RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
SEMA4D-215ENST00000469653 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
SEMA4D-215ENST00000469653 YEATS2Q9ULM3 1422 aa14.36□□□□□ -0.11
SEMA4D-215ENST00000469653 ABCA6Q8N139 1617 aa14.35□□□□□ -0.11
SEMA4D-215ENST00000469653 RRP7BPQ9NSQ0 103 aa14.35□□□□□ -0.11
SEMA4D-215ENST00000469653 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
SEMA4D-215ENST00000469653 ADGRL2O95490 1459 aa14.34□□□□□ -0.11
SEMA4D-215ENST00000469653 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
SEMA4D-215ENST00000469653 NCOA1Q15788 1441 aa14.34□□□□□ -0.11
SEMA4D-215ENST00000469653 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
SEMA4D-215ENST00000469653 ARHGEF40Q8TER5 1519 aa14.33□□□□□ -0.11
SEMA4D-215ENST00000469653 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
SEMA4D-215ENST00000469653 KIF15Q9NS87 1388 aa14.32□□□□□ -0.12
SEMA4D-215ENST00000469653 ATP10AO60312 1499 aa14.31□□□□□ -0.12
SEMA4D-215ENST00000469653 DUOX2Q9NRD8 1548 aa14.29□□□□□ -0.12
SEMA4D-215ENST00000469653 A2MP01023 1474 aa14.29□□□□□ -0.12
SEMA4D-215ENST00000469653 HOMEZQ8IX15 550 aa14.29□□□□□ -0.12
SEMA4D-215ENST00000469653 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
SEMA4D-215ENST00000469653 GCC2Q8IWJ2 1684 aa14.28□□□□□ -0.12
SEMA4D-215ENST00000469653 DHX29Q7Z478 1369 aaKnown RBP14.28□□□□□ -0.12
SEMA4D-215ENST00000469653 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
SEMA4D-215ENST00000469653 NAIPQ13075 1403 aa14.28□□□□□ -0.12
SEMA4D-215ENST00000469653 SIGLEC1Q9BZZ2 1709 aa14.27□□□□□ -0.12
SEMA4D-215ENST00000469653 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
SEMA4D-215ENST00000469653 REREQ9P2R6 1566 aa14.26□□□□□ -0.13
SEMA4D-215ENST00000469653 ANKRD50Q9ULJ7 1429 aa14.26□□□□□ -0.13
SEMA4D-215ENST00000469653 ERBINQ96RT1 1412 aa14.25□□□□□ -0.13
SEMA4D-215ENST00000469653 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
SEMA4D-215ENST00000469653 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
SEMA4D-215ENST00000469653 SETD5Q9C0A6 1442 aa14.23□□□□□ -0.13
SEMA4D-215ENST00000469653 KIF3BO15066 747 aa14.23□□□□□ -0.13
SEMA4D-215ENST00000469653 EIF2AK4Q9P2K8 1649 aaKnown RBP14.23□□□□□ -0.13
SEMA4D-215ENST00000469653 AGLP35573 1532 aa14.21□□□□□ -0.13
SEMA4D-215ENST00000469653 BCORL1Q5H9F3 1711 aa14.21□□□□□ -0.13
SEMA4D-215ENST00000469653 HAP1P54257 671 aaPredicted RBP14.21□□□□□ -0.14
SEMA4D-215ENST00000469653 DHX57Q6P158 1386 aaKnown RBP14.2□□□□□ -0.14
SEMA4D-215ENST00000469653 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
SEMA4D-215ENST00000469653 MLECQ14165 292 aa14.2□□□□□ -0.14
SEMA4D-215ENST00000469653 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
SEMA4D-215ENST00000469653 GGT6Q6P531 493 aa14.19□□□□□ -0.14
SEMA4D-215ENST00000469653 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
SEMA4D-215ENST00000469653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
SEMA4D-215ENST00000469653 CNGB1Q14028 1251 aaPredicted RBP14.18□□□□□ -0.14
SEMA4D-215ENST00000469653 DEPDC5O75140 1603 aa14.17□□□□□ -0.14
SEMA4D-215ENST00000469653 CLSPNQ9HAW4 1339 aa14.17□□□□□ -0.14
SEMA4D-215ENST00000469653 HIRIP3Q9BW71 556 aaPredicted RBP14.16□□□□□ -0.14
SEMA4D-215ENST00000469653 UNC13BO14795 1591 aa14.16□□□□□ -0.14
SEMA4D-215ENST00000469653 MROH1Q8NDA8 1641 aa14.16□□□□□ -0.14
SEMA4D-215ENST00000469653 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
SEMA4D-215ENST00000469653 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
SEMA4D-215ENST00000469653 PRDM15P57071 1507 aaPredicted RBP14.14□□□□□ -0.15
SEMA4D-215ENST00000469653 NUP155O75694 1391 aa14.13□□□□□ -0.15
SEMA4D-215ENST00000469653 KANK1Q14678 1352 aa14.12□□□□□ -0.15
SEMA4D-215ENST00000469653 CEP152O94986 1710 aa14.12□□□□□ -0.15
SEMA4D-215ENST00000469653 NPM2Q86SE8 214 aaKnown RBP14.12□□□□□ -0.15
SEMA4D-215ENST00000469653 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
SEMA4D-215ENST00000469653 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
SEMA4D-215ENST00000469653 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-215ENST00000469653 CLTCQ00610 1675 aaKnown RBP14.11□□□□□ -0.15
SEMA4D-215ENST00000469653 IQGAP3Q86VI3 1631 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 ESF1Q9H501 851 aaKnown RBP14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 PPP6R1Q9UPN7 881 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 ADAMTSL3P82987 1691 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
SEMA4D-215ENST00000469653 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
SEMA4D-215ENST00000469653 ABCC3O15438 1527 aa14.09□□□□□ -0.15
SEMA4D-215ENST00000469653 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
SEMA4D-215ENST00000469653 PZPP20742 1482 aa14.07□□□□□ -0.16
SEMA4D-215ENST00000469653 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-215ENST00000469653 RIMS1Q86UR5 1692 aaKnown RBP14.07□□□□□ -0.16
SEMA4D-215ENST00000469653 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
SEMA4D-215ENST00000469653 TET3O43151 1660 aa14.06□□□□□ -0.16
SEMA4D-215ENST00000469653 CFAP65Q6ZU64 1925 aaKnown RBP14.06□□□□□ -0.16
SEMA4D-215ENST00000469653 LMTK2Q8IWU2 1503 aa14.06□□□□□ -0.16
SEMA4D-215ENST00000469653 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
SEMA4D-215ENST00000469653 CNTLNQ9NXG0 1405 aa14.05□□□□□ -0.16
SEMA4D-215ENST00000469653 ANP32EQ9BTT0 268 aa14.04□□□□□ -0.16
SEMA4D-215ENST00000469653 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
SEMA4D-215ENST00000469653 E9PCH4 1651 aa14.04□□□□□ -0.16
SEMA4D-215ENST00000469653 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
SEMA4D-215ENST00000469653 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
SEMA4D-215ENST00000469653 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
SEMA4D-215ENST00000469653 PKD2Q13563 968 aa14.03□□□□□ -0.16
SEMA4D-215ENST00000469653 C3P01024 1663 aa14.02□□□□□ -0.16
SEMA4D-215ENST00000469653 SENP3-EIF4A1A0A087X0R7 540 aa14.02□□□□□ -0.17
SEMA4D-215ENST00000469653 FOXD1Q16676 465 aa14.02□□□□□ -0.17
SEMA4D-215ENST00000469653 DHX37Q8IY37 1157 aaKnown RBP14.02□□□□□ -0.17
SEMA4D-215ENST00000469653 PDE4CQ08493 712 aa14.01□□□□□ -0.17
SEMA4D-215ENST00000469653 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
SEMA4D-215ENST00000469653 NPATQ14207 1427 aa14.01□□□□□ -0.17
SEMA4D-215ENST00000469653 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
SEMA4D-215ENST00000469653 ARHGAP31Q2M1Z3 1444 aa14□□□□□ -0.17
SEMA4D-215ENST00000469653 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-215ENST00000469653 PTPRMP28827 1452 aa13.99□□□□□ -0.17
SEMA4D-215ENST00000469653 FBXO31Q5XUX0 539 aaPredicted RBP13.98□□□□□ -0.17
SEMA4D-215ENST00000469653 RPRD2Q5VT52 1461 aaKnown RBP13.98□□□□□ -0.17
SEMA4D-215ENST00000469653 PREX1Q8TCU6 1659 aa13.98□□□□□ -0.17
SEMA4D-215ENST00000469653 FKBP8Q14318 412 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms