RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
SHROOM3-203ENST00000469923 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
SHROOM3-203ENST00000469923 NPATQ14207 1427 aa14.36□□□□□ -0.11
SHROOM3-203ENST00000469923 NCOA1Q15788 1441 aa14.36□□□□□ -0.11
SHROOM3-203ENST00000469923 ZNF335Q9H4Z2 1342 aaPredicted RBP14.36□□□□□ -0.11
SHROOM3-203ENST00000469923 TNRQ92752 1358 aa14.35□□□□□ -0.11
SHROOM3-203ENST00000469923 DAPK1P53355 1430 aa14.35□□□□□ -0.11
SHROOM3-203ENST00000469923 CAMSAP1Q5T5Y3 1602 aa14.35□□□□□ -0.11
SHROOM3-203ENST00000469923 PTPN23Q9H3S7 1636 aa14.35□□□□□ -0.11
SHROOM3-203ENST00000469923 ITGAEP38570 1179 aa14.35□□□□□ -0.11
SHROOM3-203ENST00000469923 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
SHROOM3-203ENST00000469923 CFAP65Q6ZU64 1925 aaKnown RBP14.33□□□□□ -0.11
SHROOM3-203ENST00000469923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHROOM3-203ENST00000469923 TCOF1Q13428 1488 aaKnown RBP14.32□□□□□ -0.12
SHROOM3-203ENST00000469923 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
SHROOM3-203ENST00000469923 DMRT2Q9Y5R5 561 aa14.32□□□□□ -0.12
SHROOM3-203ENST00000469923 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
SHROOM3-203ENST00000469923 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
SHROOM3-203ENST00000469923 MROH2AA6NES4 1674 aa14.31□□□□□ -0.12
SHROOM3-203ENST00000469923 ABCC3O15438 1527 aa14.31□□□□□ -0.12
SHROOM3-203ENST00000469923 PTPRTO14522 1441 aa14.3□□□□□ -0.12
SHROOM3-203ENST00000469923 PZPP20742 1482 aa14.29□□□□□ -0.12
SHROOM3-203ENST00000469923 LTKP29376 864 aa14.28□□□□□ -0.12
SHROOM3-203ENST00000469923 LTBP4Q8N2S1 1624 aa14.28□□□□□ -0.12
SHROOM3-203ENST00000469923 DNMT1P26358 1616 aaKnown RBP14.27□□□□□ -0.12
SHROOM3-203ENST00000469923 MYO3AQ8NEV4 1616 aa14.27□□□□□ -0.12
SHROOM3-203ENST00000469923 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
SHROOM3-203ENST00000469923 KDM5DQ9BY66 1539 aa14.27□□□□□ -0.12
SHROOM3-203ENST00000469923 A2ML1A8K2U0 1454 aa14.27□□□□□ -0.12
SHROOM3-203ENST00000469923 DUOX2Q9NRD8 1548 aa14.26□□□□□ -0.13
SHROOM3-203ENST00000469923 IDI1Q13907 227 aa14.26□□□□□ -0.13
SHROOM3-203ENST00000469923 PKD2Q13563 968 aa14.25□□□□□ -0.13
SHROOM3-203ENST00000469923 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
SHROOM3-203ENST00000469923 RNF17Q9BXT8 1623 aaKnown RBP14.24□□□□□ -0.13
SHROOM3-203ENST00000469923 THEMISQ8N1K5 641 aaPredicted RBP14.24□□□□□ -0.13
SHROOM3-203ENST00000469923 ERVK-7P63135 1459 aa14.24□□□□□ -0.13
SHROOM3-203ENST00000469923 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
SHROOM3-203ENST00000469923 CEP152O94986 1710 aa14.23□□□□□ -0.13
SHROOM3-203ENST00000469923 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
SHROOM3-203ENST00000469923 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
SHROOM3-203ENST00000469923 NEURL4Q96JN8 1562 aa14.2□□□□□ -0.14
SHROOM3-203ENST00000469923 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
SHROOM3-203ENST00000469923 ERBINQ96RT1 1412 aa14.19□□□□□ -0.14
SHROOM3-203ENST00000469923 TXNDC2Q86VQ3 553 aa14.19□□□□□ -0.14
SHROOM3-203ENST00000469923 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
SHROOM3-203ENST00000469923 ANKRD50Q9ULJ7 1429 aa14.18□□□□□ -0.14
SHROOM3-203ENST00000469923 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
SHROOM3-203ENST00000469923 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
SHROOM3-203ENST00000469923 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
SHROOM3-203ENST00000469923 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
SHROOM3-203ENST00000469923 UBAP1LF5GYI3 381 aa14.17□□□□□ -0.14
SHROOM3-203ENST00000469923 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
SHROOM3-203ENST00000469923 PRDM15P57071 1507 aaPredicted RBP14.16□□□□□ -0.14
SHROOM3-203ENST00000469923 NPHP4O75161 1426 aaPredicted RBP14.15□□□□□ -0.14
SHROOM3-203ENST00000469923 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
SHROOM3-203ENST00000469923 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
SHROOM3-203ENST00000469923 NLRP1Q9C000 1473 aa14.15□□□□□ -0.14
SHROOM3-203ENST00000469923 SLC26A8Q96RN1 970 aa14.15□□□□□ -0.14
SHROOM3-203ENST00000469923 VWDEQ8N2E2 1590 aa14.14□□□□□ -0.15
SHROOM3-203ENST00000469923 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
SHROOM3-203ENST00000469923 KANK1Q14678 1352 aa14.13□□□□□ -0.15
SHROOM3-203ENST00000469923 FAM135AQ9P2D6 1515 aa14.12□□□□□ -0.15
SHROOM3-203ENST00000469923 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
SHROOM3-203ENST00000469923 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
SHROOM3-203ENST00000469923 SYNMO15061 1565 aa14.11□□□□□ -0.15
SHROOM3-203ENST00000469923 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-203ENST00000469923 NOS1P29475 1434 aa14.11□□□□□ -0.15
SHROOM3-203ENST00000469923 NUP155O75694 1391 aa14.1□□□□□ -0.15
SHROOM3-203ENST00000469923 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
SHROOM3-203ENST00000469923 MED14O60244 1454 aa14.1□□□□□ -0.15
SHROOM3-203ENST00000469923 LMTK2Q8IWU2 1503 aa14.1□□□□□ -0.15
SHROOM3-203ENST00000469923 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
SHROOM3-203ENST00000469923 STRCP1A6NGW2 1772 aa14.09□□□□□ -0.15
SHROOM3-203ENST00000469923 PIK3C2BO00750 1634 aa14.09□□□□□ -0.15
SHROOM3-203ENST00000469923 UBR1Q8IWV7 1749 aa14.09□□□□□ -0.15
SHROOM3-203ENST00000469923 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
SHROOM3-203ENST00000469923 HSPA1LP34931 641 aa14.08□□□□□ -0.16
SHROOM3-203ENST00000469923 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
SHROOM3-203ENST00000469923 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
SHROOM3-203ENST00000469923 ZC3H13Q5T200 1668 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-203ENST00000469923 FOXD1Q16676 465 aa14.06□□□□□ -0.16
SHROOM3-203ENST00000469923 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
SHROOM3-203ENST00000469923 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
SHROOM3-203ENST00000469923 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
SHROOM3-203ENST00000469923 EID1Q9Y6B2 187 aa14.05□□□□□ -0.16
SHROOM3-203ENST00000469923 RRBP1Q9P2E9 1410 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-203ENST00000469923 EFCAB6Q5THR3 1501 aa14.05□□□□□ -0.16
SHROOM3-203ENST00000469923 BCANQ96GW7 911 aa14.04□□□□□ -0.16
SHROOM3-203ENST00000469923 SLIT1O75093 1534 aa14.04□□□□□ -0.16
SHROOM3-203ENST00000469923 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
SHROOM3-203ENST00000469923 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
SHROOM3-203ENST00000469923 NAIPQ13075 1403 aa14.03□□□□□ -0.16
SHROOM3-203ENST00000469923 IQGAP1P46940 1657 aa14.01□□□□□ -0.17
SHROOM3-203ENST00000469923 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
SHROOM3-203ENST00000469923 RIMS2Q9UQ26 1411 aa14□□□□□ -0.17
SHROOM3-203ENST00000469923 KCNA6P17658 529 aa14□□□□□ -0.17
SHROOM3-203ENST00000469923 E9PCH4 1651 aa14□□□□□ -0.17
SHROOM3-203ENST00000469923 TET3O43151 1660 aa14□□□□□ -0.17
SHROOM3-203ENST00000469923 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
SHROOM3-203ENST00000469923 PROSER2Q86WR7 435 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms