RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-205ENST00000469154 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-205ENST00000469154 PZPP20742 1482 aa19.58■□□□□ 0.73
SMARCD3-205ENST00000469154 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
SMARCD3-205ENST00000469154 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
SMARCD3-205ENST00000469154 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
SMARCD3-205ENST00000469154 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
SMARCD3-205ENST00000469154 KIF15Q9NS87 1388 aa19.56■□□□□ 0.72
SMARCD3-205ENST00000469154 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
SMARCD3-205ENST00000469154 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
SMARCD3-205ENST00000469154 PPRC1Q5VV67 1664 aaKnown RBP19.56■□□□□ 0.72
SMARCD3-205ENST00000469154 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
SMARCD3-205ENST00000469154 MAST1Q9Y2H9 1570 aa19.54■□□□□ 0.72
SMARCD3-205ENST00000469154 ZNF518AQ6AHZ1 1483 aa19.54■□□□□ 0.72
SMARCD3-205ENST00000469154 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
SMARCD3-205ENST00000469154 C11orf95C9JLR9 678 aaPredicted RBP19.54■□□□□ 0.72
SMARCD3-205ENST00000469154 ERICH6BQ5W0A0 696 aa19.53■□□□□ 0.72
SMARCD3-205ENST00000469154 ANKRD50Q9ULJ7 1429 aa19.52■□□□□ 0.72
SMARCD3-205ENST00000469154 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.71
SMARCD3-205ENST00000469154 RTEL1-TNFRSF6BF6WH68 1400 aa19.5■□□□□ 0.71
SMARCD3-205ENST00000469154 ZFYVE16Q7Z3T8 1539 aa19.5■□□□□ 0.71
SMARCD3-205ENST00000469154 KIF7Q2M1P5 1343 aa19.5■□□□□ 0.71
SMARCD3-205ENST00000469154 ATP7AQ04656 1500 aa19.49■□□□□ 0.71
SMARCD3-205ENST00000469154 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
SMARCD3-205ENST00000469154 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
SMARCD3-205ENST00000469154 MRS2Q9HD23 443 aa19.47■□□□□ 0.71
SMARCD3-205ENST00000469154 KDM5CP41229 1560 aa19.47■□□□□ 0.71
SMARCD3-205ENST00000469154 INO80Q9ULG1 1556 aaPredicted RBP19.47■□□□□ 0.71
SMARCD3-205ENST00000469154 ZBED9Q6R2W3 1325 aa19.46■□□□□ 0.71
SMARCD3-205ENST00000469154 RICTORQ6R327 1708 aa19.44■□□□□ 0.7
SMARCD3-205ENST00000469154 KIDINS220Q9ULH0 1771 aa19.43■□□□□ 0.7
SMARCD3-205ENST00000469154 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
SMARCD3-205ENST00000469154 DUOX2Q9NRD8 1548 aa19.43■□□□□ 0.7
SMARCD3-205ENST00000469154 MLH3Q9UHC1 1453 aa19.43■□□□□ 0.7
SMARCD3-205ENST00000469154 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
SMARCD3-205ENST00000469154 HECW2Q9P2P5 1572 aa19.42■□□□□ 0.7
SMARCD3-205ENST00000469154 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
SMARCD3-205ENST00000469154 KDM5DQ9BY66 1539 aa19.42■□□□□ 0.7
SMARCD3-205ENST00000469154 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
SMARCD3-205ENST00000469154 USP47Q96K76 1375 aa19.4■□□□□ 0.7
SMARCD3-205ENST00000469154 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-205ENST00000469154 IRX6P78412 446 aaPredicted RBP19.4■□□□□ 0.7
SMARCD3-205ENST00000469154 UHRF1BP1Q6BDS2 1440 aa19.4■□□□□ 0.7
SMARCD3-205ENST00000469154 PPP4R2Q9NY27 417 aa19.4■□□□□ 0.7
SMARCD3-205ENST00000469154 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
SMARCD3-205ENST00000469154 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
SMARCD3-205ENST00000469154 PKD2Q13563 968 aa19.38■□□□□ 0.69
SMARCD3-205ENST00000469154 DHX29Q7Z478 1369 aaKnown RBP19.38■□□□□ 0.69
SMARCD3-205ENST00000469154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMARCD3-205ENST00000469154 NUP155O75694 1391 aa19.37■□□□□ 0.69
SMARCD3-205ENST00000469154 YEATS2Q9ULM3 1422 aa19.37■□□□□ 0.69
SMARCD3-205ENST00000469154 A2MP01023 1474 aa19.35■□□□□ 0.69
SMARCD3-205ENST00000469154 KIF3BO15066 747 aa19.35■□□□□ 0.69
SMARCD3-205ENST00000469154 ABCA6Q8N139 1617 aa19.35■□□□□ 0.69
SMARCD3-205ENST00000469154 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
SMARCD3-205ENST00000469154 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
SMARCD3-205ENST00000469154 DIP2CQ9Y2E4 1556 aa19.32■□□□□ 0.68
SMARCD3-205ENST00000469154 FANCIQ9NVI1 1328 aa19.32■□□□□ 0.68
SMARCD3-205ENST00000469154 MAGI2Q86UL8 1455 aa19.31■□□□□ 0.68
SMARCD3-205ENST00000469154 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
SMARCD3-205ENST00000469154 ZNF326Q5BKZ1 582 aaKnown RBP19.29■□□□□ 0.68
SMARCD3-205ENST00000469154 UNC13BO14795 1591 aa19.28■□□□□ 0.68
SMARCD3-205ENST00000469154 E9PCH4 1651 aa19.27■□□□□ 0.68
SMARCD3-205ENST00000469154 FAM135AQ9P2D6 1515 aa19.26■□□□□ 0.67
SMARCD3-205ENST00000469154 GGT6Q6P531 493 aa19.26■□□□□ 0.67
SMARCD3-205ENST00000469154 ATP10AO60312 1499 aa19.26■□□□□ 0.67
SMARCD3-205ENST00000469154 EIF2AK4Q9P2K8 1649 aaKnown RBP19.25■□□□□ 0.67
SMARCD3-205ENST00000469154 POLR3GLQ9BT43 218 aa19.23■□□□□ 0.67
SMARCD3-205ENST00000469154 CARD11Q9BXL7 1154 aa19.23■□□□□ 0.67
SMARCD3-205ENST00000469154 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
SMARCD3-205ENST00000469154 KANK1Q14678 1352 aa19.22■□□□□ 0.67
SMARCD3-205ENST00000469154 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-205ENST00000469154 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
SMARCD3-205ENST00000469154 IQGAP3Q86VI3 1631 aa19.21■□□□□ 0.67
SMARCD3-205ENST00000469154 ARHGEF40Q8TER5 1519 aa19.21■□□□□ 0.67
SMARCD3-205ENST00000469154 MSH5O43196 834 aa19.2■□□□□ 0.66
SMARCD3-205ENST00000469154 MROH1Q8NDA8 1641 aa19.2■□□□□ 0.66
SMARCD3-205ENST00000469154 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
SMARCD3-205ENST00000469154 PRDM15P57071 1507 aaPredicted RBP19.19■□□□□ 0.66
SMARCD3-205ENST00000469154 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
SMARCD3-205ENST00000469154 RNF123Q5XPI4 1314 aa19.17■□□□□ 0.66
SMARCD3-205ENST00000469154 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
SMARCD3-205ENST00000469154 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
SMARCD3-205ENST00000469154 BRD4O60885 1362 aaPredicted RBP19.16■□□□□ 0.66
SMARCD3-205ENST00000469154 WASHC2CQ9Y4E1 1318 aa19.15■□□□□ 0.66
SMARCD3-205ENST00000469154 LAMC1P11047 1609 aa19.15■□□□□ 0.66
SMARCD3-205ENST00000469154 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
SMARCD3-205ENST00000469154 REREQ9P2R6 1566 aa19.15■□□□□ 0.66
SMARCD3-205ENST00000469154 MLECQ14165 292 aa19.14■□□□□ 0.66
SMARCD3-205ENST00000469154 TMC1Q8TDI8 760 aa19.14■□□□□ 0.66
SMARCD3-205ENST00000469154 LRPPRCP42704 1394 aaKnown RBP19.14■□□□□ 0.65
SMARCD3-205ENST00000469154 RALBP1Q15311 655 aa19.14■□□□□ 0.65
SMARCD3-205ENST00000469154 SIGLEC1Q9BZZ2 1709 aa19.14■□□□□ 0.65
SMARCD3-205ENST00000469154 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
SMARCD3-205ENST00000469154 DCAF11Q8TEB1 546 aa19.13■□□□□ 0.65
SMARCD3-205ENST00000469154 ST20-MTHFSA0A0A6YYL1 179 aa19.13■□□□□ 0.65
SMARCD3-205ENST00000469154 AGLP35573 1532 aa19.13■□□□□ 0.65
SMARCD3-205ENST00000469154 CNGB1Q14028 1251 aaPredicted RBP19.12■□□□□ 0.65
SMARCD3-205ENST00000469154 ERICH6Q7L0X2 663 aa19.12■□□□□ 0.65
SMARCD3-205ENST00000469154 KDM2AQ9Y2K7 1162 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms