RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
ITGA6-208ENST00000469534 G3V3G9 751 aa8.22□□□□□ -1.09
ITGA6-208ENST00000469534 PKD2Q13563 968 aa8.22□□□□□ -1.09
ITGA6-208ENST00000469534 LRRIQ1Q96JM4 1722 aa8.22□□□□□ -1.09
ITGA6-208ENST00000469534 SHROOM2Q13796 1616 aa8.21□□□□□ -1.09
ITGA6-208ENST00000469534 MS4A4AQ96JQ5 239 aa8.2□□□□□ -1.1
ITGA6-208ENST00000469534 ECM2O94769 699 aaPredicted RBP8.19□□□□□ -1.1
ITGA6-208ENST00000469534 HS3ST6Q96QI5 342 aa8.19□□□□□ -1.1
ITGA6-208ENST00000469534 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
ITGA6-208ENST00000469534 CARMIL2Q6F5E8 1435 aa8.18□□□□□ -1.1
ITGA6-208ENST00000469534 FAM205CA6NFA0 338 aa8.17□□□□□ -1.1
ITGA6-208ENST00000469534 PHF8Q9UPP1 1060 aa8.17□□□□□ -1.1
ITGA6-208ENST00000469534 POTEB3A0JP26 581 aa8.16□□□□□ -1.1
ITGA6-208ENST00000469534 CDK13Q14004 1512 aaKnown RBP8.16□□□□□ -1.1
ITGA6-208ENST00000469534 PLB1Q6P1J6 1458 aa8.16□□□□□ -1.1
ITGA6-208ENST00000469534 POTEBQ6S5H4 581 aa8.16□□□□□ -1.1
ITGA6-208ENST00000469534 RAPGEF6Q8TEU7 1601 aa8.16□□□□□ -1.1
ITGA6-208ENST00000469534 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
ITGA6-208ENST00000469534 RGL2O15211 777 aa8.15□□□□□ -1.1
ITGA6-208ENST00000469534 MICALL2Q8IY33 904 aa8.15□□□□□ -1.1
ITGA6-208ENST00000469534 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
ITGA6-208ENST00000469534 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
ITGA6-208ENST00000469534 CFAP43Q8NDM7 1665 aa8.14□□□□□ -1.11
ITGA6-208ENST00000469534 HECW1Q76N89 1606 aa8.14□□□□□ -1.11
ITGA6-208ENST00000469534 FMN1Q68DA7 1419 aa8.14□□□□□ -1.11
ITGA6-208ENST00000469534 HOXB3P14651 431 aaPredicted RBP8.14□□□□□ -1.11
ITGA6-208ENST00000469534 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
ITGA6-208ENST00000469534 FBXO22Q8NEZ5 403 aa8.14□□□□□ -1.11
ITGA6-208ENST00000469534 TIAM1Q13009 1591 aa8.14□□□□□ -1.11
ITGA6-208ENST00000469534 FYCO1Q9BQS8 1478 aa8.13□□□□□ -1.11
ITGA6-208ENST00000469534 PTPRGP23470 1445 aa8.13□□□□□ -1.11
ITGA6-208ENST00000469534 CASKIN1Q8WXD9 1431 aa8.13□□□□□ -1.11
ITGA6-208ENST00000469534 STK24Q9Y6E0 443 aa8.13□□□□□ -1.11
ITGA6-208ENST00000469534 RIMBP3CA6NJZ7 1639 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 RIMBP3BA6NNM3 1639 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 RIMBP3Q9UFD9 1639 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 NLRP6P59044 892 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 TMEM92Q6UXU6 159 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 ZNF710Q8N1W2 664 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 ABCA8O94911 1581 aa8.12□□□□□ -1.11
ITGA6-208ENST00000469534 STK25O00506 426 aa8.11□□□□□ -1.11
ITGA6-208ENST00000469534 DOK7Q18PE1 504 aa8.11□□□□□ -1.11
ITGA6-208ENST00000469534 MFRPQ9BY79 579 aa8.11□□□□□ -1.11
ITGA6-208ENST00000469534 ARHGEF11O15085 1522 aa8.11□□□□□ -1.11
ITGA6-208ENST00000469534 NUP153P49790 1475 aaKnown RBP8.11□□□□□ -1.11
ITGA6-208ENST00000469534 EPRSP07814 1512 aaKnown RBP8.09□□□□□ -1.11
ITGA6-208ENST00000469534 MAGI3Q5TCQ9 1506 aa8.09□□□□□ -1.11
ITGA6-208ENST00000469534 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
ITGA6-208ENST00000469534 ADCY10Q96PN6 1610 aa8.08□□□□□ -1.12
ITGA6-208ENST00000469534 UACAQ9BZF9 1416 aa8.08□□□□□ -1.12
ITGA6-208ENST00000469534 ZCCHC11Q5TAX3 1644 aaKnown RBP8.07□□□□□ -1.12
ITGA6-208ENST00000469534 RIMBP2O15034 1052 aa8.07□□□□□ -1.12
ITGA6-208ENST00000469534 CYB5RLQ6IPT4 315 aa8.07□□□□□ -1.12
ITGA6-208ENST00000469534 PCGF6Q9BYE7 350 aa8.07□□□□□ -1.12
ITGA6-208ENST00000469534 ABCC2Q92887 1545 aa8.07□□□□□ -1.12
ITGA6-208ENST00000469534 MTUS2Q5JR59 1369 aa8.07□□□□□ -1.12
ITGA6-208ENST00000469534 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
ITGA6-208ENST00000469534 ATP10BO94823 1461 aa8.06□□□□□ -1.12
ITGA6-208ENST00000469534 CCDC18Q5T9S5 1454 aa8.06□□□□□ -1.12
ITGA6-208ENST00000469534 ERBB3P21860 1342 aa8.05□□□□□ -1.12
ITGA6-208ENST00000469534 KIF14Q15058 1648 aa8.05□□□□□ -1.12
ITGA6-208ENST00000469534 SUPT6HQ7KZ85 1726 aaKnown RBP8.04□□□□□ -1.12
ITGA6-208ENST00000469534 MAP3K1Q13233 1512 aa8.03□□□□□ -1.12
ITGA6-208ENST00000469534 EHBP1L1Q8N3D4 1523 aa8.03□□□□□ -1.12
ITGA6-208ENST00000469534 KCNH8Q96L42 1107 aa8.03□□□□□ -1.12
ITGA6-208ENST00000469534 PHLDB1Q86UU1 1377 aa8.02□□□□□ -1.13
ITGA6-208ENST00000469534 ZSWIM6Q9HCJ5 1215 aa8.02□□□□□ -1.13
ITGA6-208ENST00000469534 NCOA2Q15596 1464 aa8.01□□□□□ -1.13
ITGA6-208ENST00000469534 ITGAEP38570 1179 aa8.01□□□□□ -1.13
ITGA6-208ENST00000469534 TRIM26Q12899 539 aaPredicted RBP8.01□□□□□ -1.13
ITGA6-208ENST00000469534 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
ITGA6-208ENST00000469534 UHRF1BP1LA0JNW5 1464 aa8□□□□□ -1.13
ITGA6-208ENST00000469534 PLEKHD1A6NEE1 506 aa8□□□□□ -1.13
ITGA6-208ENST00000469534 KIF3CO14782 793 aa8□□□□□ -1.13
ITGA6-208ENST00000469534 TROQ12816 1431 aaPredicted RBP8□□□□□ -1.13
ITGA6-208ENST00000469534 KDM5BQ9UGL1 1544 aa7.99□□□□□ -1.13
ITGA6-208ENST00000469534 FAM50AQ14320 339 aaKnown RBP7.99□□□□□ -1.13
ITGA6-208ENST00000469534 CDC42BPAQ5VT25 1732 aa7.99□□□□□ -1.13
ITGA6-208ENST00000469534 GPR153Q6NV75 609 aa7.99□□□□□ -1.13
ITGA6-208ENST00000469534 HS6ST3Q8IZP7 471 aa7.99□□□□□ -1.13
ITGA6-208ENST00000469534 TTC37Q6PGP7 1564 aa7.98□□□□□ -1.13
ITGA6-208ENST00000469534 PPP1R37O75864 691 aa7.98□□□□□ -1.13
ITGA6-208ENST00000469534 CDK11AQ9UQ88 783 aaPredicted RBP7.98□□□□□ -1.13
ITGA6-208ENST00000469534 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
ITGA6-208ENST00000469534 CCNB3Q8WWL7 1395 aa7.97□□□□□ -1.13
ITGA6-208ENST00000469534 PTPN23Q9H3S7 1636 aa7.96□□□□□ -1.13
ITGA6-208ENST00000469534 ASXL2Q76L83 1435 aa7.96□□□□□ -1.13
ITGA6-208ENST00000469534 CDC42BPBQ9Y5S2 1711 aa7.96□□□□□ -1.14
ITGA6-208ENST00000469534 C2orf72A6NCS6 295 aa7.96□□□□□ -1.14
ITGA6-208ENST00000469534 TSPOAP1O95153 1857 aa7.96□□□□□ -1.14
ITGA6-208ENST00000469534 ITSN2Q9NZM3 1697 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 MYOM3Q5VTT5 1437 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 MYO5CQ9NQX4 1742 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 WDR7Q9Y4E6 1490 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.95□□□□□ -1.14
ITGA6-208ENST00000469534 RNF166Q96A37 237 aaPredicted RBP7.95□□□□□ -1.14
ITGA6-208ENST00000469534 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 ZNF644Q9H582 1327 aaPredicted RBP7.95□□□□□ -1.14
ITGA6-208ENST00000469534 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
ITGA6-208ENST00000469534 ABCC10Q5T3U5 1492 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms