTM2FA1L443 756 aa8.83□□□□□ -1
TTC3-213ENST00000469939 NPDC1Q9NQX5 325 aaPredicted RBP8.82□□□□□ -1
TTC3-213ENST00000469939 PTGDRQ13258 359 aa8.81□□□□□ -1
TTC3-213ENST00000469939 PROX2Q3B8N5 592 aa8.81□□□□□ -1
TTC3-213ENST00000469939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
TTC3-213ENST00000469939 TRIM6-TRIM34B2RNG4 842 aa8.79□□□□□ -1
TTC3-213ENST00000469939 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
TTC3-213ENST00000469939 PRSS12P56730 875 aa8.79□□□□□ -1
TTC3-213ENST00000469939 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
TTC3-213ENST00000469939 CDCA7LQ96GN5 454 aa8.79□□□□□ -1
TTC3-213ENST00000469939 FCHSD2O94868 740 aa8.78□□□□□ -1
TTC3-213ENST00000469939 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
TTC3-213ENST00000469939 GPIHBP1Q8IV16 184 aa8.78□□□□□ -1
TTC3-213ENST00000469939 WNT2BQ93097 391 aa8.78□□□□□ -1
TTC3-213ENST00000469939 RBM27Q9P2N5 1060 aaKnown RBP8.78□□□□□ -1
TTC3-213ENST00000469939 RABGEF1Q9UJ41 708 aa8.78□□□□□ -1
TTC3-213ENST00000469939 LMOD2Q6P5Q4 547 aa8.77□□□□□ -1.01
TTC3-213ENST00000469939 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
TTC3-213ENST00000469939 TIMELESSQ9UNS1 1208 aa8.77□□□□□ -1.01
TTC3-213ENST00000469939 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
TTC3-213ENST00000469939 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
TTC3-213ENST00000469939 KIAA1468Q9P260 1216 aa8.76□□□□□ -1.01
TTC3-213ENST00000469939 GPR37O15354 613 aa8.75□□□□□ -1.01
TTC3-213ENST00000469939 HIC1Q14526 733 aa8.75□□□□□ -1.01
TTC3-213ENST00000469939 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
TTC3-213ENST00000469939 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
TTC3-213ENST00000469939 TTC13Q8NBP0 860 aa8.74□□□□□ -1.01
TTC3-213ENST00000469939 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
TTC3-213ENST00000469939 GNPATO15228 680 aa8.72□□□□□ -1.01
TTC3-213ENST00000469939 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
TTC3-213ENST00000469939 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
TTC3-213ENST00000469939 SEPT9Q9UHD8 586 aaPredicted RBP8.7□□□□□ -1.02
TTC3-213ENST00000469939 RGS20O76081 388 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 FECHP22830 423 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 IFFO2Q5TF58 517 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 TATDN2Q93075 761 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 GTF3C3Q9Y5Q9 886 aa8.69□□□□□ -1.02
TTC3-213ENST00000469939 A0A0G2JS52 829 aa8.68□□□□□ -1.02
TTC3-213ENST00000469939 C3orf80F5H4A9 247 aa8.68□□□□□ -1.02
TTC3-213ENST00000469939 FAM98CQ17RN3 349 aaKnown RBP8.68□□□□□ -1.02
TTC3-213ENST00000469939 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
TTC3-213ENST00000469939 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
TTC3-213ENST00000469939 IRX2Q9BZI1 471 aaPredicted RBP8.68□□□□□ -1.02
TTC3-213ENST00000469939 SMAPO00193 183 aa8.67□□□□□ -1.02
TTC3-213ENST00000469939 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
TTC3-213ENST00000469939 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
TTC3-213ENST00000469939 FAM161AQ3B820 660 aa8.65□□□□□ -1.02
TTC3-213ENST00000469939 RBM46Q8TBY0 533 aaKnown RBP8.65□□□□□ -1.02
TTC3-213ENST00000469939 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
TTC3-213ENST00000469939 EYA1Q99502 592 aa8.65□□□□□ -1.02
TTC3-213ENST00000469939 ZMYND10O75800 440 aa8.63□□□□□ -1.03
TTC3-213ENST00000469939 OATP04181 439 aa8.63□□□□□ -1.03
TTC3-213ENST00000469939 BCAMP50895 628 aa8.63□□□□□ -1.03
TTC3-213ENST00000469939 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
TTC3-213ENST00000469939 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
TTC3-213ENST00000469939 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
TTC3-213ENST00000469939 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
TTC3-213ENST00000469939 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
TTC3-213ENST00000469939 IRF6O14896 467 aa8.6□□□□□ -1.03
TTC3-213ENST00000469939 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
TTC3-213ENST00000469939 SOWAHBA6NEL2 793 aa8.59□□□□□ -1.03
TTC3-213ENST00000469939 DNAJB2P25686 324 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms