RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 PLCH2O75038 1416 aa23.33■■□□□ 1.33
CBX6-203ENST00000469420 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
CBX6-203ENST00000469420 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
CBX6-203ENST00000469420 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
CBX6-203ENST00000469420 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
CBX6-203ENST00000469420 CARD11Q9BXL7 1154 aa23.32■■□□□ 1.32
CBX6-203ENST00000469420 ABCC1P33527 1531 aa23.3■■□□□ 1.32
CBX6-203ENST00000469420 MYT1Q01538 1121 aa23.29■■□□□ 1.32
CBX6-203ENST00000469420 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
CBX6-203ENST00000469420 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
CBX6-203ENST00000469420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.32
CBX6-203ENST00000469420 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
CBX6-203ENST00000469420 DUOX2Q9NRD8 1548 aa23.26■■□□□ 1.31
CBX6-203ENST00000469420 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
CBX6-203ENST00000469420 MAGI2Q86UL8 1455 aa23.26■■□□□ 1.31
CBX6-203ENST00000469420 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
CBX6-203ENST00000469420 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
CBX6-203ENST00000469420 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
CBX6-203ENST00000469420 E9PCH4 1651 aa23.21■■□□□ 1.31
CBX6-203ENST00000469420 EFCAB2Q5VUJ9 269 aa23.21■■□□□ 1.31
CBX6-203ENST00000469420 A2MP01023 1474 aa23.21■■□□□ 1.31
CBX6-203ENST00000469420 PRAG1Q86YV5 1406 aa23.21■■□□□ 1.31
CBX6-203ENST00000469420 ERBINQ96RT1 1412 aa23.2■■□□□ 1.3
CBX6-203ENST00000469420 RBM19Q9Y4C8 960 aaKnown RBP23.19■■□□□ 1.3
CBX6-203ENST00000469420 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
CBX6-203ENST00000469420 ZFYVE16Q7Z3T8 1539 aa23.16■■□□□ 1.3
CBX6-203ENST00000469420 NBPF1Q3BBV0 1214 aa23.14■■□□□ 1.3
CBX6-203ENST00000469420 AFAP1Q8N556 730 aa23.14■■□□□ 1.3
CBX6-203ENST00000469420 ERICH6BQ5W0A0 696 aa23.14■■□□□ 1.29
CBX6-203ENST00000469420 ARAP3Q8WWN8 1544 aa23.14■■□□□ 1.29
CBX6-203ENST00000469420 ABCA9Q8IUA7 1624 aa23.13■■□□□ 1.29
CBX6-203ENST00000469420 ATP10AO60312 1499 aa23.13■■□□□ 1.29
CBX6-203ENST00000469420 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
CBX6-203ENST00000469420 PPP4R2Q9NY27 417 aa23.11■■□□□ 1.29
CBX6-203ENST00000469420 SMG6Q86US8 1419 aaKnown RBP23.1■■□□□ 1.29
CBX6-203ENST00000469420 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
CBX6-203ENST00000469420 LAMC1P11047 1609 aa23.08■■□□□ 1.29
CBX6-203ENST00000469420 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
CBX6-203ENST00000469420 TMC1Q8TDI8 760 aa23.08■■□□□ 1.28
CBX6-203ENST00000469420 DEPDC5O75140 1603 aa23.07■■□□□ 1.28
CBX6-203ENST00000469420 INO80Q9ULG1 1556 aaPredicted RBP23.07■■□□□ 1.28
CBX6-203ENST00000469420 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
CBX6-203ENST00000469420 SENP3-EIF4A1A0A087X0R7 540 aa23.07■■□□□ 1.28
CBX6-203ENST00000469420 PRDM15P57071 1507 aaPredicted RBP23.07■■□□□ 1.28
CBX6-203ENST00000469420 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
CBX6-203ENST00000469420 EIF2AK4Q9P2K8 1649 aaKnown RBP23.05■■□□□ 1.28
CBX6-203ENST00000469420 FANCAO15360 1455 aa23.05■■□□□ 1.28
CBX6-203ENST00000469420 MYBBP1AQ9BQG0 1328 aaKnown RBP23.04■■□□□ 1.28
CBX6-203ENST00000469420 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
CBX6-203ENST00000469420 ATP7AQ04656 1500 aa23.03■■□□□ 1.28
CBX6-203ENST00000469420 SPHKAPQ2M3C7 1700 aa23.03■■□□□ 1.28
CBX6-203ENST00000469420 COL17A1Q9UMD9 1497 aaPredicted RBP23.03■■□□□ 1.28
CBX6-203ENST00000469420 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
CBX6-203ENST00000469420 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
CBX6-203ENST00000469420 KTN1Q86UP2 1357 aaKnown RBP23.02■■□□□ 1.28
CBX6-203ENST00000469420 B4GALNT3Q6L9W6 998 aa23.02■■□□□ 1.28
CBX6-203ENST00000469420 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
CBX6-203ENST00000469420 ANP32EQ9BTT0 268 aa23.01■■□□□ 1.27
CBX6-203ENST00000469420 CEP152O94986 1710 aa23.01■■□□□ 1.27
CBX6-203ENST00000469420 RALBP1Q15311 655 aa23.01■■□□□ 1.27
CBX6-203ENST00000469420 ASXL2Q76L83 1435 aa23.01■■□□□ 1.27
CBX6-203ENST00000469420 CLTCL1P53675 1640 aa23■■□□□ 1.27
CBX6-203ENST00000469420 TRPM2O94759 1503 aa22.99■■□□□ 1.27
CBX6-203ENST00000469420 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
CBX6-203ENST00000469420 MADDQ8WXG6 1647 aa22.98■■□□□ 1.27
CBX6-203ENST00000469420 TET3O43151 1660 aa22.98■■□□□ 1.27
CBX6-203ENST00000469420 TESK2Q96S53 571 aa22.98■■□□□ 1.27
CBX6-203ENST00000469420 VWDEQ8N2E2 1590 aa22.98■■□□□ 1.27
CBX6-203ENST00000469420 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
CBX6-203ENST00000469420 ADGRL1O94910 1474 aa22.97■■□□□ 1.27
CBX6-203ENST00000469420 PARD3Q8TEW0 1356 aa22.97■■□□□ 1.27
CBX6-203ENST00000469420 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
CBX6-203ENST00000469420 PTPRTO14522 1441 aa22.95■■□□□ 1.26
CBX6-203ENST00000469420 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
CBX6-203ENST00000469420 RNF123Q5XPI4 1314 aa22.93■■□□□ 1.26
CBX6-203ENST00000469420 IQGAP1P46940 1657 aa22.92■■□□□ 1.26
CBX6-203ENST00000469420 PER1O15534 1290 aaPredicted RBP22.92■■□□□ 1.26
CBX6-203ENST00000469420 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
CBX6-203ENST00000469420 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
CBX6-203ENST00000469420 KIF3BO15066 747 aa22.88■■□□□ 1.25
CBX6-203ENST00000469420 CC2D1BQ5T0F9 858 aaKnown RBP22.85■■□□□ 1.25
CBX6-203ENST00000469420 MSH5O43196 834 aa22.85■■□□□ 1.25
CBX6-203ENST00000469420 TMF1P82094 1093 aa22.85■■□□□ 1.25
CBX6-203ENST00000469420 PANK3Q9H999 370 aa22.84■■□□□ 1.25
CBX6-203ENST00000469420 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
CBX6-203ENST00000469420 PPRC1Q5VV67 1664 aaKnown RBP22.83■■□□□ 1.25
CBX6-203ENST00000469420 MYT1LQ9UL68 1186 aa22.83■■□□□ 1.25
CBX6-203ENST00000469420 MROH2AA6NES4 1674 aa22.82■■□□□ 1.24
CBX6-203ENST00000469420 SALL2Q9Y467 1007 aaPredicted RBP22.81■■□□□ 1.24
CBX6-203ENST00000469420 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
CBX6-203ENST00000469420 WASHC2CQ9Y4E1 1318 aa22.8■■□□□ 1.24
CBX6-203ENST00000469420 KANK1Q14678 1352 aa22.8■■□□□ 1.24
CBX6-203ENST00000469420 EFCAB6Q5THR3 1501 aa22.8■■□□□ 1.24
CBX6-203ENST00000469420 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
CBX6-203ENST00000469420 KIF1BO60333 1816 aa22.79■■□□□ 1.24
CBX6-203ENST00000469420 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
CBX6-203ENST00000469420 FRMPD1Q5SYB0 1578 aa22.77■■□□□ 1.24
CBX6-203ENST00000469420 ZNF518AQ6AHZ1 1483 aa22.77■■□□□ 1.24
CBX6-203ENST00000469420 CCDC136Q96JN2 1154 aa22.77■■□□□ 1.24
CBX6-203ENST00000469420 ABCA6Q8N139 1617 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms