RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 KIDINS220Q9ULH0 1771 aa13.99□□□□□ -0.17
FN1-216ENST00000469569 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
FN1-216ENST00000469569 TCOF1Q13428 1488 aaKnown RBP13.99□□□□□ -0.17
FN1-216ENST00000469569 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
FN1-216ENST00000469569 A2MP01023 1474 aa13.98□□□□□ -0.17
FN1-216ENST00000469569 BCORL1Q5H9F3 1711 aa13.98□□□□□ -0.17
FN1-216ENST00000469569 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
FN1-216ENST00000469569 PTPN23Q9H3S7 1636 aa13.97□□□□□ -0.17
FN1-216ENST00000469569 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
FN1-216ENST00000469569 ADAMTSL3P82987 1691 aa13.96□□□□□ -0.17
FN1-216ENST00000469569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.96□□□□□ -0.18
FN1-216ENST00000469569 SHANK2Q9UPX8 1470 aa13.95□□□□□ -0.18
FN1-216ENST00000469569 MLECQ14165 292 aa13.95□□□□□ -0.18
FN1-216ENST00000469569 FAM50AQ14320 339 aaKnown RBP13.95□□□□□ -0.18
FN1-216ENST00000469569 MAST1Q9Y2H9 1570 aa13.95□□□□□ -0.18
FN1-216ENST00000469569 ADGBQ8N7X0 1667 aa13.95□□□□□ -0.18
FN1-216ENST00000469569 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
FN1-216ENST00000469569 ABCC5O15440 1437 aa13.92□□□□□ -0.18
FN1-216ENST00000469569 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
FN1-216ENST00000469569 ANKRD30AQ9BXX3 1397 aa13.92□□□□□ -0.18
FN1-216ENST00000469569 PTPRMP28827 1452 aa13.92□□□□□ -0.18
FN1-216ENST00000469569 DAPK1P53355 1430 aa13.91□□□□□ -0.18
FN1-216ENST00000469569 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
FN1-216ENST00000469569 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.19
FN1-216ENST00000469569 KIF3BO15066 747 aa13.89□□□□□ -0.19
FN1-216ENST00000469569 GGT6Q6P531 493 aa13.88□□□□□ -0.19
FN1-216ENST00000469569 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
FN1-216ENST00000469569 DUOX2Q9NRD8 1548 aa13.88□□□□□ -0.19
FN1-216ENST00000469569 FAM135AQ9P2D6 1515 aa13.88□□□□□ -0.19
FN1-216ENST00000469569 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
FN1-216ENST00000469569 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
FN1-216ENST00000469569 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
FN1-216ENST00000469569 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
FN1-216ENST00000469569 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
FN1-216ENST00000469569 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
FN1-216ENST00000469569 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
FN1-216ENST00000469569 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
FN1-216ENST00000469569 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
FN1-216ENST00000469569 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
FN1-216ENST00000469569 CHIC2Q9UKJ5 165 aa13.84□□□□□ -0.19
FN1-216ENST00000469569 CROCC2H7BZ55 1655 aa13.84□□□□□ -0.19
FN1-216ENST00000469569 RIMS1Q86UR5 1692 aaKnown RBP13.84□□□□□ -0.19
FN1-216ENST00000469569 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
FN1-216ENST00000469569 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.2
FN1-216ENST00000469569 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
FN1-216ENST00000469569 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
FN1-216ENST00000469569 KANK1Q14678 1352 aa13.82□□□□□ -0.2
FN1-216ENST00000469569 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
FN1-216ENST00000469569 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
FN1-216ENST00000469569 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
FN1-216ENST00000469569 NPATQ14207 1427 aa13.81□□□□□ -0.2
FN1-216ENST00000469569 MROH2AA6NES4 1674 aa13.8□□□□□ -0.2
FN1-216ENST00000469569 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
FN1-216ENST00000469569 ANKRD50Q9ULJ7 1429 aa13.78□□□□□ -0.2
FN1-216ENST00000469569 KDM5DQ9BY66 1539 aa13.78□□□□□ -0.2
FN1-216ENST00000469569 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
FN1-216ENST00000469569 CEBPAP49715 358 aaPredicted RBP13.77□□□□□ -0.21
FN1-216ENST00000469569 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
FN1-216ENST00000469569 ITGAEP38570 1179 aa13.76□□□□□ -0.21
FN1-216ENST00000469569 UHRF1BP1Q6BDS2 1440 aa13.75□□□□□ -0.21
FN1-216ENST00000469569 PTPRKQ15262 1439 aa13.74□□□□□ -0.21
FN1-216ENST00000469569 C3P01024 1663 aa13.73□□□□□ -0.21
FN1-216ENST00000469569 CLTCQ00610 1675 aaKnown RBP13.73□□□□□ -0.21
FN1-216ENST00000469569 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
FN1-216ENST00000469569 PZPP20742 1482 aa13.73□□□□□ -0.21
FN1-216ENST00000469569 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
FN1-216ENST00000469569 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
FN1-216ENST00000469569 ARHGAP31Q2M1Z3 1444 aa13.72□□□□□ -0.21
FN1-216ENST00000469569 ABCC3O15438 1527 aa13.71□□□□□ -0.21
FN1-216ENST00000469569 SSUH2Q9Y2M2 353 aa13.71□□□□□ -0.21
FN1-216ENST00000469569 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
FN1-216ENST00000469569 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
FN1-216ENST00000469569 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
FN1-216ENST00000469569 TNRQ92752 1358 aa13.7□□□□□ -0.22
FN1-216ENST00000469569 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
FN1-216ENST00000469569 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
FN1-216ENST00000469569 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
FN1-216ENST00000469569 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
FN1-216ENST00000469569 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
FN1-216ENST00000469569 PROM2Q8N271 834 aa13.66□□□□□ -0.22
FN1-216ENST00000469569 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
FN1-216ENST00000469569 FBXO31Q5XUX0 539 aaPredicted RBP13.65□□□□□ -0.22
FN1-216ENST00000469569 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
FN1-216ENST00000469569 NAIPQ13075 1403 aa13.64□□□□□ -0.23
FN1-216ENST00000469569 NUP155O75694 1391 aa13.64□□□□□ -0.23
FN1-216ENST00000469569 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
FN1-216ENST00000469569 PKD2Q13563 968 aa13.63□□□□□ -0.23
FN1-216ENST00000469569 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
FN1-216ENST00000469569 CAMSAP1Q5T5Y3 1602 aa13.63□□□□□ -0.23
FN1-216ENST00000469569 UNC13BO14795 1591 aa13.62□□□□□ -0.23
FN1-216ENST00000469569 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
FN1-216ENST00000469569 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
FN1-216ENST00000469569 HSPA2P54652 639 aa13.62□□□□□ -0.23
FN1-216ENST00000469569 CEP152O94986 1710 aa13.61□□□□□ -0.23
FN1-216ENST00000469569 EFCAB6Q5THR3 1501 aa13.6□□□□□ -0.23
FN1-216ENST00000469569 CEP170BQ9Y4F5 1589 aaPredicted RBP13.6□□□□□ -0.23
FN1-216ENST00000469569 PLA2R1Q13018 1463 aa13.6□□□□□ -0.23
FN1-216ENST00000469569 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
FN1-216ENST00000469569 TRIM52Q96A61 297 aa13.59□□□□□ -0.23
FN1-216ENST00000469569 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms