RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MLH3Q9UHC1 1453 aa26.02■■□□□ 1.76
SMC4-211ENST00000469858 EIF2AK4Q9P2K8 1649 aaKnown RBP26.02■■□□□ 1.76
SMC4-211ENST00000469858 RICTORQ6R327 1708 aa26.01■■□□□ 1.75
SMC4-211ENST00000469858 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
SMC4-211ENST00000469858 PPRC1Q5VV67 1664 aaKnown RBP26■■□□□ 1.75
SMC4-211ENST00000469858 DIEXFQ68CQ4 756 aaKnown RBP26■■□□□ 1.75
SMC4-211ENST00000469858 TEX14Q8IWB6 1497 aa25.99■■□□□ 1.75
SMC4-211ENST00000469858 RAPGEF3O95398 923 aa25.99■■□□□ 1.75
SMC4-211ENST00000469858 L3MBTL2Q969R5 705 aa25.99■■□□□ 1.75
SMC4-211ENST00000469858 KIF13AQ9H1H9 1805 aa25.99■■□□□ 1.75
SMC4-211ENST00000469858 ABCA6Q8N139 1617 aa25.96■■□□□ 1.75
SMC4-211ENST00000469858 A2MP01023 1474 aa25.95■■□□□ 1.75
SMC4-211ENST00000469858 KIF3BO15066 747 aa25.95■■□□□ 1.75
SMC4-211ENST00000469858 FRMPD1Q5SYB0 1578 aa25.92■■□□□ 1.74
SMC4-211ENST00000469858 PRDM15P57071 1507 aaPredicted RBP25.91■■□□□ 1.74
SMC4-211ENST00000469858 MROH1Q8NDA8 1641 aa25.91■■□□□ 1.74
SMC4-211ENST00000469858 KANK1Q14678 1352 aa25.9■■□□□ 1.74
SMC4-211ENST00000469858 VWDEQ8N2E2 1590 aa25.89■■□□□ 1.74
SMC4-211ENST00000469858 E9PCH4 1651 aa25.89■■□□□ 1.73
SMC4-211ENST00000469858 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
SMC4-211ENST00000469858 TET3O43151 1660 aa25.88■■□□□ 1.73
SMC4-211ENST00000469858 CCDC144AA2RUR9 1427 aa25.87■■□□□ 1.73
SMC4-211ENST00000469858 PLA2R1Q13018 1463 aa25.86■■□□□ 1.73
SMC4-211ENST00000469858 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
SMC4-211ENST00000469858 BCORL1Q5H9F3 1711 aa25.83■■□□□ 1.73
SMC4-211ENST00000469858 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.72
SMC4-211ENST00000469858 ATP10AO60312 1499 aa25.81■■□□□ 1.72
SMC4-211ENST00000469858 YEATS2Q9ULM3 1422 aa25.81■■□□□ 1.72
SMC4-211ENST00000469858 CEP152O94986 1710 aa25.8■■□□□ 1.72
SMC4-211ENST00000469858 SPHKAPQ2M3C7 1700 aa25.8■■□□□ 1.72
SMC4-211ENST00000469858 NBPF8Q3BBV2 869 aa25.8■■□□□ 1.72
SMC4-211ENST00000469858 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
SMC4-211ENST00000469858 EFCAB6Q5THR3 1501 aa25.75■■□□□ 1.71
SMC4-211ENST00000469858 TRPM2O94759 1503 aa25.75■■□□□ 1.71
SMC4-211ENST00000469858 GGT6Q6P531 493 aa25.75■■□□□ 1.71
SMC4-211ENST00000469858 LMTK2Q8IWU2 1503 aa25.73■■□□□ 1.71
SMC4-211ENST00000469858 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
SMC4-211ENST00000469858 PTPRTO14522 1441 aa25.71■■□□□ 1.71
SMC4-211ENST00000469858 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
SMC4-211ENST00000469858 UHRF1BP1Q6BDS2 1440 aa25.69■■□□□ 1.7
SMC4-211ENST00000469858 CLTCL1P53675 1640 aa25.69■■□□□ 1.7
SMC4-211ENST00000469858 RGL3Q3MIN7 710 aa25.68■■□□□ 1.7
SMC4-211ENST00000469858 COL17A1Q9UMD9 1497 aaPredicted RBP25.68■■□□□ 1.7
SMC4-211ENST00000469858 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
SMC4-211ENST00000469858 ABCC3O15438 1527 aa25.66■■□□□ 1.7
SMC4-211ENST00000469858 EIF4G2P78344 907 aaKnown RBP eCLIP25.65■■□□□ 1.7
SMC4-211ENST00000469858 HSPA5P11021 654 aaKnown RBP25.65■■□□□ 1.7
SMC4-211ENST00000469858 WASHC2CQ9Y4E1 1318 aa25.64■■□□□ 1.7
SMC4-211ENST00000469858 CAMSAP1Q5T5Y3 1602 aa25.64■■□□□ 1.69
SMC4-211ENST00000469858 CFAP65Q6ZU64 1925 aaKnown RBP25.63■■□□□ 1.69
SMC4-211ENST00000469858 ZC3H13Q5T200 1668 aaKnown RBP25.62■■□□□ 1.69
SMC4-211ENST00000469858 RALGAPBQ86X10 1494 aa25.61■■□□□ 1.69
SMC4-211ENST00000469858 REREQ9P2R6 1566 aa25.61■■□□□ 1.69
SMC4-211ENST00000469858 SPATA31E1Q6ZUB1 1445 aa25.61■■□□□ 1.69
SMC4-211ENST00000469858 NPATQ14207 1427 aa25.61■■□□□ 1.69
SMC4-211ENST00000469858 ARHGEF40Q8TER5 1519 aa25.59■■□□□ 1.69
SMC4-211ENST00000469858 UGGT1Q9NYU2 1555 aa25.59■■□□□ 1.69
SMC4-211ENST00000469858 MIER1Q8N108 512 aa25.58■■□□□ 1.69
SMC4-211ENST00000469858 PRAG1Q86YV5 1406 aa25.57■■□□□ 1.68
SMC4-211ENST00000469858 KIF1BO60333 1816 aa25.57■■□□□ 1.68
SMC4-211ENST00000469858 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
SMC4-211ENST00000469858 SIGLEC1Q9BZZ2 1709 aa25.55■■□□□ 1.68
SMC4-211ENST00000469858 AGLP35573 1532 aa25.55■■□□□ 1.68
SMC4-211ENST00000469858 DDX10Q13206 875 aaKnown RBP25.55■■□□□ 1.68
SMC4-211ENST00000469858 USP47Q96K76 1375 aa25.51■■□□□ 1.67
SMC4-211ENST00000469858 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
SMC4-211ENST00000469858 NEURL4Q96JN8 1562 aa25.51■■□□□ 1.67
SMC4-211ENST00000469858 CNTLNQ9NXG0 1405 aa25.5■■□□□ 1.67
SMC4-211ENST00000469858 MROH2AA6NES4 1674 aa25.49■■□□□ 1.67
SMC4-211ENST00000469858 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
SMC4-211ENST00000469858 ROCK2O75116 1388 aaKnown RBP25.49■■□□□ 1.67
SMC4-211ENST00000469858 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
SMC4-211ENST00000469858 ARHGAP31Q2M1Z3 1444 aa25.48■■□□□ 1.67
SMC4-211ENST00000469858 MADDQ8WXG6 1647 aa25.46■■□□□ 1.67
SMC4-211ENST00000469858 NOS1P29475 1434 aa25.46■■□□□ 1.67
SMC4-211ENST00000469858 POLR1AO95602 1720 aaPredicted RBP25.45■■□□□ 1.66
SMC4-211ENST00000469858 WASHC2AQ641Q2 1341 aa25.45■■□□□ 1.66
SMC4-211ENST00000469858 SYNMO15061 1565 aa25.44■■□□□ 1.66
SMC4-211ENST00000469858 ADGRB3O60242 1522 aa25.43■■□□□ 1.66
SMC4-211ENST00000469858 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
SMC4-211ENST00000469858 PREX1Q8TCU6 1659 aa25.43■■□□□ 1.66
SMC4-211ENST00000469858 IFT172Q9UG01 1749 aa25.42■■□□□ 1.66
SMC4-211ENST00000469858 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
SMC4-211ENST00000469858 MLECQ14165 292 aa25.4■■□□□ 1.66
SMC4-211ENST00000469858 NBPF1Q3BBV0 1214 aa25.4■■□□□ 1.66
SMC4-211ENST00000469858 LAMC1P11047 1609 aa25.4■■□□□ 1.66
SMC4-211ENST00000469858 C11orf95C9JLR9 678 aaPredicted RBP25.4■■□□□ 1.66
SMC4-211ENST00000469858 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
SMC4-211ENST00000469858 STAC3Q96MF2 364 aa25.39■■□□□ 1.66
SMC4-211ENST00000469858 GPRASP1Q5JY77 1395 aa25.39■■□□□ 1.65
SMC4-211ENST00000469858 PPP6R1Q9UPN7 881 aa25.38■■□□□ 1.65
SMC4-211ENST00000469858 CCDC7Q96M83 1385 aa25.38■■□□□ 1.65
SMC4-211ENST00000469858 MYOM2P54296 1465 aa25.36■■□□□ 1.65
SMC4-211ENST00000469858 PPLO60437 1756 aa25.34■■□□□ 1.65
SMC4-211ENST00000469858 KIF7Q2M1P5 1343 aa25.33■■□□□ 1.65
SMC4-211ENST00000469858 ST20-MTHFSA0A0A6YYL1 179 aa25.33■■□□□ 1.64
SMC4-211ENST00000469858 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
SMC4-211ENST00000469858 ERVK-7P63135 1459 aa25.31■■□□□ 1.64
SMC4-211ENST00000469858 KIAA1210Q9ULL0 1709 aa25.31■■□□□ 1.64
SMC4-211ENST00000469858 FBXO31Q5XUX0 539 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms