RNA–Protein interactions for RNA: ENST00000469522.1

SNU13-207, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 2

Gene SNU13, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-207ENST00000469522 TSPY4P0CV99 314 aa18.39■□□□□ 0.53
SNU13-207ENST00000469522 TSPY10P0CW01 314 aa18.39■□□□□ 0.53
SNU13-207ENST00000469522 SHANK2Q9UPX8 1470 aa18.39■□□□□ 0.53
SNU13-207ENST00000469522 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
SNU13-207ENST00000469522 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
SNU13-207ENST00000469522 FAM135AQ9P2D6 1515 aa18.38■□□□□ 0.53
SNU13-207ENST00000469522 APLP2Q06481 763 aa18.37■□□□□ 0.53
SNU13-207ENST00000469522 DAPK1P53355 1430 aa18.37■□□□□ 0.53
SNU13-207ENST00000469522 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
SNU13-207ENST00000469522 CEP170BQ9Y4F5 1589 aaPredicted RBP18.36■□□□□ 0.53
SNU13-207ENST00000469522 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
SNU13-207ENST00000469522 ABCC3O15438 1527 aa18.34■□□□□ 0.53
SNU13-207ENST00000469522 DUOX2Q9NRD8 1548 aa18.34■□□□□ 0.53
SNU13-207ENST00000469522 PZPP20742 1482 aa18.34■□□□□ 0.53
SNU13-207ENST00000469522 CEP152O94986 1710 aa18.32■□□□□ 0.52
SNU13-207ENST00000469522 FBXO31Q5XUX0 539 aaPredicted RBP18.32■□□□□ 0.52
SNU13-207ENST00000469522 ZC3H13Q5T200 1668 aaKnown RBP18.31■□□□□ 0.52
SNU13-207ENST00000469522 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
SNU13-207ENST00000469522 PTPRTO14522 1441 aa18.3■□□□□ 0.52
SNU13-207ENST00000469522 DEPDC5O75140 1603 aa18.3■□□□□ 0.52
SNU13-207ENST00000469522 PRDM15P57071 1507 aaPredicted RBP18.29■□□□□ 0.52
SNU13-207ENST00000469522 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
SNU13-207ENST00000469522 A2ML1A8K2U0 1454 aa18.28■□□□□ 0.52
SNU13-207ENST00000469522 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
SNU13-207ENST00000469522 TNRQ92752 1358 aa18.27■□□□□ 0.51
SNU13-207ENST00000469522 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
SNU13-207ENST00000469522 RRP7BPQ9NSQ0 103 aa18.26■□□□□ 0.51
SNU13-207ENST00000469522 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
SNU13-207ENST00000469522 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
SNU13-207ENST00000469522 LTBP4Q8N2S1 1624 aa18.25■□□□□ 0.51
SNU13-207ENST00000469522 FBXO41Q8TF61 875 aa18.25■□□□□ 0.51
SNU13-207ENST00000469522 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
SNU13-207ENST00000469522 CFAP65Q6ZU64 1925 aaKnown RBP18.24■□□□□ 0.51
SNU13-207ENST00000469522 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
SNU13-207ENST00000469522 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
SNU13-207ENST00000469522 VWDEQ8N2E2 1590 aa18.22■□□□□ 0.51
SNU13-207ENST00000469522 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
SNU13-207ENST00000469522 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
SNU13-207ENST00000469522 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
SNU13-207ENST00000469522 POLR1AO95602 1720 aaPredicted RBP18.2■□□□□ 0.5
SNU13-207ENST00000469522 ANKRD30AQ9BXX3 1397 aa18.19■□□□□ 0.5
SNU13-207ENST00000469522 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
SNU13-207ENST00000469522 FAM50AQ14320 339 aaKnown RBP18.18■□□□□ 0.5
SNU13-207ENST00000469522 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
SNU13-207ENST00000469522 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
SNU13-207ENST00000469522 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
SNU13-207ENST00000469522 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
SNU13-207ENST00000469522 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
SNU13-207ENST00000469522 PKD2Q13563 968 aa18.14■□□□□ 0.49
SNU13-207ENST00000469522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNU13-207ENST00000469522 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
SNU13-207ENST00000469522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNU13-207ENST00000469522 ANKRD50Q9ULJ7 1429 aa18.12■□□□□ 0.49
SNU13-207ENST00000469522 EFCAB6Q5THR3 1501 aa18.12■□□□□ 0.49
SNU13-207ENST00000469522 SYNMO15061 1565 aa18.11■□□□□ 0.49
SNU13-207ENST00000469522 UNC13BO14795 1591 aa18.1■□□□□ 0.49
SNU13-207ENST00000469522 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
SNU13-207ENST00000469522 MED14O60244 1454 aa18.09■□□□□ 0.49
SNU13-207ENST00000469522 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
SNU13-207ENST00000469522 ARHGAP23Q9P227 1491 aa18.07■□□□□ 0.48
SNU13-207ENST00000469522 NOS1P29475 1434 aa18.06■□□□□ 0.48
SNU13-207ENST00000469522 KANK1Q14678 1352 aa18.06■□□□□ 0.48
SNU13-207ENST00000469522 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
SNU13-207ENST00000469522 IQSEC2Q5JU85 1478 aa18.06■□□□□ 0.48
SNU13-207ENST00000469522 TET3O43151 1660 aa18.06■□□□□ 0.48
SNU13-207ENST00000469522 IQGAP1P46940 1657 aa18.06■□□□□ 0.48
SNU13-207ENST00000469522 SLIT1O75093 1534 aa18.05■□□□□ 0.48
SNU13-207ENST00000469522 RRBP1Q9P2E9 1410 aaKnown RBP18.05■□□□□ 0.48
SNU13-207ENST00000469522 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
SNU13-207ENST00000469522 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
SNU13-207ENST00000469522 GCC2Q8IWJ2 1684 aa18.03■□□□□ 0.48
SNU13-207ENST00000469522 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
SNU13-207ENST00000469522 ANKLE2Q86XL3 938 aa18.02■□□□□ 0.48
SNU13-207ENST00000469522 E9PCH4 1651 aa18.02■□□□□ 0.47
SNU13-207ENST00000469522 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
SNU13-207ENST00000469522 LTKP29376 864 aa18■□□□□ 0.47
SNU13-207ENST00000469522 MYO5BQ9ULV0 1848 aa18■□□□□ 0.47
SNU13-207ENST00000469522 ITGAEP38570 1179 aa17.99■□□□□ 0.47
SNU13-207ENST00000469522 IDI1Q13907 227 aa17.99■□□□□ 0.47
SNU13-207ENST00000469522 RPRD2Q5VT52 1461 aaKnown RBP17.99■□□□□ 0.47
SNU13-207ENST00000469522 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
SNU13-207ENST00000469522 ADGRB3O60242 1522 aa17.98■□□□□ 0.47
SNU13-207ENST00000469522 TMEM2Q9UHN6 1383 aa17.96■□□□□ 0.47
SNU13-207ENST00000469522 CPS1P31327 1500 aa17.96■□□□□ 0.47
SNU13-207ENST00000469522 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
SNU13-207ENST00000469522 TMEM131LA2VDJ0 1609 aa17.93■□□□□ 0.46
SNU13-207ENST00000469522 NAIPQ13075 1403 aa17.91■□□□□ 0.46
SNU13-207ENST00000469522 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
SNU13-207ENST00000469522 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
SNU13-207ENST00000469522 LRRC7Q96NW7 1537 aa17.9■□□□□ 0.46
SNU13-207ENST00000469522 NUP155O75694 1391 aa17.9■□□□□ 0.46
SNU13-207ENST00000469522 ZFYVE9O95405 1425 aa17.89■□□□□ 0.46
SNU13-207ENST00000469522 SLC52A1Q9NWF4 448 aa17.89■□□□□ 0.45
SNU13-207ENST00000469522 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
SNU13-207ENST00000469522 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
SNU13-207ENST00000469522 STAG3Q9UJ98 1225 aa17.84■□□□□ 0.45
SNU13-207ENST00000469522 HFM1A2PYH4 1435 aa17.83■□□□□ 0.45
SNU13-207ENST00000469522 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
SNU13-207ENST00000469522 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
SNU13-207ENST00000469522 NWD1Q149M9 1564 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms